Salmo trutta (river trout): 115156299
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Entry
115156299 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor-like
KO
K23215
bcl-6 corepressor
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115156299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115156299
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
115156299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
115156299
NCBI-ProteinID:
XP_029559610
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All DBs
Position
20:29588858..29644791
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AA seq
2002 aa
AA seq
DB search
MLSATQMYGTVPPWMSHERAQMYGMVMEERRVPVSDAGTQRNLDLREGNHITQSMVDARL
TPLAAMGLDRNALMRDGLRLHGSVVYPGIRALSAEKPHEGSTTLPLSYNRDGLPDLLYKP
DVSMDRSKPTNGYLDLYKSPPPSLHRGPEGLDRRGVGPGGEKPSELGLGGAGAGAGGYLR
LPWGLSRGLYPEAGLYPYMDSSKYAALSMYKAQFLNQPSPYLPQHLAYQSLCASQGGNMN
PAAASAAERLYYMPPYPPSPISSPLVGSPMRIPAVSVAPTSMVHCQEKGLSVGSRVHHEG
SPFGQQLHQRHLRPSTFSPPHTDRDRDRPPSRSNKPSRPPSNKGASNSSGSSSSSSGGSS
GGSNTNSSSLPIDSSPRASSRLPQPAPPLPPPHIDSTMDLQRAVSRIVPLSPSSCSSSQT
IPHSFYVSSMAPENPSPARPSPHKPRPRDGVSDHRAGGCEKRPSQCPSKPSSERPAPLNQ
PPTTKDPADPKPLDLSGRLLELGLPPNSFPVKMEALGSPGPRYGPPPSRELLKETLSLSP
PSLPSHSLSVVSSTSSKAPERPEMISTLHSSWVVPTLTPTYTIGSTHAHPHPPALSPSPR
PSPDTQGKGSSPSVIKNKALERVLPQPQQRSPSCPRVGETNTTPIPSNLNPPSTIPLSPK
PNNDWPKPSPSQSESSPMAGHHRNSTEKPPKAPKRAETSQEVSPYNKRPCLENANGHPPS
HLYLPQSEAYLPHSMVYANRYLHYSVPDGMALHSLPLPGKGPAYPSPVLLGSNSLYPSHL
AAKQPVPYQSHAGEYLTYNSQEMAHPLMHTHTDSKALERADQGPKSRGQGQDKPRGLKED
FGGSHRGRCDVETGEGSHVKRNKDAGEWGGSQPRPLSSSSTSIPSKDRIVCIDLVHSDTD
GESTPAANKPPLPVIVPITRGNQHQCGHGDQSMREVEREPEHQLHHHHHHHLHHHPSPSS
TLRTTHTDRQPETPCMRPRPLQETGCPGVASSPLQGSPGLVTRAEESREDQSPSSDPRDQ
GEQVKSTLRCARTSGDRKTRDRTLGDCDRTAVDRTTGDSGRMPGDRMSRDRISSCDLTSG
EEREEMDRRTSSHPILRYMDLGKEREREGGSVEDTEESHGEGDEDEEGGRRGSRRTSLTK
RIANSSGYVGDRIKCVTTELYADSSKLSREQRALQMEVISREGSNISRPAANWERAMMRF
SELELKEKECGGVCVSASAAVAGQQLADRQRREREWEHCQHTARQGEREGGRQDYGNNRV
PVLQRCGGQRESLYPGQEAWEGARDGAREGEGWRCSPPVLALADRHPQEKGGQGMVPIRK
HTHSLQKGEEEGEKSSEKARMTSDACVLWGSEQPMAPTTNEDDDEEVRKLKVCIELKGLR
LRKPTASSPERPEVKEERTWSSHHSPSFLPRTLPPTPTWSPAHALPPRDRKFKVDPEVKP
LSQKPEITKSWAREMLANGDAKRVGLLPSTQQRDRSAPQGPLMGQGCDWGSKEPRRGGLG
VKTEGQCLPPSAPEPPTEDTASLKPRCHSDTDKPKGKRPCKTKHISQRERERRRELLNGS
SNQHGSTDLGAALEDKVSEQCARRKRPSSPLHYLGSPVKPCSRATRPPSVPPQVNGSGPV
PPDGAGVRRAPPAEPPVVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCVENRVC
EVNHRDYAGYCALHEACARGWLSIVIHLLEHGADINCSAQDGTRPLHDAVENDHLDVVRV
LLSYGADPTLATYSGRGLLKMTHSDSMERFLTDYFADLQGRSNDDPEIYWEFYGSTVCES
LEGGSVCDVLADPPGPEDKDRRELFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRR
LRMSARSFRSSFPHMEVVTMAEAEFYRQASLSQLFSCPDELEGFQPDSKELLDLVEGSAE
LAALLGSNLECLDDRWDEPPEANANVDEKANVNENIRAMANANSNVNAKVNGNIRAMAKG
NISAKTNGSTHVKAKANANRRS
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgctacacagatgtacggaacggttcccccatggatgagtcacgagagggcc
caaatgtatgggatggtcatggaggagaggagagtacctgttagtgatgcggggacccag
agaaacctggatttaagagaaggcaaccacatcacacaaagcatggtggatgccaggcta
