Salmo trutta (river trout): 115156020
Help
Entry
115156020 CDS
T08542
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 isoform X1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115156020
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115156020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115156020
NCBI-ProteinID:
XP_029559071
Ensembl:
ENSSTUG00000001310
UniProt:
A0A673VQV0
LinkDB
All DBs
Position
2:complement(46707544..46751391)
Genome browser
AA seq
659 aa
AA seq
DB search
MVQGFSLCFCLALVCLGRCVCSTCPFQCSCFFHKLSDGSKARSVLCNDPEITLVPPNFPT
DTSKLRIEKTAITRISSETFHYLNCLEFLWMSFNSLNSLNVDSFHGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYMKNLTYLDLSSNSLATVPPEVLSMWL
SVKPSQGDGESSKYILGLHDNPWLCDCRLYDVVQFQKSPSSSVTLIDTRLRCADPESLSG
VLFSETELQKCQEPHVHTAVARVRSSLGSNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVRAVSYRDSGKYICKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RKQRGRKTGGFGKAAYQDKLVAKYIPPPTTTATTPIIEPLGPGGFTGKYDTESYDISNSV
ADGQTPGPPITETAMQEVEKEVLSNLAANASSLQAPAPPEKRVVRSVKIIGDTDHTVSLN
WRAPAAKNTTEFSVLYAVFGERDMRRINVAAGKNRITIEGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDI
QESYVTFETLSPGQKPTVMEGEYLARQQPDESNKLLSARSSVESEAICRTEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaggttttagtctgtgtttctgcttggcattagtttgcctcggacggtgtgta
tgcagcacgtgtccgtttcaatgtagctgtttctttcacaaactatcggacggatccaaa
gcaaggagtgtcctttgcaatgacccagagatcactctggtcccacccaactttcctaca
gacacctcaaaactgcggatcgagaagactgccatcacaaggatctccagcgaaaccttt
cactacctcaactgtctggaatttctctggatgtctttcaattctctgaactctttgaat
gtagacagcttccatggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccgacctgaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggcgaccatctatatgaagaacctgacctac
ctggacttatctagcaacagcctggccacggttcctcccgaggttctctctatgtggtta
tctgtgaaaccatctcaaggagatggggaaagttccaaatatattctaggtctccatgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccatca
tcatccgtgactctgatcgacaccaggctgcgctgcgcggacccagagagcctgtcgggg
gtgctgttcagcgagacggagctccagaagtgccaggagccccatgtccacacggctgtg
gcccgggtcaggagctccctggggagcaatgtcctgctgcgctgtgggacaattggagtc
ccagtaccagagctgtcctggacccgggcagatggtaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccatcctgagtgtgcgtgctgtctcttac
agggactctgggaaatacatctgcaaagcgaccaacttcgtgggtactgcagatgccatc
atctccctagttatcacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaacaaaggggacggaaaaccggtgggtttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaaccaccacggcaaccacacccatcatcgaaccacta
ggaccgggcggttttacaggaaagtatgataccgagagctacgatatctcaaacagcgtg
gctgacggacagacgcccggtcctcccatcacggagacggcgatgcaggaagtggagaag
gaggtccttagcaacctggcagccaacgcctcttctttacaggcgccggcaccgccggag
aaacgggtggtgcgttcggtgaagataatcggggacaccgaccacaccgtctccctgaac
tggcgggccccagcggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggc
gagagggacatgcggaggatcaacgttgctgcaggaaagaaccggatcactattgagggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaaaag
gagcagtgtgtaatcttctcaacggatgaggcagccagcgcaagcggcacccagaagctc
attaacgtggtggtgatcacagtggcctgcgtgatcgctgtccccctgacactgatcgtc
tgctgtggggcgctcaagaagcgctgtaaaaagctactggggaggaaatccaaagatatc
caagaatcatatgtgacattcgagaccctctccccgggacagaagcctacggtgatggag
ggggagtaccttgccaggcaacagccagacgagtccaacaaactgctttctgctaggtcc
agtgtggagtccgaggccatttgtaggactgagggaccgcctaacgagtacttttgttga
DBGET
integrated database retrieval system
