Salmo trutta (river trout): 115156445
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Entry
115156445 CDS
T08542
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115156445
09122 Translation
03013 Nucleocytoplasmic transport
115156445
03015 mRNA surveillance pathway
115156445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115156445
03041 Spliceosome [BR:
stru03041
]
115156445
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115156445
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115156445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
115156445
NCBI-ProteinID:
XP_029559731
Ensembl:
ENSSTUG00000008404
UniProt:
A0A673XEE8
LinkDB
All DBs
Position
21:complement(35890493..35908357)
Genome browser
AA seq
1929 aa
AA seq
DB search
MADLEDVKLDGRPLQSLRVADLKAALEERGLPKSGQKNTLVKRLKGALMLENLQRTSHHH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAVEDDDTDKEDHTQDNNRSA
CAAPDQDVAPVLVDQHKLFGLSEGNGLAGTASEGEGHMSRDGHVSAPPAPTSAAVASLAV
HVAVGEQRPERVPTSSQVPADSDDDGADEDWDSGARRRNLGEPPRGQLARARSGGSRQHP
QHIPPLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPARQRTSSTSSSGSSSSG
SCSSSPDPQSNTERKPGPLTLLARKMASEGAFSGVGWHGRGDAERQDNAATAILSSGRGS
QEGTVSAITHTTNAAASLPFPRLVPVTNQGVLGGHLPHSEVPVSVLRPTNMEEGDAAWQQ
ENKEKELQAETDREKSLEQERLGAMEQERLERQRIFEQQRAVEQERERALARERKEREKA
LERERKEREKALERERKEREKALEREKALERERKEQALARERAQALEREEEEREKALAKD
REEREKAMQLEKQRAMERERALEQEREKEKALEKEKALEKEKALEKEKALEKEKALEKTC
EREEEKAALEREGEEKVRALEQERIEMEKALEKERTMEKEREERERALEQEKVLQREKEK
ALEQEKALQREKEERERALEQEKALQRERERESALEQEKALQREKEERERALEQEKALQR
EKEERERALEQEKALQREKEERERALEQEKALHREKVERERALEQEKALQREKVERERAL
EQEKALQREKEERERALEQEKALQREKEERERALEQEKALQREKEERERALEQEKALQRE
KVERERALEQEKALQREKVERERALEQEKALQREKEERERALEQEKALQGERERALDQEK
ALQREKEERERALEQENALQGEREKVERERALDQEKALQRHKVERERTLDQEKALQREKV
AREIALEQEKALQGEREKEERERALEQEKALQGEREKEERESALEQEKALHREKEERERA
LEQEKALHREKEERESHLPPWKRSREFGLTPLPTPPLSTGAGKMAATEGGEPKVPSIPQK
ALRDNQPAESGMPLSRSLATSLSPQSSFKKFRFLRDPIVLSQSSASGVIKRPRTFSESPH
PQSLALQSPSKPGEPEQEGTQQGAQPSVGQAAPKKPARQGVLVSGADTSGTTGPERETPV
IATLGKSPEEEKGKKSLVSEEHVQAHREETDKQAVGETAREANAPSGPAGAVLPPSPQPV
EGKVEKGRERSQKKEEKLGRRSSSSNDSSDSDSGSSSSGSSGSSSSQGKTHITPSGRRPE
KPQINTISQDTETVSQPEAPKAPQHKKRVSGEEEEDINIDGARHRKKPFLGIHAGEDNGQ
KDSEGGDVKTDTTREVNEATMAEPKKAPESSEECETPKVFTARRISLSSSKASPGAVSAE
GETESGAGRKRRWGSSTAVTAKKSSMSITTDSLKSLIPDIRLCPGQKMVVDLHPEEDHLS
GVEEGGRERGEQDLKIRRTVTQVVPSVTQENGQKESKRSEHEEEDREDGGEAKGDREEKM
DGSFQRDSMETQCPSPPSHDMEMKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKQPSP
PRGKVSNIVHVSNLVRPFTLGQLKELLGRTGTVLEDGFWIDKIKSHCYVTYSSAEESIAT
RAALHGVKWPQSNPKFLSLDFIQQEELDFHRGLPPPKRAGEGKRGAAAVPGRGAALPERE
QWAEREREMEHRERTRAEREWDRDKVRDFGPGKPGEEAVSRRSCSRERKRKERKMDKKEK
AADEPPVKLLDELFNKTKAAPCIYWLPLTEEQFAQKETARQERMKEREKRRKEQQEEVEK
KREEERKERMKAASAASGERGEGERYRERERDWGRDGESDKHREDCYRSAGGARRSRSRS
DPPPRDRRR
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttaaactggacgggaggccgctacaatctcttcgcgtggcg
gatttgaaagctgctttagaggagcgcggacttcctaaaagcggacagaaaaatactctc
