Salmo trutta (river trout): 115156301 Help Entry 115156301         CDS       T08542                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism stru  Salmo trutta (river trout) Pathway stru04382   Cornified envelope formation stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115156301  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115156301   09142 Cell motility    04820 Cytoskeleton in muscle cells     115156301  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115156301  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115156301    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115156301 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115156301 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115156301 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115156301 NCBI-ProteinID:  XP_029559611 LinkDB All DBs Position 20:28739267..28853819 Genome browser AA seq 1683 aa AA seqDB search MKFEVRMSGTMQTRHQIELKSLKFLFLFLSVAILASGVDAGGKKQSGPCGGRDCSGGCKC FPEKGARGQPGPLGPQGPQGPPGSLGDPGVQGVQGEKGDRGRGGFIGPKGSVGMTGVPGF SGSDGIPGHPGQAGTRGKPGADGCNGTHGDSGLSGKPGNDGQPGYNGQAGRKGQKGDTLE LSVFMERFRGDSGQPGYPGFVGPQGYPGRSGYRGLPGRQGPLGFPGLPGPKGTMTKVLKG VKGEAGEAGQQGPPGNSTHPHTSPITGPYGRKGEKGLKGETGVEADNKGETGIMGMPGQR GVPGRDGEQGLRGDLGEPGFRGRDGQKGAVGEPGELIYYEGPSGGPNRVGPPGQLGPQGE MGLQGEKGLPGRAGPPARKSDSQLQVEYLWGPFGEPGVKGETGPPGEPGIPALSPGPPGI EGISGLRGPPGPPGSWADFYKGFAGSRGRPGSAGRKGLKGDHGLCECNIVHSPPGLPGPA GSQGDPGMSGEFGQQGEPGEPGPQGVIGLPGFPGATGQPGPKGRKGEFTWAKEKGHAGDP GDPGATGDPGLQGFPGPSGNNGFPGNRGLSGDAPEGLTGEKGYPGRSGLPGLFGQMGEPG RVLGATKGVRGLQGDDGEPGYAGVEGRAGDPGVSDCSPRGDGGLNDKGDCDAVPGPPGMP GPPGPEGLVGFPGIPGQNGFTGPLGDEGAKGEIGEQGIGGSPGQPGFTGPRGDLGQPGVK GKPGDQGLPGQQGRDGESGEKGPHGEIWGASTGQPGEVGLPGEQGPKGFVGEPGNEGYPG MGGMPGMIGFKGNVGSSGLQGEQGRPGAAGKYGWKGVPGQAGVHGPTGSIGQPGLSGGRG DQGDPGAPGPIGLKGTLGEFGGLGAEGNTGHLGDPGEPGPIGHSGLPGFKGIKGSRGMSG FGGMPGETGLEGFSGQKGEDGIPGGFGQKGIMGDYGSKGERGLSGLPGEKPHIPRQIIND MKGTKGEDGTPGQIGFTGPRGPKGFPGVPGMEGYHGVPGDPSDKKGFPGNPGAQGLPGPK GMPGPTGSNGISGFPGMSGHRGEKGTPGAYGSTGDPGVKGVKGEGGPIIDMPGSTGLRGE DGFPGVPGQKGFIGNPGDRGGGGFHGIDGMKGGPGEPGTGGPIGSDGQGGFQGNQGTKGW PGIPGESGTNGRPGFPGQRGFPGLNGILGLDGLKGEKGIPGLPGQDNLGTPGVPGAKGTR GEIGIPNSEVGTPGSLGLKGIQGQPGDQGQVGPPGFQGPQGPQGTSDKPGPSGDPGFPGP KGLPGFPGPRGYPGEPSPYGEKGLAGHYGFPGFSGLKGKQGDQGPTGYKGQSGVSGKKGV KGEQGMMGIPGRFGFQGDRGPSGPKGNTGPIGYLGAPGNQGPAPVTPRVPGERGAPGPQG IRGPEGVRGETGPKGPPGAPGYLGPQGQKGMPGVGGRPGTPGYRGNDGGRGHLGLQGMEG HHGNPGTTGLPGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYFEGQEKAHN QDLGLAGSCLPRFNTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVEEGEIKPYIS RCSVCEAPSVAVAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGDEGGGQSLSSPGSCLE DFRTTPFIECNGAKGTCHYFANKHSFWLTSIEQSFQAEPASETLKAGQLLSRISRCQVCM KNL NT seq 5052 nt NT seq  +upstreamnt  +downstreamnt atgaagtttgaagttcggatgagcgggacaatgcagacaagacaccagattgaactgaag agcctgaagtttctgtttctatttctttccgtggccatcctagcatcaggagttgacgca ggtggtaagaagcagagtgggccatgtggaggaagagactgcagcggagggtgtaaatgt ttccctgagaagggcgccaggggccaacctggtcctcttggcccgcagggcccccagggg cctccagggagcctaggggacccaggagtccaaggagtccaaggagagaagggcgaccgg ggcagaggaggcttcatcggccccaagggttctgtggggatgactggtgttcctgggttt tctggatcggacggtattcctggccatccaggacaggcagggactcgtgggaaacctgga gcagacggatgcaacggaacacatggagattcagggttgtcagggaaaccaggcaacgat ggccagcccgggtataatggtcaggcaggcaggaagggacagaagggagacactctggaa ctgagtgtgttcatggagcggttcaggggagattcaggacagccaggataccctggattt gttggtcctcagggttacccaggtcggtcgggctacagaggactcccaggacgacagggc cctttagggtttcctggccttcctggaccaaagggcaccatgaccaaagtgttgaagggg gtcaaaggagaagcgggtgaggctggacagcaaggtcccccagggaactccacccatccc cataccagcccaattaccggaccctacggcagaaagggtgagaaagggttgaaaggtgaa actggagttgaggctgacaacaaaggagagactgggattatggggatgcctgggcaaagg ggtgtccctggtcgggatggagagcaaggactaaggggggaccttggagaaccaggattt aggggcagagatggccaaaagggtgccgtcggagaacctggggagttgatctattatgaa ggtccctcaggagggcctaacagagttggtccccctgggcagctgggaccccagggagag atgggtttacagggggagaaaggtctgccaggccgggctggacctcctgctaggaagagt gatagtcaattacaagtggagtacctgtggggtccgttcggcgaaccgggtgtaaaggga gagacgggcccacctggagagccaggtatccctgctctcagccccggacccccaggtatc gaaggcatttctgggttgagaggcccacccggaccaccaggatcatgggcagacttctac aagggatttgctgggtcgagagggcggccaggctctgcagggagaaaaggactgaaaggt gatcacgggttgtgtgagtgcaacattgtccactctcctccgggcctgcctggccctgct ggtagccaaggcgaccctggaatgagtggcgagtttggtcagcagggcgagccaggcgag ccaggaccccaaggtgtcatcggactgcctggtttccctggtgccacaggacaaccgggt ccaaagggcaggaagggcgagttcacttgggccaaagagaaaggacatgccggggaccca ggagacccgggtgcgactggtgacccaggattgcagggcttccctgggccaagtgggaac aatggattccctgggaaccgtggtctttcaggggacgcacctgagggactcactggagaa aagggttatcctggccggtcggggctccctgggttgtttggacagatgggagaaccggga cgggttctaggtgccactaaaggggtcagagggttacaaggcgatgatggggagccgggt tacgctggtgtcgaaggtcgagctggagatcctggagtgtctgactgtagtccgagagga gatggtggactgaatgacaaaggcgattgtgatgccgtacccggaccacccggtatgcca ggaccaccaggacccgaagggttagtgggtttcccaggcatcccaggtcaaaatggattc acaggtccacttggagatgagggggccaaaggagagataggagagcaaggcataggaggg tctcccggacagccaggtttcactggcccccgtggagacttgggtcagcccggcgtcaag ggtaaacctggagatcaaggtctgccaggccaacagggtcgggacggggagtccggggaa aagggaccacacggggagatctggggagcgtcgaccggacaacctggagaagtgggtctt cctggagagcagggacctaaaggttttgtcggagaacctggaaacgagggctacccaggg atgggtggcatgcctgggatgattgggttcaagggcaacgtgggttcttcaggtctacag ggggagcaaggaagaccaggagctgctgggaagtacggctggaaaggtgtacctggacag gctggagtccatggaccaacaggaagcatcggacaaccaggtttgagcggaggcaggggt