Salmo trutta (river trout): 115156028
Help
Entry
115156028 CDS
T08542
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00250
Alanine, aspartate and glutamate metabolism
stru00410
beta-Alanine metabolism
stru00430
Taurine and hypotaurine metabolism
stru00650
Butanoate metabolism
stru01100
Metabolic pathways
Module
stru_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115156028
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115156028
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
115156028
00430 Taurine and hypotaurine metabolism
115156028
Enzymes [BR:
stru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
115156028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
115156028
NCBI-ProteinID:
XP_029559081
Ensembl:
ENSSTUG00000019499
LinkDB
All DBs
Position
20:complement(39313738..39331028)
Genome browser
AA seq
586 aa
AA seq
DB search
MAASAPSSSGGEPDPNSTNLRPPGTSYDAWCGVAHGCTRKLGMKICGFLQKNNNLEEKIS
SFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPDGEGDGIF
SPGGAISNMYSVMTARYKFFPEVKTKGMTAAPRLVLFTSEHSHYSIKKACAALGFGTENL
ILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKLRGVERANSVTWNPHKMMGVPLQCSAILVRERGVLSGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEHHIDKCLDLSH
YLYTKIRDREGYQMVFEGEPQHTNVCFWYLPPGIRDMPDGQERRDRLHKVAPKIKALMME
SGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGHDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccttcctcctctggcggggaaccggatcccaactcgacaaattta
cgaccaccaggcacaagctatgacgcttggtgtggagttgcccatggatgtactagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaataacctcgaggagaagattagt
tccttcaaggaaagatcgtctaaggacctgcttgataacagcgacagggattcccgtttc
agacgcacggagaccgacttttccaatctgtttgctagagatttattaccagccaaaaat
ggagaggagccaaccatgcagttcttgttggaggtggtggatattctcacaaactacgtc
cggaagaccttcgacagatccaccaaggtcctggacttccaccacccccaccagctgctg
gagggcatggagggcttcaacctggagctgtccgaccagcctgagtctctggagcagatc
ctggtggactgcagggataccctgaagtatggcgtgagaacaggccaccccaggtttttc
aatcagctctccactggtttagacatcattgggttagcaggagaatggctcacctccacc
gcaaacactaacatgttcacctatgagatcgccccagtctttgtgctcatggagcagctg
acgctgaagaagatgagggagatcattggctggcctgatggagagggcgatgggatattc
tcaccaggtggagcgatatccaacatgtacagtgtgatgaccgcccgctacaagttcttc
cctgaagtcaagaccaaaggcatgactgctgcccccagactggtgctcttcacctccgag
catagtcactactctataaagaaagcctgtgctgctctgggctttggaacagaaaacctg
atcctgttgagcacagatgagagagggagagtcattcccgctgatttggaagccaaggtc
atcgatgccaaggcgcggggttgtgtcccaatgtttgtgaatgctacagctggttccaca
gtgtatggagcgttcgaccccatccatgagattgcagacatctgcgagaaatacaacatg
tggctacatgttgatggtgcatggggaggaggcctactgatgtccaggaagcacaggcac
aagctgcgtggcgtggagagggccaactcggtcacctggaaccctcacaagatgatgggt
gtgccactgcagtgctctgccattctggtcagagagaggggagttttatcaggctgcaac
tcaatgtgtgctggctacctcttccaacctgacaaacagtacgatgtatcgtacgacacg
ggggataaggccatccagtgtggacgacacgtagatatcttcaaattctggctcatgtgg
aaagcaaagggaacagtagggtttgaacaccacatcgacaagtgcttggacctctcgcat
tatctctatactaaaatcagggaccgtgagggctatcagatggtgttcgagggagagccc
cagcacacgaacgtctgcttctggtaccttccgccaggcattcgcgacatgcccgatggt
caagagaggcgggacaggttgcataaggtggcccccaagatcaaggcgttgatgatggag
tctggaactaccatggtgggctaccagcctcagggagacaaggtcaacttcttccgcatg
gtcatctccaatcctgccgccaccaggtcagatatcgacttcttgaccgatgagattgag
agactggggcatgacttgtga
DBGET
integrated database retrieval system
