KEGG   Salmo trutta (river trout): 115156016
Entry
115156016         CDS       T08542                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
stru  Salmo trutta (river trout)
Pathway
stru04382  Cornified envelope formation
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecule (CAM) interaction
stru04518  Integrin signaling
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115156016
   04514 Cell adhesion molecule (CAM) interaction
    115156016
   04518 Integrin signaling
    115156016
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115156016
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115156016
   04810 Regulation of actin cytoskeleton
    115156016
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115156016
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115156016
   04515 Cell adhesion molecules [BR:stru04515]
    115156016
   04090 CD molecules [BR:stru04090]
    115156016
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115156016
  Exosomal proteins of breast milk
   115156016
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin alpha subunits
   115156016
CD molecules [BR:stru04090]
 Proteins
  115156016
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 115156016
NCBI-ProteinID: XP_029559056
Ensembl: ENSSTUG00000013418
LinkDB
Position
20:complement(39039003..39074941)
AA seq 1093 aa
MVLPRRYFPIHVALICLLEWTHISGFNLDTLNVLRKDGEPGSLFGFSLAMHRQLNPSDKT
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYILSQDLTIDASSDEDGGNWRFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLERGFYDDGPY
EVGDENLLDPDLVPVPANSYLGFSIDSGHSITKGRGLTIVSGAPRANHCGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDFGGAVYVYIN
QAGKWDKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTKPAQILEGMPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPVSYSPKLTIRYAFEGEADRRKQGLP
SRILFLNKSRTDQDFQSTGTLDLRGQNKRACIKTKIKLQDNIRDKLRGIPIEVSLGIQGT
KRQKRQNALPQLVPILDNSQPSKVVTEVNFLKEGCGNDHICQSNLQLEYRFCSKELNQDI
FPPLPMENGLPVISLSDQKDIALEVTVKNRNGDDAHEAKLVGMFPNALSYSGFRSQKMTR
DKPVLCLANQNGSQTECELGNPFKTDSEVTFYIILSTAGISLNTAEINIDLELQTTSTQD
KMGRVKAKAKVVIELLLSVAGVARPSQVYFGGDVKGESAIKTEEEIGSLIDYEFKIINLG
KPLKSFGTASLDIQWPKENVDGKWLLYLVKISTTGLEEIPCSPETEINSLKHVQESSTSR
KKREVGGKKSGGNITLLDQKKHKILMCGNGYDARCVVIKCPLQGLDSSAVIALRCRLWNA
TFLENYASFNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVTQYGGVPWWIIV
VAVLAGILMLALLVFLLWKCGFFKRSEHDDSVPRYHAVRIRKEAHRFKDRKAKLDSFEKK
QWMTSWNEHENYS
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggtgctcccgagaagatattttccaattcatgtggcacttatttgtttgctagaatgg
acccatatatcaggcttcaacctggatacattgaatgtcctgaggaaagacggagaaccg
ggcagtttatttggattctctctagccatgcaccggcaacttaatccttcagataaaaca
atactgttgattggagcaccaagagccaaagcactggctaaccagagagccaacataacc
ggtggcctgtacagttgtgacatcaccaccgaatccgatgactgtgaccgcatcgatttt
gacaatgaagaggatgtgagagtggagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgcgctcaccgctatcagagacgtctg
tttgtggacactgctcaggagtcccgcgacatcacaggtcgctgctacatcctgagtcag
gacctcactattgatgcatcctctgatgaagatggagggaactggaggttctgtgagggg
agagccagaggccatgagaggtttggctcctgtcagcaagggctggctgccacgttcacc
aaggactaccactatgtggtgtttggagcgcctggcgcctacaactggaaaggcatagta
cgtgtagagcaaaagaacaacactttgttggaaaggggattttatgatgatgggccttat
gaagttggagatgagaacctcttggatcctgacctggtgcctgtgcctgctaacagctac
ttagggttttccattgattctgggcatagcatcaccaaggggcgtggcctgaccattgtg
tctggggcgccgcgagccaatcactgtggggctgtggtcctgttgagaaaagagaatgaa
gcgtccgcaagactctccccagagtacattctagaagggcctggactggcatcttctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagactttggaggagctgtttatgtctacatcaac
caggcaggaaagtgggacaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggagaacatcggtgacatcaatcaggactcctatcaagacattgct
gttggagcgccctacgctgatgccggggcaggaaaagtatacatttaccatggctctgct
aatggaatcaacaccaagccggcacagatccttgagggaatgcccaacaacatcagatta
tttggatattctctggctgggaatatggatttagataagaattcctatcctgatatagct
attgggtctctctcagatacagttctcgtttacagggcaaggccaattattagcattaag
aaggatgtcaaaattactccaaaggaaattgacttcacaaagaaaacctgtggcaacagc
atctgcttgaccgtggaggcatgtttcacctataaagcaaaccctgtatcctacagccca
aaactaactatccgctacgcatttgagggtgaggcagatcgcaggaagcaagggcttccc
tccaggatcctcttcctcaataagtctcgcaccgaccaggacttccaatcgaccggaact
ctggacctccggggacaaaacaaaagagcttgcatcaagacaaaaatcaaactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtctcattgggaatccagggtacc
aagcggcagaagaggcagaacgctctcccccagcttgtgcctattcttgacaactcccag
ccaagcaaggtcgtcacggaggtgaacttcttaaaggagggatgcggaaatgatcatatt
tgccagagtaacttacaactggagtacagattctgctccaaagagctcaaccaagatata
tttcccccattacctatggagaatgggctaccagtgatatccctcagtgatcagaaggac
atagctctggaggtgacagtgaaaaacagaaatggggatgatgcccatgaggctaagctg
gtggggatgttccccaacgctctctcatactccggtttccgctctcagaaaatgacaagg
gataaaccggttctctgtttagccaatcagaatggctcccaaacagaatgtgaactgggg
aatccattcaaaacagattccgaggttactttctacataatcttgagcactgctggtatc
tctctcaatactgcagaaattaatattgaccttgagcttcaaacgaccagtacacaggac
aaaatgggaagagtgaaagcaaaggctaaagttgtgattgagctgttactttctgttgca
ggagttgcgagaccctcccaggtgtattttgggggtgatgtgaaaggagagagtgccatc
aagacagaagaggagatcggcagtttgattgattatgaatttaagataatcaatttgggt
aagccgttgaagtcctttggcacagcctcgttggacatccagtggcccaaagagaatgtg
gatgggaaatggctgttatatctggttaagatcagcaccactggcctggaagagatcccc
tgctccccagagactgagatcaactctctcaaacacgttcaggagtccagcacatctagg
aaaaagcgtgaagttggaggcaaaaaatctggaggcaacattactttattggaccaaaaa
aagcacaagattttgatgtgtggcaatggctatgacgctagatgtgtggtgatcaagtgc
cctctacagggcttggacagtagtgcagtgattgcgctgcgatgccgtctgtggaacgcg
accttccttgagaattatgcctctttcaactatcttgatataattgtgaaagcttccatc
agccttgatgctcctgcaaagaatatggttctcaggaatgctgagactcaggtgagagtc
accgtgtttccagagaaggcagtaacccagtatggtggagttccctggtggatcatcgtt
gtggctgtcctggctggtattctgatgttggcattgctagtgtttctactctggaagtgt
ggatttttcaaacgttccgaacatgatgacagcgttccaagataccatgctgtacggata
aggaaagaggctcatcggttcaaagacaggaaagccaagctggattcctttgagaaaaag
cagtggatgacaagctggaatgagcatgagaactactcataa

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