gttaagagactcaaaggggctctcatgctggagaacctgcagagaacctcacaccatcac
ataggactgcagccaaactcccagattggtgaagagatgagccagaacagcttcataaag
cagtatttggcgaaacagcaggagctcttgaggcagcgtctggagagggaggcccgggaa
gcagttgaagatgatgatacagacaaagaggaccacacacaggacaataaccgctctgcc
tgtgctgccccagaccaggatgtcgcacccgtgttggttgaccagcacaagctttttggc
ctctccgagggaaatggactagcaggcacagcaagcgagggagaggggcacatgtccaga
gacggccatgtgtctgctccacctgcccctacctctgctgccgttgcctctctggctgtg
catgtagctgttggcgagcagcgaccggagagggtcccaacctctagtcaagtcccagca
gatagcgatgatgatggcgctgatgaggactgggatagcggtgccaggaggaggaatcta
ggagagccaccaagaggccagctagcaagagcgaggtctggaggatcccgccaacaccca
cagcacattccccccctattgtctccgcagcttcgacagcctacccctcctccctcccct
cccccagagttatcattcccactgcctgatacccctaaacaaagcccccctagtccaggt
gagcccccagctaggcagcgtacttccagtacctccagctctggctcctctagcagtggc
agttgtagtagcagcccagatccacaaagcaacacagagcgcaagcctggcccactgacc
ctgctggcacgcaaaatggcatcagagggggctttctctggagttgggtggcatggacgt
ggggatgcagagaggcaggacaatgctgcaactgcaatactgtcttctggtagaggttct
caagagggcacagtgtctgccatcacccacacaaccaatgctgcagccagtttgcccttc
cccagactggttccagtaacaaaccagggagttcttggaggccatctcccacacagtgaa
gttcctgtgagtgtgcttaggcccactaatatggaagagggagatgctgcatggcagcaa
gaaaacaaggaaaaggagctgcaggcagagacggacagagaaaaatccctagagcaagag
agacttggtgccatggagcaggaaagactggagaggcagagaatatttgagcaacagcgt
gctgtggagcaagagagggaaagagctttggcgcgagagaggaaggagagggagaaagct
ttagagcgagagaggaaggagagggagaaagctttagagcgagagaggaaggagagggag
aaggctttggagcgagagaaagctttggagcgagaaaggaaggagcaggctttggcacga
gagagggcgcaagctcttgaacgagaagaggaggaaagagagaaagctttggcgaaagac
agggaagagcgagaaaaagctatgcaattagaaaagcagagagccatggaacgagagcga
gctttggagcaggagagggagaaggagaaagctttggagaaggagaaagctttggagaag
gagaaagctttggagaaggagaaagctttggagaaggagaaggctttggagaagacttgc
gagagggaggaggagaaggcggctttggagagagagggggaggagaaggtgagggctttg
gagcaagaaagaatcgaaatggagaaagcccttgagaaagaaagaaccatggagaaagaa
agagaggagagggagagagccttagaacaggagaaggtcctacagagagaaaaagagaag
gctttggaacaggagaaggctttgcagagagagaaagaggagagggagagagctttggaa
caggagaaggccttgcagagagagagagagagggagagcgctttggaacaggagaaggcc
ttgcaaagagagaaagaggagagggagagagctttggaacaggagaaggccttgcagaga
gagaaagaggaaagggagagagctttggaacaggagaaggccttgcagagagagaaagag
gagagggagagagctttggaacaggagaaggccttgcacagagagaaagtggagagggag
agagctttggaacaggagaaggccttgcagagagagaaggtggagagggagagagctttg
gaacaggagaaggccttgcagagagagaaggaggagagggagagagctttggaacaggag
aaggccttgcagagagagaaagaggaaagggagagagctttggaacaggagaaggccttg
cagagagagaaagaggagagggagagagctttggaacaggagaaggccttgcagagagag
aaggtggagagggagagagctttggaacaggagaaggccttgcagagagagaaggtggag
agggagagagctttggaacaggagaaggccttgcagagagagaaggaggagagggagaga
gctttggaacaggagaaggccttgcagggagagagggagagagctttggaccaggagaag
gccttgcagagagagaaggaggagagggagagagctttggaacaggagaatgccttgcag
ggagagagagagaaagtggagagggagagagctttggaccaggagaaggccttgcagaga
cataaagtggagagggagagaactttggaccaggagaaggccttgcagagagagaaagta
gcaagggagatagctttggaacaggagaaggccttgcagggagagagagagaaagaggag
agggagagagctttggaacaggagaaggccttgcagggagagagagagaaagaggagagg
