Salmo trutta (river trout): 115156260
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Entry
115156260 CDS
T08542
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04382
Cornified envelope formation
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04518
Integrin signaling
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115156260
04518 Integrin signaling
115156260
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115156260
09142 Cell motility
04820 Cytoskeleton in muscle cells
115156260
04810 Regulation of actin cytoskeleton
115156260
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115156260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115156260
04515 Cell adhesion molecules [BR:
stru04515
]
115156260
04090 CD molecules [BR:
stru04090
]
115156260
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115156260
Exosomal proteins of bladder cancer cells
115156260
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115156260
CD molecules [BR:
stru04090
]
Proteins
115156260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_Teneurin
PSI_integrin
FN3_DSCAM-DSCAML_C
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115156260
NCBI-ProteinID:
XP_029559582
LinkDB
All DBs
Position
2:48535720..48570181
Genome browser
AA seq
2003 aa
AA seq
DB search
MGRWTLHLLVGVVLAVLTASSYAEKVNHCLAARANTCSACIQSGKGCAYCPDEIFDGPRC
DLLENIIDHGCTGAVTAEGSLSMEKNQKIDMLMKRSQVAPQDMSMTLLPGEEREIEMEVF
EPAKGPLDLYILMDFSNSMKDDLDNLKRMGAELAELVGKLSDDYTIGFGKFVDKVVEPQT
DMRPTKLAQPWPNSDPPFSFRNVITLTSDLQSFTQKLQKERISGNLDAPEGGFDAILQAT
VCGEKIGWRDHATHLLVFSTESAFHYESDGANVLAGIMPRNDEQCHLDNDGKYTEDTSQD
YPSVPTLVRLLGKHNIIPIFAVTNYSFTYYEKLHEYFPIAELGLLQEDSANILNIMEKAF
ENIRSKISIRAEDRPKAIEAQVLSYSGNVAQTGTFKVKPGQIGKFKVRVKANEMVGEQHV
CSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKNPFPNAVRCTGHGDLVCGKCKC
NDGWLGPFCNCSASASTDPGTSCRGPGVEEPCSGRGDCLCGTCVCYNTDQYEGPLCQFDK
SQCQRFGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVCKCGR
CECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDKCDQCQFKVVMVEE
LKENKEVIEACSFRDEDDDCTYHYTVDYPEDQAVKELEVQVLKKKECPPAGFLWLIPLIM
FLMLLLGLLSLCCWKYCACCKSCLALLPCCGRGRTVGFKENQYMLRQSMLTSDHLDTPLV
RTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTDSLSRSDAR
DTELLRREVDDNLNEVYKQVPGTQRVQNTTFRLQRNAGKRSDHAIVDTVLSAPRSSYPNI
VKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVHVPLFVKEEDDDKK
QLQVEAVDVPLGIAEIGKRFVSITIIKEHAKSVMSFLQPSYTYSRQDKVANIPITREIIE
DGHAQVSYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLEMGEGDGLLKDTQVKQ
FVMDLSNPRQGAKLGRYPRTTVTITDKPEPSVVMFMKSTQNFSTADPTYSIPVVRTRNKE
GPATVHWRTRNAKRFELSGPLKFGPGETEKNIVIDPRSHPGPVKPESFQLELFDPSTKAV
VGERKTTMVTITDGGLPDNAQMEKSAGFINQTATSPGGRLNSPTNVKAKATGPRSIRLNW
DPLGKSLGYKVKYWIYGDPEADAPPAMNVKTTHADLANLYPYCDYETKVCGYNALGDGNY
SEMVPCKTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITAYEVLYTPINDDTKPM
GAAKKVKIDNPKKRMLLIENLQSAQTYCYQVRAKNSVGWGPFKEATINLASQPTRPMSIP
IIPDIPIVDAEAGDEYDGYLMYSSEVMRSPTDSKRPSVSDEEPMNGRLEQNFLFPGGNNS
MSRSANMSTSSYSQVSPMSTLSSSHRGGAGGSMSMESTTTYLSGQGGNSLSRTQVIGGGT
RTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTDGQSTYGFSPTQTQSQYDYG
MSQAFWATTQSEDVNDALLNLDRVLQDARLAPGVPDTPTRLVFSALGPTALKISWQEPHC
DRDVLGYCVLYQLLNGGDVKRINMSSPAENSVVVQDLLPNHSYLFKVKAQSQEGWGPERE
GVITIESAVDPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILG
YVVTCEHLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIIT
IESQDDGSISQLGGLGGMSQLGGLGSMSQQGGLGGMSQQGGLGGMSQQGGLGGMSQYSSQ
SLTKRDVYQLPTEGSTRTNVTHTMINDPYYSGDGMMMVGKTTQHTETSGMVTRHVTKEVV
QRSVQVAGTSSVTKKVERSFYET
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctcttggtgggggttgtacttgctgtcctcacggcgagt
agctacgctgaaaaagtaaaccactgtctggctgcaagggctaacacctgttcagcatgt
atccagtcagggaagggctgtgcctactgcccagacgagatctttgatggaccccgctgt
gaccttctggagaacatcatagaccacggctgtactggcgcggtgacggcggaaggcagt
ctgtcaatggagaaaaaccagaagattgacatgttgatgaagcgctctcaggtggccccc
caggatatgtccatgactctgctgccaggggaggagagagagattgagatggaggtgttt
gaaccagcgaaaggacctctcgacctctatattctcatggacttctccaactccatgaag
gatgatttggacaacctcaaaaggatgggtgctgagctggctgagttggtggggaagctg
tctgatgattacaccatcggtttcggcaaatttgtggacaaggtggtggagccccagaca
gacatgagaccgaccaaactggcccagccgtggcccaacagcgaccctcccttctcgttc
cgaaatgtgatcactctgacctctgacctgcagtccttcacccagaagctgcagaaggag
aggatctcaggcaacctggatgctccagaggggggcttcgacgccatactgcaggctaca
gtctgcggggaaaagattggctggcgtgaccatgccacccacctcctggtcttctccacc
gagtcggccttccactacgagagtgacggtgccaacgtgctggctggcatcatgccacgc
aatgacgagcagtgccacctggacaacgatgggaaatacacagaggacaccagtcaggac
tacccctctgtgcccaccctggtccgtctgctgggcaaacacaacatcatccccatcttt
gccgtcacaaactactccttcacctactatgagaagcttcatgagtatttccccatcgct
gagctgggcctgctacaggaagactctgctaacatcctcaatatcatggagaaagctttc
gagaatatccgttctaagatcagtatccgtgctgaggatagacctaaagctatagaagct
caggtcctgtcttacagtggcaatgttgcacaaacaggaaccttcaaagtcaagcctggg
caaatagggaagtttaaggtgcgtgtcaaggccaatgagatggttggggaacagcatgtg
tgtagtctggagcagggtgacaaaaaagggaagatgagagtcaaaccaacaaccttcagc
acagctctaaacatcaacgctgaagtgctctgtaaaacctgcgactgtgagaagaatcca
tttccaaacgcagtgaggtgtacaggccatggagacctggtctgtgggaagtgcaagtgc
aacgacggctggctgggtccattctgtaactgctctgccagcgcgtcgacggatccgggc
acttcctgtcggggtcctggcgtggaggagccgtgttctggccgaggagattgcctgtgt
ggaacgtgtgtttgttacaacacggaccagtacgagggacccctctgtcagtttgacaag
tcccagtgtcaacgattcggaggtttcctctgcaacgaccgtggtcgctgcttcatgggc
cagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaaccag
acctgtctggacactaaagggggtgtctgtaacgggcggggtgtgtgtaagtgtggtcgt
tgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccaggcc
cagctggggatgtgtgaggacaaaaggagctgtgtccagtgtcaggcctggaagaccgga
gagaagaaggacagcgacaagtgcgaccagtgccagttcaaagtggtcatggtggaagag
ctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgaggatgatgactgt
acttaccactacaccgtggactatcctgaggaccaggctgttaaggagctggaggtccag
gtgctcaagaagaaagagtgtccccctgctggcttcctgtggttgatccctctcatcatg
ttcctcatgctactgctgggtctattgtcgctctgctgttggaagtactgcgcctgctgc
aagtcctgtcttgctttgctgccatgctgtggaagaggtcgtacggttggctttaaggaa
aatcagtacatgctccgccaatccatgctcacctctgaccacctagacacgccactagtg
aggaccggcccacccaagagcaccgacgtggttcgctggaagatcaccgacaatgtccac
cgatcgcccaatcatccgcttgcgcaggttcagcccaaccccaaagagaccatccagttc
cctctgtctctgcgtctgaacaggttgttcacagacagtctgtctcgctccgacgccaga
gacactgagttgctacgcagggaggttgatgacaacctgaatgaagtgtacaagcaggtt
cctggcacccagagagttcagaacaccacatttagattacagagaaatgctggtaaaaga
tctgaccacgccatcgtagacactgttctgtctgctcctcgctccagctaccccaacatc
gtcaaactgactgagaaaaacgtccagtctggcaacttccaggatctcaaagtggtgccg
ggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggagggg
gtagagacggtggatgtgcacgtgccgctcttcgtcaaggaggaagatgatgataagaag