acgcccctggccgccatggggctggaccgcaatgccttgatgcgggacggcctccgcctg
cacggcagcgtagtctacccagggatccgagcgctgtcggccgagaagccccacgagggg
tccaccaccctccccctcagctacaaccgggacggccttccagacctcctctacaagcct
gacgtttccatggaccggagcaagcctaccaacggctacctggacctgtacaagagccct
ccaccaagcctccatagggggccagaagggctggacaggagaggtgtgggacctgggggg
gagaagccctcagagctgggcctggggggtgctggtgcaggagcaggcgggtacctgcgt
ctgccctgggggctgagccgggggctgtaccccgaggcgggcctctacccctatatggac
tcttccaagtatgcggccctcagcatgtacaaggcccagttcctcaatcagcccagcccc
tacttgccccagcacctggcctaccagtctctctgtgcctcccagggggggaacatgaac
cctgctgctgcctccgccgccgagaggctctactacatgcccccctaccccccgtccccc
atctcctcccccctggtggggtctcccatgaggatcccagcggtgtcggtggcccccacc
tccatggtgcactgccaggagaagggattgagtgtcgggtctcgtgtccaccacgagggg
tctccgtttgggcagcagcttcaccagcgccacctccgccccagcaccttctcccccccc
cacacagacagagaccgagacagaccccccagcagaagcaataagcccagtagacccccc
tccaacaaaggagccagtaacagcagtggtagtagtagtagtagtagtggtggtagcagt
ggtgggagtaatactaatagtagtagccttcctattgattcctcccctcgcgcctcttct
cgcctcccccagcctgctcctcccctgcctccccctcacatagacagcaccatggaccta
cagagggcagtctctagaatagtaccattatctccctcctcttgttcctcttcccagacg
atacctcactcgttctatgtgagcagcatggctccagagaacccctcccctgcccggccc
agcccccacaaacccagacccagagatggggtgtcggatcacagggctgggggatgtgag
aagagacccagtcagtgcccttccaaaccatcctctgagcgtccagccccactgaaccag
ccgccgactaccaaagacccagcagacccaaagcctctcgacctctctggaagattgttg
gagttaggcctgcctcctaacagcttccctgtgaagatggaggctctggggtccccgggg
cctcggtacggacctccccccagccgggagctcctgaaagagaccctctctctctcaccc
ccctccctaccctcccactccctctcagtggtcagcagcacttcctccaaagccccagag
aggccggagatgatcagcactttgcactcctcctgggtggtgcccacccttacacccacc
tacaccattgggtccacccacgcacacccccaccccccagccctgtccccatcccccagg
cccagcccagacacccaagggaaaggctcctctccatctgtcatcaaaaacaaggctctg
gagagagtcctaccccagccccagcaacgcagtccatcctgccccagggtaggagagaca
aatactaccccaataccttccaatctcaatcctccctccacaatacccttgtcccccaaa
cccaataatgattggcccaaacccagccccagccaatcagaaagttcccccatggccggc
catcataggaactccacagagaagccccccaaagcccctaagagggctgagacatcccag
gaggtgtctccatataataaacgtccgtgtctagagaatgccaatgggcacccacccagc
cacctctacctgccccagagcgaggcctacctacctcacagcatggtgtacgccaaccga
tacctgcactactctgtacccgacggcatggccctccactctctccctctgccagggaag
ggccctgcctacccatcccccgtcctgcttggcagtaacagcctttacccctcccacctg
gcagccaaacagcccgtaccgtaccagagccacgctggggagtacctcacctacaactcc
caggagatggcccaccctctgatgcacacacacacagactctaaagccttagagcgggca
gatcaggggcccaagtcacgtggccagggccaggacaaacctaggggactcaaagaggat
tttggtgggtcccacaggggccggtgtgatgtggagacaggggaggggtcccatgtgaag
cgcaataaagatgcaggggagtggggagggagccagcccagacccctgtcctcctccagc
accagtatcccttccaaagatagaatcgtctgcattgacctcgtacactccgacacagat
ggagagtccacgccagccgccaacaagccgccactccctgtcatcgttcccatcaccagg
ggcaaccaacaccagtgtggccatggcgaccaaagcatgagggaagtggagcgggagcca
gaacaccaactgcatcatcatcatcatcatcatcttcatcaccaccccagcccaagctcc
accctgagaactacccacacagacagacaaccagagaccccctgtatgagacccaggccc
ctccaggagacgggctgtccgggtgtggcctctagcccacttcagggctccccaggactg
gttactcgggccgaggagagccgcgaggaccagagcccttcctcagacccaagggaccag
ggggagcaggtcaaaagcaccctgcgctgtgcccgcacatctggggaccgcaagacgaga