gatcagggggaccctggcgccccggggccaataggactgaaggggacactgggagagttt ggaggtctgggtgctgagggaaacaccggacacctgggtgaccctggagagccaggacct ataggacactctggcctgccagggttcaaaggtatcaaaggttctcgtggcatgtcaggg tttggaggtatgcccggtgagacaggcctggagggcttctctggacagaagggagaggat ggcattcccggtggatttggacagaaaggaatcatgggcgactatggttcaaagggtgaa cgtggtctgagtggcctgccaggcgagaagccccacatccctcgtcagatcatcaatgac atgaaggggaccaagggagaagatggaaccccaggacaaatcggatttactggacccaga ggtcctaaaggttttcccggagttccgggtatggagggctaccatggcgttcccggagac ccaagcgataagaagggtttcccaggcaacccaggggcgcagggacttccagggccaaaa ggaatgccaggtccgactggatcaaacggaatcagcggctttcctgggatgtctggtcac aggggggagaaaggtacccccggtgcctacggatctacaggagatccaggagtgaagggt gtcaaaggtgaggggggtcccataatcgacatgcctggatccacaggactgaggggggag gatggtttcccaggggttccaggtcagaagggcttcattgggaatccgggagacaggggc ggtggtggtttccatggtattgacggcatgaaaggggggccgggagagcctggcacagga ggacctataggatctgacggtcaaggagggtttcaaggcaaccagggtacgaagggatgg cctgggatccccggagaatcaggcacaaatggacgaccaggcttcccaggacaaagaggt tttcctggactgaatggtatattgggactggatggactgaagggtgagaagggcatccct ggacttccaggtcaggataacttgggaaccccaggtgttcctggtgctaagggaacgagg ggtgagataggtatacccaactcagaggtcgggaccccaggatcgctgggtttaaagggc attcaaggacaaccaggtgaccagggccaggtgggacctccagggtttcagggcccccaa ggaccacagggcacctcagacaaacctggaccatcaggagaccctggcttccctggaccc aaagggctgccaggtttccctgggccccgtggatatcctggtgagccctctccatacgga gagaagggtttagctggccactatggcttccccggattctctggtctgaaaggaaagcag ggggatcagggaccaacaggctacaaaggacagagcggagtgtctggaaagaaaggtgtg aagggagagcaagggatgatgggaattcctggtaggtttggtttccaaggagaccgaggt ccttccggcccaaaaggaaatactggacccataggttacctgggagccccaggtaaccag ggcccagccccagtcacccccagggtgccaggagaaaggggtgctccagggcctcagggc atccgaggaccagagggggtacgaggggagactggcccgaaaggaccccctggagctcca ggctacctgggcccccaggggcagaaggggatgccaggggtgggtggcagaccgggtacc cccgggtaccgtgggaatgacggagggaggggtcaccttggtcttcagggcatggaagga caccatggtaacccaggcactacagggttgcctggcatgcctggacgcagtgtgagtgtg ggatatctgctggtgaagcacagccaatcagagcagacccccatgtgccccgtgggaatg tccaagctgtgggatggctacagtctactgtacttcgagggccaggagaaggcccacaac caggacctaggtctggcaggctcctgcctccctcgtttcaacaccatgcccttcctgtac tgcaaccccggagacgtctgctactacgccagccgcaatgacaagtcctattggctgtcc accaccgcaccacttcccatgatgcccgtggaagagggcgagatcaaaccctacatcagc cgctgctctgtgtgcgaggctccatccgtcgccgtcgccgtgcacagccaggacatcacc atcccacaatgccctgtgggctggcgcagcctgtggattggctactccttccttatgcac acagcagcaggtgacgagggcggtggtcagtctctatcgtcccctggttcctgtctggag gacttccgcaccactcccttcatcgagtgtaacggggccaagggcacctgccattacttc gccaacaaacacagcttctggctcacctccatcgaacagtccttccaggcagagcctgcc tccgagaccctgaaagcaggccagctcctctcacgcatcagccgctgtcaggtctgcatg aagaacctgtga

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