Salmo trutta (river trout): 115156260
Help
Entry
115156260 CDS
T08542
Name
(RefSeq) integrin beta-4-like isoform X1
KO
K06525
integrin beta 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115156260
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115156260
09142 Cell motility
04820 Cytoskeleton in muscle cells
115156260
04810 Regulation of actin cytoskeleton
115156260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115156260
04515 Cell adhesion molecules [BR:
stru04515
]
115156260
04090 CD molecules [BR:
stru04090
]
115156260
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115156260
Exosomal proteins of bladder cancer cells
115156260
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115156260
CD molecules [BR:
stru04090
]
Proteins
115156260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_Teneurin
PSI_integrin
Ig_DSCAM-DSCAML_C
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115156260
NCBI-ProteinID:
XP_029559582
Ensembl:
ENSSTUG00000005444
LinkDB
All DBs
Position
2:48535720..48570181
Genome browser
AA seq
2003 aa
AA seq
DB search
MGRWTLHLLVGVVLAVLTASSYAEKVNHCLAARANTCSACIQSGKGCAYCPDEIFDGPRC
DLLENIIDHGCTGAVTAEGSLSMEKNQKIDMLMKRSQVAPQDMSMTLLPGEEREIEMEVF
EPAKGPLDLYILMDFSNSMKDDLDNLKRMGAELAELVGKLSDDYTIGFGKFVDKVVEPQT
DMRPTKLAQPWPNSDPPFSFRNVITLTSDLQSFTQKLQKERISGNLDAPEGGFDAILQAT
VCGEKIGWRDHATHLLVFSTESAFHYESDGANVLAGIMPRNDEQCHLDNDGKYTEDTSQD
YPSVPTLVRLLGKHNIIPIFAVTNYSFTYYEKLHEYFPIAELGLLQEDSANILNIMEKAF
ENIRSKISIRAEDRPKAIEAQVLSYSGNVAQTGTFKVKPGQIGKFKVRVKANEMVGEQHV
CSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKNPFPNAVRCTGHGDLVCGKCKC
NDGWLGPFCNCSASASTDPGTSCRGPGVEEPCSGRGDCLCGTCVCYNTDQYEGPLCQFDK
SQCQRFGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVCKCGR
CECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDKCDQCQFKVVMVEE
LKENKEVIEACSFRDEDDDCTYHYTVDYPEDQAVKELEVQVLKKKECPPAGFLWLIPLIM
FLMLLLGLLSLCCWKYCACCKSCLALLPCCGRGRTVGFKENQYMLRQSMLTSDHLDTPLV
RTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTDSLSRSDAR
DTELLRREVDDNLNEVYKQVPGTQRVQNTTFRLQRNAGKRSDHAIVDTVLSAPRSSYPNI
VKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVHVPLFVKEEDDDKK
QLQVEAVDVPLGIAEIGKRFVSITIIKEHAKSVMSFLQPSYTYSRQDKVANIPITREIIE
DGHAQVSYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLEMGEGDGLLKDTQVKQ
FVMDLSNPRQGAKLGRYPRTTVTITDKPEPSVVMFMKSTQNFSTADPTYSIPVVRTRNKE
GPATVHWRTRNAKRFELSGPLKFGPGETEKNIVIDPRSHPGPVKPESFQLELFDPSTKAV
VGERKTTMVTITDGGLPDNAQMEKSAGFINQTATSPGGRLNSPTNVKAKATGPRSIRLNW
DPLGKSLGYKVKYWIYGDPEADAPPAMNVKTTHADLANLYPYCDYETKVCGYNALGDGNY
SEMVPCKTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITAYEVLYTPINDDTKPM
GAAKKVKIDNPKKRMLLIENLQSAQTYCYQVRAKNSVGWGPFKEATINLASQPTRPMSIP
IIPDIPIVDAEAGDEYDGYLMYSSEVMRSPTDSKRPSVSDEEPMNGRLEQNFLFPGGNNS
MSRSANMSTSSYSQVSPMSTLSSSHRGGAGGSMSMESTTTYLSGQGGNSLSRTQVIGGGT
RTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTDGQSTYGFSPTQTQSQYDYG
MSQAFWATTQSEDVNDALLNLDRVLQDARLAPGVPDTPTRLVFSALGPTALKISWQEPHC
DRDVLGYCVLYQLLNGGDVKRINMSSPAENSVVVQDLLPNHSYLFKVKAQSQEGWGPERE
GVITIESAVDPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILG
YVVTCEHLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIIT
IESQDDGSISQLGGLGGMSQLGGLGSMSQQGGLGGMSQQGGLGGMSQQGGLGGMSQYSSQ
