KEGG   Salmo trutta (river trout): 115156495
Entry
115156495         CDS       T08542                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115156495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115156495
Spliceosome [BR:stru03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115156495
 Complex B
    115156495
SSDB
Motif
Pfam: RRM_1 RRM_7 DUF5588 DUF1543
Other DBs
NCBI-GeneID: 115156495
NCBI-ProteinID: XP_029559778
Ensembl: ENSSTUG00000027982
LinkDB
Position
21:complement(88746..188887)
AA seq 528 aa
MAVAVSAGGEALMMENGQSTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTLAH
QQQQLTNLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTVRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLSLEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGKHKSYG
FIEYDKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQETVGSSVLGALAGPALLSQQLGSLPQAVMAAQAPGVITGVTPVRPALPVLPQVG
LVNPVLALPPVLVTSLVAAQEAKKKEVEEEEEALQDGTGQEPLSEQEHMSISGSSARHMV
MQKLLRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEDDAEV
IVKIFVEFSMAAEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLSA
NT seq 1587 nt   +upstreamnt  +downstreamnt
atggcggtggctgtttctgcgggaggcgaggctctgatgatggagaatggacagagcacc
gcctcaaagctcggcctgccgcctctcacccctgagcagcaggaggcactgcagaaggcg
aagaagtatgccatggagcagagcattaagagtgtgctggtcaaacagaccctggcccat
caacaacagcagctcaccaacttacagatggcatcactgacaatgggctttggagatccc
ctctcacctttacaatcggtagcggctcagagacagcgagcattagccatcatgtgccga
gtgtacgtgggctccatttactacgagctgggagaggacacggtccggcaggcctttgcc
ccgttcggccccatcaagagcatcgacatgtcctgggactctgttacaatgaaacacaag
ggttttgcgtttgtggagtatgaggtgcctgaggcagcccagctatcccttgagcagatg
aactccgttatgctgggagggagaaacattaaggtgggacgaccgagcaacatcggacag
gcccagccgatcattgaccagctggcagaagaggcgcgcgctttcaaccgaatctacgtg
gcatctgtgcaccccgacctctcggacgaggacatcaagagtgtgtttgaggcgttcggc
cgaatcaagtcatgcactctagcgagagaccccaccacggggaaacacaagagctacggc
tttattgagtacgacaaggctcagtcctcccaggatgcagtttcctccatgaatctcttt
gacctagggggtcaatacctgcgtgtaggcaaagcggtcaccccccccatgcccctgctc
actccaaccacacctggcggactcccccctgctgcagctgtggcggctgcagctgccaca
gccaaaatcactgcccaggagacggttgggtcatcggtgctgggagcgctggctgggccc
gccctcctctctcaacagttgggtagcctgccccaagccgtcatggcagcccaggccccg
ggggtcatcacaggggtaaccccagtgcggcccgctttgcctgtgctacctcaggtgggc
ctggtcaacccagtgctggccttaccaccggtgctggtcacctctctggtggcggcccag
gaggccaagaagaaggaagtggaggaggaggaggaggccttgcaggacgggacgggccag
gagccgctgagtgagcaggagcacatgagcatctccgggagcagtgccagacatatggtc
atgcagaagttgctccgcaaacaagagtcgacggtgatggtgctgcggaacatggtagga
ccagaagacatcgacgatgacctggagggtgaggtgactgaagagtgcggcaagtttggc
gcggtcaaccgtgtcatcatctaccaggaaaagcagggcgaggaggatgatgcggaggta
attgtcaagatctttgtggagttctccatggcggcagagatgaacaaggccatccaggca
ctcaataatcgctggtttggaggtcgcaaggtcattgccgaggtgtacgaccaggagcgc
tttgacaacagcgacttatctgcataa

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