Salmo trutta (river trout): 115156041
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Entry
115156041 CDS
T08542
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115156041
Peptidases and inhibitors [BR:
stru01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115156041
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115156041
NCBI-ProteinID:
XP_029559104
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Position
20:complement(39591682..39621811)
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AA seq
1249 aa
AA seq
DB search
MLFPTVTWLLLVAGLLGVWAQDYYEEKTVNKRPRGRGAQLQAAAIATNVQKHNGQAILDE
DCGLELTFLLDSSESAKENHEQEKRFAMDVVDRLQAARLQTGRSLSWKAALLQYSSHVII
EQTFKQWRGTDNFKSHITPIVYIGHGTYTTYAITNMTKMYQEESSPGNIKVAMLLTDGIS
HPRNPDIFSAAADAKNQGVKFFTVGITRAANESANVAQLRLLASSPASRYLHNLQDIDIV
EKVLKEITDLADEGCPPAHQCACEKGERGLSGLAGKKGRPGDDGAPGLKGSKGEGGLSGL
PGRDGEEGKSGYKGERGERGECGTPGMKGDRGPEGPMGARGVRGLQGLPGPQGDIGPEGP
QGKQGDRGPAGPAGIQGENGIGLPGPKGDLGFQGKPGPPGPPGLGEYGQPGPQGPQGFQG
EKGPHGEGLPGPKGDRGLAGPRGPRGQTGAGIKGEKGEFGPPGHPGLVGLTGAGIQGEKG
VEGPRGPPGSRGPQGEGLPGPKGDQGLPGELGATGERGVGEPGPKGEPGTSGLAGLPGFP
GEDGAPGQKGEAGVAGIRGPDGAAGIGTQGEKGDQGQRGIRGLHGPPGMTGPSGAKGEPG
TLGRLGMPGLPGRAIAGPKGDLGPPGPSGPIGETGYGLPGPKGDHGNPGPSGPFGPKGEG
FPGPVGPPGLPGLQGEQGPEGIGIPGPKGDIGFRGLPGLPGPKGKGLQGPPGNIGRKGPP
GPNGPPGEGLQGPKGEQGSQGVTGPRGPIGEGFPGGKGDRGLQGERGNKGVKGSMGDSGV
PGESGRPGVKGEAGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIK
DFVTALVDRTTVGRNATRIGLVLYSLDVKLEFNLARYMTKQDVKRAIRKMSYVGEGTYTS
TAIRKATQEAFYSARTGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNT
SDTTQAEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSQFCEDENGALVLNRNANS
FGRNGNNGYGNNGQGISGHGNNGHGNNGHENNGHGNNEHGNSYNEDPILNPSGRTSSQSH
IRGRGDNFSLPLNAGPLPVQVDDEEGEDLDVRSHVRGGSTVAVVNKTVSIFPARESSNSN
TTVSSSSSGSASSSSGTSGSASSSSEGQFQPVSIPIPNSIFPRESVPLNPRCNLSLDQGT
CREYNIQWYYDKQANSCAQFWYGSCEGNANRFETEDVCKKTCVLSKTAG
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccctactgtgacctggctcctgctggtagcagggctgttgggtgtctgggct
caggactactatgaagagaaaacagtgaacaagagacccaggggcaggggggcccaactg
caagctgcagccattgcaactaacgtacaaaaacataatggacaagccattttagatgag
gactgcggtctggagcttacctttctgctggacagctctgagagtgccaaggagaaccat
gagcaggagaagcgctttgccatggatgtagtggacaggctccaggctgcccgtctgcag
acgggccgcagtctgagctggaaggcggccctgctgcagtacagcagtcacgtcatcatc
gagcagaccttcaagcagtggaggggcaccgacaacttcaagtcccacatcacccccatt
gtctacatcggccacggcacctacaccacctacgccatcaccaacatgaccaagatgtac
caggaggagtccagcccaggcaacatcaaggtggccatgctgctcactgacggcatctcc
caccccaggaatccagacatcttctcagctgccgctgacgccaagaaccagggggttaag
ttcttcacggtgggcataacccgtgcagccaacgagtcagctaacgtggcccagctgcgt
ttgttggccagttcccctgcctcccgatacctccacaacctgcaggatattgacattgtg
gagaaagtcctcaaagaaattactgacctggctgatgaagggtgtcccccggcccaccaa
tgtgcctgtgagaagggcgaaagaggactcagtggcttagccgggaagaagggtcgccct
ggagatgatggagcccctggtcttaaaggatcgaagggagagggaggactaagtggactt
ccaggtcgggatggcgaagaaggaaaatctggttacaaaggagagaggggtgagagaggc
