Salmo trutta (river trout): 115156057
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Entry
115156057 CDS
T08542
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115156057 (ttc21b)
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
115156057 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_8
TPR_1
TPR_12
ANAPC3
TPR_6
TPR_7
CFAP70_mid_TPR
CFAP70_TPR_C
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_21
TPR_9
RMD1-3
TPR_Slam
PknG_TPR
TPR_15
Wzy_C_2
TPR_YpiA_C
TPR_Psidin_N
RPN7
ANAPC8
Motif
Other DBs
NCBI-GeneID:
115156057
NCBI-ProteinID:
XP_029559139
Ensembl:
ENSSTUG00000010185
LinkDB
All DBs
Position
20:complement(40167942..40183704)
Genome browser
AA seq
1320 aa
AA seq
DB search
MAEMEDEESMLALINYYCHEKYFNHVLNAAAVAQRKFSNDPIFSFFHAYSTLMQDQIQEA
IHEFEMIKDRRDMSLCTFMALVFAEKKRPNPDRDVIQELDAKVKEDRKSATPKGLYYAGM
FLWLLGRNDKAREYIERMIKVSNGSREGIILKGWIDLTSGKDAYAKKAGKYFDEGLKEKA
DVFALMGKAHYYEYRHNYSGALETVNQVIVSFPGFLPAFIKKMKLLLTLQDWEQTVDAAQ
RLLQRDKNNLEALRMLALHSLCREGDITESLSLLSSLVSNLDAQEPHSPELFYRMSLAFT
RVCGRNEKVIQQTHIMVDRAFSQAQGDSDLATELGYQLVLQGRIKEAMKWYKTAMTLDET
SVSALTGIIRCQLIEGNLEDAEQQLEFLTEIQQSIGKSGELLYLRAMLAVKKRRSQDEVT
NLLNDAVDTHFSTLQGLPLGVDYFEKLNPDFLLEIVKEYIALCPAKPPAQGQPPAPQLQH
CASVLDTVVKIVPGLLQGVFLLAKVRFQSGDIDSAQSSLQHCLDQCPSHAEAHLLMAQIH
LLQGNYKLSSQSLELCLSHNFAVREHPVYHLIKAQAQKKMGELQEAIQTLQMAMILPGVR
RAGASAKSKNKKVELSSADCVSVFLELAEALWLNGEQHEAAKVMQDAINEFSGTPEELRV
TIANADLALLRGDTELALSMLRNITPEQPYYIQAKEKMADIYLNHRKEKRLYASCYRELV
EKLPSPHTYILLGDAYVNIQEPEKAIDIYEQALKKNPKDGALASKIGKALVKTHNYVKAI
NYYEAALKTEQQNFLRYDLAELLMKMRQYERCEKVLQEALAHDPVNELPLLTDDCRYLVL
LAKIQGKVDKNEDALLSLQRARDVQAKVLKRVQLEQPDAVSMQKQLAAEICGEIAKHYTS
LKGYERAVKFYKEALVYCESDGKVMLELARLYLTLDDVDGCQQQCSVLLKSDQVNEDATL
MMADLMFRKQDYEQAVFHFQQLLERKPDNYPTLSRLIDLLRRAGKLEEVPRFLEMAEKHS
SRAKFDPGFNYCKGLYLWYTGEPNDGLRHFNKARKDNDWGQNAVYNMIEICLNPDNDTMG
GEVFENLDGDMGNSTEKQESEQLAVRTAEKLLNELKPQTAGGHVQLRILENYCFLATKQK
ANVEKALNVFTEIANNEKDHVPALLAMATAYMILKQTPRARNQLKRVAKMNWSIVDADEF
EKSWLLLADIYIQSGKYDMAGDLLKRCLRHNKSCCKAYEYMGYIMEKEQAFRDAALNYEM
AWKYGNQTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLDAHPNYPKMRKDILDKARAALRS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatggaggatgaagagtcaatgctggccttgatcaactactattgccacgag
aagtatttcaatcatgtattaaatgctgcagctgtggcacagaggaaattcagcaatgat
ccaatcttcagctttttccatgcctacagcaccctgatgcaagatcaaattcaggaagcc
atccatgagtttgagatgattaaagacagaagagatatgtccctctgtacattcatggct
cttgttttcgctgaaaagaaaaggccaaacccagatcgagatgtcattcaggaactggat
gccaaggtgaaagaggaccgtaaaagtgcaacacctaagggtctctactatgctgggatg
ttcctctggcttctgggacgaaatgacaaagcaagggaatacatagagaggatgatcaaa
gtctctaatggttcccgagaagggattatccttaaaggctggatagatctgacctctggt
aaggatgcatatgccaagaaggctgggaaatactttgacgaaggcctgaaagagaaagca
gatgttttcgctctgatgggaaaggcacattactatgagtatcggcataattattctgga
gctttggagacagtcaaccaagtgattgttagtttccctgggttccttcctgcctttatc
aagaagatgaagcttctattgaccctgcaggactgggagcaaactgtagatgcagcacag
aggctcttgcagagggataaaaacaacctagaagccctgagaatgctcgctcttcactcc
ttatgcagagagggggacatcacagagtcactaagcctgctctcaagtctcgtcagcaac
ttggacgcccaagagcctcacagccctgagcttttctacaggatgtccttggctttcaca
cgggtgtgtggaagaaatgagaaagtgattcagcagactcacatcatggtggacagagcc
