Salmo trutta (river trout): 115156058
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Entry
115156058 CDS
T08542
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115156058
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115156058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
ATP-synt_B
PFF1_TM
New_glue
Motif
Other DBs
NCBI-GeneID:
115156058
NCBI-ProteinID:
XP_029559140
Ensembl:
ENSSTUG00000010683
LinkDB
All DBs
Position
20:complement(40211135..40254671)
Genome browser
AA seq
1990 aa
AA seq
DB search
MAQLLVPPGPDSFRLFCRDSLDAIERRIAEENAKKPKGKPNDDDDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSIVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIPLNSTDLLNDTLDFNGKEFND
ADFNETIPFNWTNYTNNPDNYYYLPGKRDALLCGNGSGAGLCPEGFWCIKAGRNPDYGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATIEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMAAESGEFSERGDLTETSS
EASKLSSKSAKERRNRRKKRKQREEERENNDKCHRSESESSMKKSHFRFSMDASNLHNYD
MSCSTPYQSFLSIRGPLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRRG
SLFVLRRSDRRSSNVSQNSMPSHVLLPANGKMHSSVDCNGVVSLVGGASLPKSPEGLLLP
EENTTETEYRKARYGSYQATMDFLEDPVARQRALSVASVITNTMEELEESRQKCPPCWYK
FANTFLIWDCCPKWLRIKKIVKMIVMDPFVDLAITICIVMNTVFMAMEHYPMSGEFNTML
YVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGLANVSGMSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDSV
CKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVIGN
LVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVRRSFQSICLR
KKKRSLNEDKTLDDLHKTMGTNWNSNHTTVEIMKDPEYIKDGNGATSGLGVGVGSNAAGK
YIMNDNTDYMPFIHNASLTVTVPIAVGESDLNTEDFSSDSSDIEESKEQLSEDHPMSSSE
GSTVDIRPPGEGAGSVDMEPEESMEPEGCFTDGCVRRFQCCQVNDDEAKWKMWWTLRKTC
FRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFTYIFILEMLLKW
VAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITTQERFKVRDVA
NKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPVYEV
NLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDEQTDDMDEILYK
INLVFIVMFTGECILKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYFVSPTLF
RVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV
RKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSRKEHPGSKYKGG
DCGNPPVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEK
FDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIHCLDILFAFTKR
VLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALVIQRAFRRYLLRRI
VKRASAMYKEKMLLDKEVLVIDKFNEISTSDRTDMTPSTASPPSYDSVTKPEKNKYEKDK
REKEVKKKKK
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggaccagacagcttccgcctgttttgtcgtgactcc
cttgatgccattgagaggcggattgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatgacgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatacggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaaccagaaaacctttatagtattgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaagccccttcaaccctcttagaagaatatca
attaaggtactggttcactcattgttcagcatagtaatcatgttcactatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatatagagtacacattc
actggaatttatacatttgaatctcttataaaaatattggcaaggggcttttgtgtcggg
aagttcacctttctacgagatccatggaactggttggatttctgtgttattgtcatggca
tatgtcacatcgtttgtggacctgggcaatgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaactatatcggtcatcccaggcctgaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctggtagggctgcagctgtttatgggcaatttaagaaacaaatgtttaaggatccct
cttaactcaaccgacctcttgaatgatacattggactttaatgggaaggagtttaatgat
gcggactttaacgagaccatcccgttcaactggaccaattacactaataatcctgataat
tattactacctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggattctggtgcatcaaagcgggccggaacccagactacggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtacatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggctgtggtcgcc
atggcgtacgacgagcagaaccaggccaccatcgaggaggctcagaagaaggaggaggag
ttccaggccatgctggagcagctgaggagacagcaggaggatgcacaggcggcggcaacg
gtgatggcggctgagagtggggagttcagtgagagaggggacctcactgagacctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggagagagagaacaatgacaagtgtcacaggtctgagtccgaaagc
agtatgaaaaagagtcacttccgcttctccatggatgcctctaacctgcacaactatgac
atgagctgttcaacaccataccagtccttcctgagtatccgcggacccctgttctcgtcc
agacggaacagccgggctagcctctacagcttccgggaccgtgcgcgggacataggctcg
gagaacgactttgccgacgacgagaacagcactttcgaggacaacgacagtcgccggggc
tctctgtttgtccttcggcggagcgaccggcgctccagcaacgtgagccagaacagcatg