cagctgcaggtggaggcggtggacgttcctctgggcatcgctgagatagggaaacgcttc
gtcagcatcactatcatcaaagaacacgccaagagtgttatgtcgttcctccagccttcg
tacacctacagccgacaggacaaagtggctaacatccccattactagagagatcatagag
gatggacacgcacaggtcagctaccgcacccgagacctcaccgccaaggacaagaaggac
tatgtgacagtggatggggaactgtcctacgggccaggggagacccagcagactgtccct
gttcgtttgttggagatgggagagggagatggtctgctgaaggacacacaggtcaaacaa
tttgtcatggacctcagtaacccaagacagggtgcaaagctgggacgctaccccagaacc
accgtcaccatcactgacaaaccagagcccagtgtggtgatgtttatgaagagcacccag
aacttctccaccgccgacccaacctactccatccccgtggtccgcacccgcaataaggag
gggcccgccaccgtccactggaggacccgcaacgctaaacgcttcgagctgtccggcccc
ctaaagtttggtcccggggaaacagagaagaacatcgtgatcgatccacgctctcaccct
ggcccggtaaaaccagagtccttccaactggaactgtttgaccccagtacgaaagctgtg
gtcggagagaggaagacaacgatggtcactattactgatggaggacttccagacaatgcc
cagatggagaagagtgcgggcttcatcaaccagacagccacgtcccctggtggtcgtctc
aactctcccaccaacgtgaaggccaaagccaccggcccccggagcattcgccttaactgg
gaccccttaggaaaatccctgggctacaaggtgaagtattggatctatggggatcctgag
gctgacgccccccctgcaatgaacgtgaagacaacccatgctgacctggccaacctgtac
ccctattgtgactacgagacgaaggtgtgtggctacaatgccctgggagatggaaactac
agcgagatggtgccctgtaagaccctggaggatgtccccagtgagcccggtcgtctggcg
tttaatgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagaccaat
ggtgtcatcaccgcctacgaggttctctacacgcccatcaatgacgacacgaagccgatg
ggtgcagctaagaaggtgaagatagacaaccctaagaagaggatgttgctgattgagaac
ctgcagtcggcccagacttactgctatcaggtccgggctaagaacagcgtgggttggggt
cccttcaaagaagcgaccatcaacctggcctcccagcccaccagacccatgtccatccct
atcatcccagacatccctatagtggacgcggaggcgggtgatgagtacgacggctacctg
atgtacagcagtgaggtcatgagatcgccaacagactccaagagacccagcgtctcagac
gaagaaccaatgaacggcaggttggaacagaacttcctcttccccgggggaaacaattcc
atgtcgcgcagtgccaacatgtctacatccagctacagccaggtgtctcccatgtccacc
ctcagctccagccaccgagggggggccggggggtccatgtccatggagtccaccacaaca
tacctctctggacaaggaggaaactctctctcccgcactcaggtgattgggggcgggacg
cgcacggagaatgttgtcatgaggaagcgatcagagaacagaggttactatgagtatgac
gacaacatccgagattccatcgtcataggagacctgtccagtggattgtctggatacaca
gatggccaaagtacgtatggcttcagtcccactcagacacagagtcagtacgactacggt
atgtctcaggccttctgggccacgacccagtctgaggatgtcaacgatgcactactgaac
ctggacagggtgctccaggatgctcgtttggcccctggggtccctgacacccccaccaga
ctggtgttctctgccctgggcccaactgccctgaagatcagctggcaggagccccactgt
gacagggatgttttagggtactgtgttctctaccagctgctcaatggaggtgatgtgaag
cgtataaacatgtccagccccgcagagaactccgtggtggtgcaggacctgctgcctaat
cattcctacctgttcaaggtgaaggctcagagtcaggaaggctggggaccggagagggag
ggagtcatcaccatagagtcagctgtcgaccccaacagcccactcagcccaatgccaggt
tctcccttcactctcagtacccccagtgctccaggccccctggtgttcacagctctgtcc
cccgaggcactgcagctgagctgggagaaaccccgcaaacccaacggagacatcctgggc
tacgtggtcacctgtgaacatctgcacggaggaggtgacatgcgttccttccaggtgagc
ggtgacagcgctgagaccagtctgacagttccggacctgagtgagaacatgccgtacaag
ttcaaagttcaggccaggacgacccagggcttcggccccgagagggagggcattatcacc
atcgagtctcaggatgacggtagcatatctcaactaggaggcctaggcggtatgtctcaa
ctaggaggcctaggcagtatgtctcaacaaggaggcctaggcggtatgtctcaacaagga
ggcctaggcggtatgtctcaacaaggaggcctaggcggtatgtctcagtacagcagtcag
tccttgaccaagagagatgtgtaccaacttcctacagagggcagcacacgcaccaacgtc
acacacaccatgatcaacgacccatactactcaggagatggtatgatgatggtggggaag
acgacccagcacacagagaccagcggcatggtgacacgtcatgtgacgaaggaggtggtg
cagaggagcgtgcaagtggccggcaccagcagcgtcaccaagaaggtcgagaggtccttc
tacgagacctga
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