ttctcccaagcccaaggggattctgatctggccacagagctgggctaccagttggttctg
cagggaagaatcaaagaggctatgaagtggtacaagactgccatgactctggatgaaaca
agtgtctcggctttgacaggtattatcaggtgccagctgatcgagggaaacttggaggat
gcagagcaacagctggagtttctcacagagatccagcagtctatcgggaaatcaggggag
ctgctgtacctgcgcgccatgctggctgtgaagaaacgcaggtcacaggatgaggtcacc
aacctgctgaatgatgccgtggacacccacttctctacactgcagggcctgccgctgggg
gtagactactttgagaagctcaaccctgacttcctgctggagatcgtcaaggagtacata
gcactctgtcctgctaagcctccagcccagggccagcctcctgcccctcagctccaacac
tgtgcctctgtgttggacactgtggtcaagatagtacctggactcctacaaggtgtcttc
ctattggccaaagttaggtttcagtcaggtgacattgactctgctcagagcagcctccaa
cactgcctggaccagtgtccctctcatgctgaggcccacctgctcatggcacagatccac
ctcttacaaggcaactacaagctctcctcccagtctctggagctttgcctcagtcacaac
tttgcggtccgagagcaccctgtgtatcaccttataaaggcccaggcccagaagaagatg
ggagagctccaagaggccatccagactctgcagatggccatgatcctgccgggggtccgc
agggccggtgcctcagccaaatccaagaacaagaaggtggagctgagctctgctgactgt
gtgtccgtgttccttgaactcgccgaggccctctggctcaacggagaacagcacgaagcc
gccaaagtgatgcaagacgccatcaacgagttctcgggcactcctgaggagctgcgtgtc
accatcgccaatgctgacctggctctgctgcgtggggacaccgagcttgcgctgagcatg
ctcagaaacatcacccctgagcagccctactatatccaggccaaggagaagatggccgac
atatatctgaatcacaggaaagagaagcgcctttatgccagttgttacagagaattagta
gagaagctgcccagtcctcatacatatattttacttggggatgcttatgtgaatatccaa
gagccagagaaggccattgacatctacgaacaggctctgaagaaaaaccccaaagatgga
gctctggccagcaagattgggaaagctctcgtcaagactcacaattacgtcaaggcaatc
aattactatgaagctgctctgaagactgagcagcagaacttcctgcgatatgacctggct
gaactgcttatgaagatgagacagtatgagaggtgtgagaaagttttacaagaggctctc
gcccatgacccagtaaatgagctgccgttgctaaccgatgattgtcgctatctggtcctg
ttggccaagatccaaggcaaggttgacaaaaacgaggatgctttactttccttgcaacga
gcccgggatgtgcaggccaaggtgttgaagcgggtgcagttggagcagccagacgctgtc
tccatgcagaagcagctcgctgcagagatctgtggcgagatcgctaaacactacacgagt
cttaaaggctatgagagagcagtgaaattctacaaagaagctcttgtctattgtgagagt
gatggcaaggtgatgctggagctggcgcggttgtacctcactctagatgatgtggatggc
tgccaacagcaatgcagtgtccttctgaagagtgaccaggtcaatgaagatgcaacactg
atgatggctgacctgatgttcaggaagcaggactatgagcaagccgtcttccactttcag
cagctactggagcgcaaaccagacaactacccaacactgtcacgtctaatcgacctgctg
aggagagctgggaagttagaggaagttcccaggtttctggagatggctgaaaaacattcc
tccagggccaagtttgaccctgggtttaactactgcaaaggactttacctgtggtacaca
ggtgaacccaatgatgggttgcgacacttcaacaaggcacggaaagacaacgactggggt
cagaatgctgtgtacaacatgattgagatctgtcttaacccagacaatgacactatggga
ggagaagtctttgagaacctagatggtgacatggggaactctactgagaagcaggagtca
gagcagctcgccgtgaggacagcagagaagctcctgaatgagttaaagccccagacagcc
ggtggacacgtccaactgcggatcctagagaactactgctttctggccaccaagcagaaa
gccaatgtcgagaaagccctgaatgttttcacagagattgcaaacaatgagaaggaccat
gtgcctgcactgctagccatggcgacagcctacatgattctcaaacaaacccctcgagcc
aggaaccagctcaaacgtgtagctaagatgaactggagcattgttgacgctgacgagttt
gagaagagctggctgctcctggccgacatctacatccagtcagggaaatatgacatggcc
ggggacctcttgaagagatgccttcgccataataagtcatgctgtaaagcttatgagtac
atgggctacattatggagaaggagcaggcattccgggatgcagcgctgaactatgaaatg
gcttggaaatatggaaatcaaacgaaccccacgataggatacaagcttgcattcaactac
ctgaaagcaaagaggcatgttgatgccatagatgtctgtcataaggttttggatgctcac
cccaattatccaaagatgaggaaggacatcttggacaaagctcgggcagctttgcggtct
taa
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integrated database retrieval system