ccatcacacgtcctgctgccagcaaatgggaagatgcacagctccgtcgactgcaacggg
gtggtgtccctagtgggcggggcttcactccccaagtcacctgagggactccttctgcca
gaggaaaacactacagagacagagtatagaaaggcccgatatggatcgtaccaggccact
atggacttcctggaagacccagttgccaggcagagggcgctcagtgtagctagtgttata
accaacaccatggaagaacttgaagaatcgagacagaagtgccctccttgctggtacaag
tttgccaacaccttcctcatctgggactgttgtccgaagtggctgaggatcaagaaaata
gtcaagatgatcgtgatggacccgtttgtagacctagctatcaccatatgtattgttatg
aacacagtgttcatggctatggagcattacccaatgtctggggagttcaacaccatgctt
tatgtgggaaacctggtgttcacgggtattttcacagctgagatgtgtttcaagattatt
gctttggatccatacatttattttcaggaaggctggaatatatttgatggtatcattgtc
agtttgagcttgatggagcttggcttggccaacgtgtctggaatgtctgtcctcagatca
ttccgattgctgagagtattcaaactggctaagtcttggcccacactgaacatgctgatc
aagatcattggtaactcagtgggggccttgggtaatctcaccctcgtactggccatcatc
gtcttcatcttcgccgtggtgggcatgcagctttttgggaagagctacagagacagtgtg
tgtaagatctctacagactgcacactgccccggtggcacatgcatgacttcttccactcc
ttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgtatg
gaggtggctggtcagagcatgtgtctcatcgtcttcctgatggtcatggtcatcgggaac
ctagtggtcctgaatctgttcctggccttgctgctgagctcgttcagtgctgataacctg
gcggccacggatgatgacagcgagatgaacaatctgacggtggccataggccgcatccac
cagggcatcgccttcgtcaaggccttggtacgtcgctctttccaaagcatctgtctgagg
aagaagaagaggagcctgaacgaggacaagaccctggatgacctccacaaaaccatgggg
accaactggaactccaaccacaccacagtggagatcatgaaagaccctgaatacataaag
gatggcaatggcgccaccagtgggttgggagtgggggtgggcagcaatgcagcagggaag
tacataatgaatgacaacactgactatatgccgttcatccacaacgccagcctgaccgtc
acggtgcctatcgctgtgggagagtcggacctcaacactgaggacttcagcagcgattcc
tcggacatagaagaaagcaaagagcagctatctgaagaccatccgatgagctcctcagag
ggcagtacagtggacattaggcccccaggtgagggagcgggctcagtggacatggagcct
gaggagtccatggaacctgaaggctgcttcactgatggatgtgtccgcagattccagtgc
tgccaagtgaacgatgatgaggccaagtggaagatgtggtggactttgagaaaaacctgt
tttaggatagtggagcacaactggttcgaaagctttatcatcttcatgatcctgctcagc
agtggagcgctggcatttgaggacatctacatcgagaagaggaagactattaagactgtg
ttggagtttgcagacaaagtcttcacctacatcttcatcctggagatgttgctgaagtgg
gtggcctatggattcgctaaatacttcaccaacgcttggtgctggctggacttcctcatt
gtcgacgtgtctcttgtcagccttgtggccaacgccctgggctacgctgagctgagtgcc
atcaagtccctgaggactctacgagcactgaggccactgagagcgctgtcccgctttgag
ggcatgagggtggtggtcaacgctctgctcggagccatcccctccatcttcaatgtgctg
ctggtctgcctcatcttctggctcatcttcagtatcatgggcgtcaacctgtttgcaggg
aaatactaccattgtgtcaacatcaccacacaggagcgcttcaaagttagagacgtagct
aacaagacagaatgtttggctttggaaggtgcctactggaagaatgtcaagatcaacttt
gataatgtgggagcaggctatctggcactgttacaagtggctacattcaaaggctggatg
gacatcatgtatgcagctgtggactctcgcaatttggaagatcaacccgtctatgaagtt
aatctgtacatgtatatgtactttgtggtattcatcatatttggatccttctttacactc
aacctcttcattggtgttattatagacaacttcaatcagcaaaagaaaaagtttggaggt
caagacatcttcatgacagaggaacagaagaaatactacaatgctatgaagaagcttggc
tcaaagaaaccccaaaagcctatccctaggccagcgaacaagtttcaaggatatgtcttt
gatttcattacaaagcaagccttcgacattgtcatcatgattcttatatgccttaatatg
gtcaccatgatggtggagacggacgagcagacagacgacatggatgaaattctctacaag
atcaacctggtgtttattgtcatgtttaccggagagtgtattctgaagatgttctcactc
cgccaatactacttcaccattgggtggaatgtatttgacttcattgttgttatcctgtcg
ataattggtatgtttctgtctgaactgatagagaagtactttgtttcaccaaccttattc
cgagtcattcgactggcccggattggtcgcatccttcgcctcatcaagagtgccaaggga
atccgtacactcttgtttgctttgatgatgtcacttcctgccttgttcaatattggtctc
ctgctcttcttagtgatgtttatctatgccatctttggcatgtcgaactttgcatacgtc
aggaaggagtctgggattgatgacatgttcaactttgagacatttggcaacagcatgatt
tgcctgttccagatcaccacgtcagctggctgggacggcctgctggcacccatcctaaac
aagagagagccagactgtgacagccgtaaagagcacccaggcagcaagtacaagggggga
gactgtgggaacccccctgtagccattatcttctttgtgagctacatcataatctgtttc
ctcattgtggtcaacatgtacattgctgtcatcctggagaacttcagtgtggccactgag
gagagcgctgagcccctgagcgaggatgactttgagatgttctacgaggtctgggagaag
tttgatgcacgggccacccagttcatggagtatgagaagctgtctgacttcgctgatgcc
ttggaccccccgctacgcatctctaagcccaacaagatccagttgatctacatggatttg
cccatggtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaagcgc
gtcctgggtgagggcgaaggcttggacatcctccggggtcaaatggaggagcgctttatg
gcctccaacccctccaaggtgtcctacgaacccatcaccaccacgctacgccgcaaacaa
gaagacatgtctgcgctggtaattcagagagctttcagacgatatctgctcagacgtatt
gttaaacgggcctctgccatgtacaaagagaagatgctccttgataaagaggttctcgtc
atagacaaatttaacgagatctctacttcagacagaactgacatgacaccctccacagcc
tctcccccatcatatgacagtgtcacaaaaccagagaaaaacaaatatgaaaaagacaag
agagagaaggaggtgaagaagaaaaagaagtga
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