gagagcgctttggaacaggagaaggccttgcacagagagaaagaggaaagggagagagct
ttggaacaggagaaggccttgcacagagagaaagaggagagggagagtcatcttcctcca
tggaagcgtagtcgtgagtttggtcttacccccctgcctactcctcccctctccacagga
gcaggtaagatggcggcaacagagggtggggagcccaaagtgccatccataccccaaaaa
gcattaagagacaaccagccagctgaatctggtatgcccctgtcacgatctctagcaacg
tctctgtcaccccagtcgtccttcaagaagttccgtttcttgagagaccccatagttcta
tctcaatcttctgcatccggggtcatcaagaggccccgtacattctctgaaagcccccat
cctcagtccttagctctccagtcccccagcaaacctggggaaccagagcaggaaggtact
cagcagggggcccagccttctgttggacaagcagcaccaaagaagcctgcaagacagggg
gtccttgtttctggagcagacacgtcggggacgacagggccagagagggagaccccagtg
attgccacactgggcaagagtcctgaagaagaaaaggggaagaagagcctggtgtcagag
gaacatgtccaagcacatagagaggagacagacaaacaggcggtgggagaaacggccaga
gaagcaaatgccccctcaggtccagcgggagctgtgctacctccctcaccccaaccagtg
gaaggcaaggtagaaaaaggaagggagagaagtcaaaagaaagaagaaaagctgggaaga
cggtcttcctcgtcgaatgactcttcagattctgactctgggtcgtcgtcttcaggttcg
tctggttcatcatcatcccagggcaaaacacacatcactcccagtggtagaaggcctgag
aaacctcagataaacaccatatcccaggatacggaaacagttagtcaacctgaggcccca
aaagctccacagcacaaaaagcgagtatctggggaggaggaagaggacataaacattgat
ggagccagacacaggaagaaaccattccttggaatacatgctggagaagacaatgggcag
aaggacagcgagggaggggatgtaaagacagacactacaagggaggtgaatgaggctacc
atggctgagcctaagaaggctcctgagagcagtgaggagtgtgagacaccaaaggtattc
acagcccgtaggatctcccttagcagcagcaaggcctctccaggtgctgtcagtgcagag
ggcgagacagagtctggggccgggaggaagaggcgatggggatccagcactgcagtcaca
gccaagaaatcatccatgagcatcacaacagactctctgaagtctctgatcccagacatc
agactgtgtccaggccagaagatggtggtggatctgcacccagaggaggatcacctctct
ggggtggaggaggggggcagggagcggggtgagcaggacctcaagatcagacgcacagtc
acacaggtggtcccgtcagtgacccaggagaatggacagaaggagtccaagaggagtgaa
catgaggaggaagaccgagaggatggaggggaggctaaaggagacagagaggagaagatg
gatggctcattccagagagactccatggagacacaatgcccctctccccctagccatgac
atggagatgaaaacagtgacccccagtgacacattgatccgtcgctccatcagccagcag
aagtctggcgtgtccatcaccatagatgaccctgtccgcacagccaagcagccctctcct
ccacgaggcaaagtgtccaacatcgtccacgtgtccaacctggttcgtccgttcaccctg
ggccagctgaaggagctgcttgggaggaccggcaccgtgctcgaggatggtttctggatc
gacaagatcaaatctcactgctacgtcacatactccagtgcagaggagtcaattgccact
cgtgcagcactgcatggggtgaaatggcctcagagcaaccccaagttcctcagtttggac
ttcattcagcaagaggagctggatttccacagaggcctgcctccccctaagagggctggg
gagggtaagcggggggctgcggcggtgcctggtcggggagcggccctgcccgaacgggag
cagtgggcggagcgagagcgtgagatggagcacagggagaggacccgggctgagagggag
tgggacagggacaaggtccgggactttggtccaggaaaacctggagaggaagcggtctcc
agacgatcctgctccagagagaggaaacgcaaggagaggaagatggacaagaaagagaaa
gctgcagacgaacctcctgtcaaactgctggatgaactgttcaataaaaccaaagcagcc
ccttgtatatactggctccccctcacagaagagcagtttgcacagaaggagacagctcga
caagagaggatgaaggagcgagagaagaggaggaaggagcagcaagaggaggtggagaag
aaaagggaggaagagcgcaaagaaaggatgaaagccgcgagtgccgcatctggagaaaga
ggcgagggggagcggtacagagagcgagagagagactggggcagagatggagagagtgac
aaacacagagaagactgctaccgcagtgcagggggggccagacgctcccgcagccgcagt
gaccccccacctcgtgacagacgacgctag
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integrated database retrieval system