gaccggactcttggagattgtgatcgcactgcagtagaccgtaccactggtgatagtggc
cgcatgcctggcgaccgcatgtctagagatcgcatatcatcttgcgacctcacgtctgga
gaggagagagaagagatggacagacgaacctcctcccaccccatccttcgctacatggac
ctggggaaggaaagagaaagagaaggagggagcgttgaagacacagaggagtcacatgga
gagggggatgaggacgaagagggtggacgaagaggctcacggaggaccagtctgaccaag
aggatcgctaactcttcaggctacgtcggcgaccgcatcaaatgtgtcacaaccgagctg
tatgcagactctagcaagctgagtcgggaacagcgcgccctgcagatggaagtcatatca
cgagaggggagtaatataagtcgccctgcagctaactgggagcgggcgatgatgcggttc
tcggagctggagctgaaggagaaggagtgcgggggtgtgtgtgtgtctgcgtcggcagcg
gtagcaggacagcagttggcagaccgccagcggagagaaagagagtgggaacactgccaa
cacaccgccaggcagggagagagggagggtggaaggcaggactatgggaacaacagagtc
ccagtcctccagaggtgtgggggccagagggagagcctgtacccagggcaggaggcctgg
gagggggctagagatggtgccagagagggtgagggttggcgatgttcacccccagtcctg
gcactggcagaccggcacccccaggagaagggtgggcagggcatggtacccattaggaaa
cacacacacagcctacagaagggagaggaggaaggagaaaagagctcagagaaggccaga
atgacttcagatgcgtgtgtactgtggggcagtgagcaacctatggctcccactactaat
gaggatgatgatgaagaggtgaggaagctgaaggtgtgtatcgagctgaaggggctccgc
ctccgcaagcccaccgcttcctcccccgagaggccagaggtcaaagaggagaggacatgg
tcatcacatcacagcccctccttcctgccccggaccctccccccgaccccaacctggagc
ccagcccatgccctgccccctcgggacaggaagttcaaggttgatccggaagtgaaacct
ctgtcacagaagccagagatcacaaagagctgggccagagagatgctggctaatggagac
gctaaacgagttggactgctcccttcaacacagcagagggacagatctgccccccagggg
cccctcatggggcaaggatgtgactggggatccaaggagcctaggagaggagggctgggg
gtgaagactgagggtcagtgcctccccccctcggcccctgagccccccaccgaagacacc
gcctctctcaagccccgttgtcatagcgacacggacaaacccaagggcaagcggccgtgc
aagaccaaacacatcagccagagagagagggagcggaggagagagctgctgaacggcagc
agcaaccagcatggaagcactgatctgggagcagctttggaggacaaggtcagtgagcag
tgtgctcggaggaagagaccctcttcgcccctccattacctcggttctccggtcaagccc
tgttcccgcgcaacgcggcccccttccgtaccccctcaggtgaacggctctgggcctgtc
ccaccggatggagcaggggtgaggagggccccgcctgctgagcctcccgtggtgcggccc
atccccccagaggcacggagactaatcgtcaataagaacgctggagagacgctgttacag
agagcagcacggctcggatacgaggaggtggtgctgtactgcgtggagaaccgtgtgtgt
gaggtgaaccacagggactatgcaggctactgtgccctccacgaggcctgcgcccgcggc
tggctctctatagtcatacacctgctggagcacggggccgacatcaactgcagtgcacag
gatggcaccaggcctctgcatgacgcggtggagaatgaccatctggacgtagtgcgtgtg
ttgctgtcctacggggctgaccctactctagccacctactccggccgcggtctgctcaag
atgacccacagcgacagcatggagcgattcctcactgattattttgctgacctgcagggc
cgctctaatgatgacccagaaatctattgggaattctatggcagcactgtgtgtgagtcg
ttagaggggggcagtgtgtgtgacgtactggcggaccccccagggccggaggacaaggac
aggagggagctctttgagtttgagttctccgaccgacccctcctcccctgctacaacatc
caggtgtccctgtcacaggggcccaggaactggcttctcctctcagatgttctccggcgg
ctgcgaatgtctgcccgttccttccgctcctccttcccccacatggaggtcgtgacgatg
gccgaggcagagttttaccgccaggcatctctctcccagctcttctcctgcccagatgag
ctggagggcttccagcctgacagcaaggagctgctggacctggtggaggggagtgctgaa
ctggccgctctgctgggttctaatctggagtgcctcgacgaccgctgggacgaacccccg
gaggctaacgctaatgttgacgaaaaggctaatgtcaatgagaacattagggctatggct
aatgctaacagtaacgttaacgctaaggtcaatgggaacattagggctatggctaaaggt
aacattagtgctaagactaatggtagcacccatgttaaagctaaggctaacgctaacaga
aggtcgtga
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