Salmo trutta (river trout): 115155998
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Entry
115155998 CDS
T08542
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115155998 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115155998 (gtf2e1)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
115155998 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
115155998 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
115155998
NCBI-ProteinID:
XP_029559020
Ensembl:
ENSSTUG00000011697
LinkDB
All DBs
Position
20:complement(38546375..38591210)
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AA seq
453 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGPHREAWSTKG
SSYADLYTQNVEISMGEQEEQQRKQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNSGD
DAGGAQVGVTGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAARALTSSSAARGSD
SESDTSESDEDSPTAPPPVAAAQRRPTGMEMEEEEEDDEFEEVGDDESMVMVGGRSFSYR
EVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctttggacgtccttatccgcaac
ccctgcgtccgcgaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaacacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgcctgctggtc
aatgtggtcaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaaccgggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgaccgggacgttccgctgtacgttctgtcagacggag
gtagaggaggacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacagatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccccgccctcaaacagagtcgggaccgt
gcagcggcggcggcgggtgcagcggctggtccccaccgcgaggcctggtccaccaagggc
tcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggaggag
cagcagcgcaagcaggccagcgaggggaaagcacctagggagagacccgtgtggctgaca
gagagcactgtgcacggaggaacgtacagcgagccagacccgctcaagaactccggagac
gacgcgggaggagcccaggtgggcgtgaccgggctcggaggtggccaatcggacgagaac
gaggaagtgatgcgcgccctgctcatccacgagaagaggagcggggccgggccggcagga
ggcggagccgtagcggcagccagggcactcacctcctcatcagcagccaggggcagcgac
tcggagagcgacaccagcgaatcagacgaggactctcccacggctccgccgcctgtggct
gcggcccagcggcggccgacgggcatggagatggaggaggaggaggaggatgacgagttt
gaggaggtgggggacgatgagtccatggtgatggtgggggggcggtcgttctcctatcgg
gaggtgagccagaggccagagctagtggagaagatgagctctcaggagaaagaggcctac
atcgagatgggacagaacatcttccaggagatgtacttctga
DBGET
integrated database retrieval system