SLTKRDVYQLPTEGSTRTNVTHTMINDPYYSGDGMMMVGKTTQHTETSGMVTRHVTKEVV
QRSVQVAGTSSVTKKVERSFYET
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctcttggtgggggttgtacttgctgtcctcacggcgagt
agctacgctgaaaaagtaaaccactgtctggctgcaagggctaacacctgttcagcatgt
atccagtcagggaagggctgtgcctactgcccagacgagatctttgatggaccccgctgt
gaccttctggagaacatcatagaccacggctgtactggcgcggtgacggcggaaggcagt
ctgtcaatggagaaaaaccagaagattgacatgttgatgaagcgctctcaggtggccccc
caggatatgtccatgactctgctgccaggggaggagagagagattgagatggaggtgttt
gaaccagcgaaaggacctctcgacctctatattctcatggacttctccaactccatgaag
gatgatttggacaacctcaaaaggatgggtgctgagctggctgagttggtggggaagctg
tctgatgattacaccatcggtttcggcaaatttgtggacaaggtggtggagccccagaca
gacatgagaccgaccaaactggcccagccgtggcccaacagcgaccctcccttctcgttc
cgaaatgtgatcactctgacctctgacctgcagtccttcacccagaagctgcagaaggag
aggatctcaggcaacctggatgctccagaggggggcttcgacgccatactgcaggctaca
gtctgcggggaaaagattggctggcgtgaccatgccacccacctcctggtcttctccacc
gagtcggccttccactacgagagtgacggtgccaacgtgctggctggcatcatgccacgc
aatgacgagcagtgccacctggacaacgatgggaaatacacagaggacaccagtcaggac
tacccctctgtgcccaccctggtccgtctgctgggcaaacacaacatcatccccatcttt
gccgtcacaaactactccttcacctactatgagaagcttcatgagtatttccccatcgct
gagctgggcctgctacaggaagactctgctaacatcctcaatatcatggagaaagctttc
gagaatatccgttctaagatcagtatccgtgctgaggatagacctaaagctatagaagct
caggtcctgtcttacagtggcaatgttgcacaaacaggaaccttcaaagtcaagcctggg
caaatagggaagtttaaggtgcgtgtcaaggccaatgagatggttggggaacagcatgtg
tgtagtctggagcagggtgacaaaaaagggaagatgagagtcaaaccaacaaccttcagc
acagctctaaacatcaacgctgaagtgctctgtaaaacctgcgactgtgagaagaatcca
tttccaaacgcagtgaggtgtacaggccatggagacctggtctgtgggaagtgcaagtgc
aacgacggctggctgggtccattctgtaactgctctgccagcgcgtcgacggatccgggc
acttcctgtcggggtcctggcgtggaggagccgtgttctggccgaggagattgcctgtgt
ggaacgtgtgtttgttacaacacggaccagtacgagggacccctctgtcagtttgacaag
tcccagtgtcaacgattcggaggtttcctctgcaacgaccgtggtcgctgcttcatgggc
cagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaaccag
acctgtctggacactaaagggggtgtctgtaacgggcggggtgtgtgtaagtgtggtcgt
tgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccaggcc
cagctggggatgtgtgaggacaaaaggagctgtgtccagtgtcaggcctggaagaccgga
gagaagaaggacagcgacaagtgcgaccagtgccagttcaaagtggtcatggtggaagag
ctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgaggatgatgactgt
acttaccactacaccgtggactatcctgaggaccaggctgttaaggagctggaggtccag
gtgctcaagaagaaagagtgtccccctgctggcttcctgtggttgatccctctcatcatg
ttcctcatgctactgctgggtctattgtcgctctgctgttggaagtactgcgcctgctgc
aagtcctgtcttgctttgctgccatgctgtggaagaggtcgtacggttggctttaaggaa
aatcagtacatgctccgccaatccatgctcacctctgaccacctagacacgccactagtg
aggaccggcccacccaagagcaccgacgtggttcgctggaagatcaccgacaatgtccac
cgatcgcccaatcatccgcttgcgcaggttcagcccaaccccaaagagaccatccagttc
cctctgtctctgcgtctgaacaggttgttcacagacagtctgtctcgctccgacgccaga
gacactgagttgctacgcagggaggttgatgacaacctgaatgaagtgtacaagcaggtt
cctggcacccagagagttcagaacaccacatttagattacagagaaatgctggtaaaaga
tctgaccacgccatcgtagacactgttctgtctgctcctcgctccagctaccccaacatc
gtcaaactgactgagaaaaacgtccagtctggcaacttccaggatctcaaagtggtgccg
ggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggagggg
gtagagacggtggatgtgcacgtgccgctcttcgtcaaggaggaagatgatgataagaag
cagctgcaggtggaggcggtggacgttcctctgggcatcgctgagatagggaaacgcttc