gagtgtggcactccaggaatgaaaggggacaggggtcctgagggcccaatgggcgccaga
ggagtcagaggtctccagggtttacctggtccacagggtgacattggacctgagggccct
cagggaaagcagggtgaccggggtccagctggcccggccggaattcagggagaaaatggt
attggacttcctggtccaaagggtgatctgggattccagggaaaacccggccctcctggt
cctccagggttgggtgaatatggccagccagggcctcaagggccacaaggttttcaaggg
gagaaaggaccccacggagaggggctccctgggccaaagggagaccgggggctggccgga
ccgagggggccaagaggacagacgggtgcaggaatcaaaggagaaaagggtgagttcggg
cctccaggtcatccaggacttgttggacttacaggagcgggcatccagggggagaaggga
gtggagggtcccagaggtccacctggcagcagaggacctcaaggagagggcttacctgga
cctaagggtgatcaaggtttaccaggagagctcggagctacaggggagagaggcgttggt
gagccagggccaaagggtgagcctggtacatctggcctggctggcttacctggttttcca
ggcgaggacggggctccaggacagaagggtgaggcgggtgtagctggtataagaggtcct
gatggagcagcagggatcggcacccagggcgagaagggagaccagggtcagaggggcatc
cgtggattacatggacctcctggcatgaccggaccctcaggggcaaagggggagcctggc
acactgggccgactgggcatgccaggactaccgggacgggccattgcaggtcccaagggt
gatctaggcccacctggtccctctgggccgattggagagacaggctatgggctacctggg
ccaaagggtgaccatgggaatcctggtccatcaggaccttttgggcccaaaggtgaaggt
ttccctggtccagtgggtcctccaggccttccaggtctacagggagagcagggccctgag
ggcattggcatcccaggacctaagggagacattggcttcagaggattgccaggtttgcca
ggcccaaaaggaaagggtttgcaaggaccaccgggtaacattggaaggaaaggaccccct
ggtccaaatgggcccccaggggaaggtctgcagggccccaagggtgagcaggggtctcag
ggtgtgacagggccaaggggacccataggggaaggattccccggaggtaagggtgaccgt
ggcttgcagggtgagagaggaaataagggtgtaaaagggagcatgggagattctggggtt
cctggagagtctggtaggccaggagtaaagggtgaagcagggcttacaagagaagacatc
attaaattgatcaaggaaatatgtggatgtggaatcaagtgcaaggagaggccaatggag
cttgtattcgtcattgacagctcagagagtgttggtccggaaaactttgaaatcatcaag
gacttcgtcacagcactggtggaccgtacaactgttggacgtaacgccaccagaattgga
ctggtcctgtacagtctggatgtcaaactggagttcaatctggcgcgctacatgaccaaa
caagatgtcaagcgggccatcaggaagatgtcctacgtgggtgagggaacctatactagc
accgccatccggaaggctacccaggaggccttctacagtgcccgtactggggttaggaaa
gtggccattgttatcacagatggacagacagacaaacgagagcctgtgaagctggacatt
gctgtgagggaggcccatgctgccaacattgagatgttcgccctggggattgtcaacacc
tcagatacaacccaggctgagttcctccgtgagctcaatctgatcgcctcggaccctgac
agtgagcatatgtacctcatcgacgatttcaacactctaccagctctggagtcaaaactt
gttagccagttctgtgaggatgagaatggagcccttgtgttgaatcgcaacgctaatagc
tttggaaggaatgggaacaacggctatgggaacaacggacaggggattagcggacatggg
aataacggacatggaaacaacggacatgagaataacggacatgggaataacgaacatgga
aacagctataatgaggatcctatcctaaatccaagtggacgcaccagttcccagagtcac
atcagaggccgtggagataacttttctctgcccctcaatgctggaccacttccagtgcag
gtggatgatgaagagggtgaagatttagacgtaaggtcccacgtgcgaggaggtagcact
gtggctgtagttaataaaacagtatccatcttccctgcaagggaaagctccaactccaac
acaactgtctcatcatcatcatcaggatcagcatcatcatcctcaggaacatcaggttca
gcttcatcatccagcgagggccaatttcagcctgtatcaattcctatccctaattctatt
ttcccccgagagtccgtcccgctcaatccccgctgtaacctgagtttggaccaaggcacc
tgtcgagagtataacatccagtggtattacgacaaacaggccaattcctgtgcacagttc
tggtatggaagctgtgaaggaaatgccaaccgttttgagacagaggatgtgtgtaagaag
acctgtgttctgtctaaaacagctggttaa
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