Salmo trutta (river trout): 115156217
Help
Entry
115156217 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115156217
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115156217
09158 Development and regeneration
04382 Cornified envelope formation
115156217
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115156217
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115156217
03036 Chromosome and associated proteins [BR:
stru03036
]
115156217
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115156217
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115156217
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115156217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
115156217
NCBI-ProteinID:
XP_029559493
LinkDB
All DBs
Position
20:complement(50139633..50207552)
Genome browser
AA seq
580 aa
AA seq
DB search
MEVNNMPSPQVLQPVLKMKVDELFLNWLSEPTTQTILKDYLGLIKSGQSIDLGLGDTKDK
RSMTFNENNNVASKRSLTERSSAPLGAPSSSPSTHTLPSGSSGNARVVGPNGRALRRSVS
TKKAQVKSEAPVPTALSESIPKFYFPRGRPKANLNIDGLIAKIEKIFSQFPNERATIEDM
GKVAKACECPLYWKAPLFNSAGGDRTGFVSVHKFVAMWRKMLQTCHDDVSKFVHLLAKPG
CNYLEQEDFIPFLQDVVNSHTGLAFLKEASDFHSRYITTVAQRIFYNVNRSWSGRISCSE
LRKSSFLQNVALLEQEEDVNQLTEFFSYEHFYVIYCKFWELDTDHDLYIDQRDLARHNDQ
AISHKMIERIFSGTVTRDRRLRKDGRLSYADFVWFLISEEDKKTDTSIEYWFRCMDLDGD
GVLSMYELEYFYEEQCVKLETMAIEPLPFEDCLCQMLDLVRPEVEGKITLRDLKQCKLSH
IFYDTFFNIEKYLDHEQKDPFSVVREAETEGQEISDWEKYAAEEYDILVAEETTTDQYND
RYDNALSHISSELGLRTEERHFFEIPNPHCNLDLDEDDFE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaacaacatgccatcgccacaagtcctgcaaccggtgcttaaaatgaaagtg
gatgagcttttcctcaactggttgagtgagccaacgacccagacgatactcaaagactac
ctcggcctgatcaagagtggacagagcattgacctggggcttggggacactaaggacaaa
aggtcgatgaccttcaatgagaacaacaatgtggcgtccaagagaagtctgacggagagg
tcttctgcacccctcggtgcgccttccagctccccctctacacacacactaccctctggg
agcagtggtaacgccagagtagtgggacccaatgggagggcgctacggaggtctgtcagc
actaaaaaggcccaggtgaagagcgaggcgcctgttcccacggcgctgagtgaaagcatt
ccaaagttctactttccgcgggggcggcccaaagccaacctcaacatcgacggcctcatt
gctaagatcgagaaaatattttcccaattccccaatgaaagggccaccattgaggacatg
gggaaggttgccaaggcgtgcgagtgtcctctctactggaaagctccattgttcaattcg
gctggaggcgataggacgggcttcgtgtccgttcacaagtttgtggccatgtggagaaaa
atgctgcagacctgtcatgacgacgtgtctaagtttgtacacctcttggccaaacctggc
tgtaattacctggaacaagaggactttattccattcctgcaggatgtggtgaactctcac
acaggcctggccttcctgaaggaggcgtccgacttccactcacgctacatcaccacagtt
gcccagaggatattctacaatgtgaacaggtcatggtcaggcaggatcagctgttcagag
ctcaggaaaagcagctttctccagaacgtggccctgctagagcaggaggaggacgtgaac
cagctgacagagttcttctcctacgaacatttctacgtcatctactgcaagttctgggag
ctggacacagaccatgacctctacatagaccagagagacctggcccgacacaacgaccaa
gctatctcccacaagatgattgaaagaatattttctgggacagttaccagggatagacgt
ctgcgtaaagacggtaggctgagctacgctgactttgtctggttcctcatctccgaagaa
gacaagaagactgacaccagtatagagtactggttccggtgtatggacctggatggggac
ggtgtgttgtctatgtacgagctggagtatttctatgaggagcagtgtgtgaagttggag
accatggcaatcgagcccctgcccttcgaggactgtctctgtcagatgctcgacctggtc
aggccggaggtcgagggaaagatcaccctacgggacctgaagcagtgtaagctgtctcac
atcttctatgacaccttcttcaacatcgagaaatacctggaccacgagcagaaagacccc
ttctctgttgtaagggaggctgagacagagggccaggagatctcggactgggaaaaatat
gcagcggaggagtacgacatcctggttgccgaggagactactactgatcagtacaacgac
aggtatgacaatgctctgagtcacatctccagtgaattgggtctgaggacagaggagaga
catttctttgagatccccaatcctcactgcaatctggacttggatgaggacgactttgaa
tga
DBGET
integrated database retrieval system