gtcagcatcactatcatcaaagaacacgccaagagtgttatgtcgttcctccagccttcg
tacacctacagccgacaggacaaagtggctaacatccccattactagagagatcatagag
gatggacacgcacaggtcagctaccgcacccgagacctcaccgccaaggacaagaaggac
tatgtgacagtggatggggaactgtcctacgggccaggggagacccagcagactgtccct
gttcgtttgttggagatgggagagggagatggtctgctgaaggacacacaggtcaaacaa
tttgtcatggacctcagtaacccaagacagggtgcaaagctgggacgctaccccagaacc
accgtcaccatcactgacaaaccagagcccagtgtggtgatgtttatgaagagcacccag
aacttctccaccgccgacccaacctactccatccccgtggtccgcacccgcaataaggag
gggcccgccaccgtccactggaggacccgcaacgctaaacgcttcgagctgtccggcccc
ctaaagtttggtcccggggaaacagagaagaacatcgtgatcgatccacgctctcaccct
ggcccggtaaaaccagagtccttccaactggaactgtttgaccccagtacgaaagctgtg
gtcggagagaggaagacaacgatggtcactattactgatggaggacttccagacaatgcc
cagatggagaagagtgcgggcttcatcaaccagacagccacgtcccctggtggtcgtctc
aactctcccaccaacgtgaaggccaaagccaccggcccccggagcattcgccttaactgg
gaccccttaggaaaatccctgggctacaaggtgaagtattggatctatggggatcctgag
gctgacgccccccctgcaatgaacgtgaagacaacccatgctgacctggccaacctgtac
ccctattgtgactacgagacgaaggtgtgtggctacaatgccctgggagatggaaactac
agcgagatggtgccctgtaagaccctggaggatgtccccagtgagcccggtcgtctggcg
tttaatgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagaccaat
ggtgtcatcaccgcctacgaggttctctacacgcccatcaatgacgacacgaagccgatg
ggtgcagctaagaaggtgaagatagacaaccctaagaagaggatgttgctgattgagaac
ctgcagtcggcccagacttactgctatcaggtccgggctaagaacagcgtgggttggggt
cccttcaaagaagcgaccatcaacctggcctcccagcccaccagacccatgtccatccct
atcatcccagacatccctatagtggacgcggaggcgggtgatgagtacgacggctacctg
atgtacagcagtgaggtcatgagatcgccaacagactccaagagacccagcgtctcagac
gaagaaccaatgaacggcaggttggaacagaacttcctcttccccgggggaaacaattcc
atgtcgcgcagtgccaacatgtctacatccagctacagccaggtgtctcccatgtccacc
ctcagctccagccaccgagggggggccggggggtccatgtccatggagtccaccacaaca
tacctctctggacaaggaggaaactctctctcccgcactcaggtgattgggggcgggacg
cgcacggagaatgttgtcatgaggaagcgatcagagaacagaggttactatgagtatgac
gacaacatccgagattccatcgtcataggagacctgtccagtggattgtctggatacaca
gatggccaaagtacgtatggcttcagtcccactcagacacagagtcagtacgactacggt
atgtctcaggccttctgggccacgacccagtctgaggatgtcaacgatgcactactgaac
ctggacagggtgctccaggatgctcgtttggcccctggggtccctgacacccccaccaga
ctggtgttctctgccctgggcccaactgccctgaagatcagctggcaggagccccactgt
gacagggatgttttagggtactgtgttctctaccagctgctcaatggaggtgatgtgaag
cgtataaacatgtccagccccgcagagaactccgtggtggtgcaggacctgctgcctaat
cattcctacctgttcaaggtgaaggctcagagtcaggaaggctggggaccggagagggag
ggagtcatcaccatagagtcagctgtcgaccccaacagcccactcagcccaatgccaggt
tctcccttcactctcagtacccccagtgctccaggccccctggtgttcacagctctgtcc
cccgaggcactgcagctgagctgggagaaaccccgcaaacccaacggagacatcctgggc
tacgtggtcacctgtgaacatctgcacggaggaggtgacatgcgttccttccaggtgagc
ggtgacagcgctgagaccagtctgacagttccggacctgagtgagaacatgccgtacaag
ttcaaagttcaggccaggacgacccagggcttcggccccgagagggagggcattatcacc
atcgagtctcaggatgacggtagcatatctcaactaggaggcctaggcggtatgtctcaa
ctaggaggcctaggcagtatgtctcaacaaggaggcctaggcggtatgtctcaacaagga
ggcctaggcggtatgtctcaacaaggaggcctaggcggtatgtctcagtacagcagtcag
tccttgaccaagagagatgtgtaccaacttcctacagagggcagcacacgcaccaacgtc
acacacaccatgatcaacgacccatactactcaggagatggtatgatgatggtggggaag
acgacccagcacacagagaccagcggcatggtgacacgtcatgtgacgaaggaggtggtg
cagaggagcgtgcaagtggccggcaccagcagcgtcaccaagaaggtcgagaggtccttc
tacgagacctga
DBGET
integrated database retrieval system
