KEGG   Salmo trutta (river trout): 115156612
Entry
115156612         CDS       T08542                                 
Name
(RefSeq) probable flap endonuclease 1 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03030  DNA replication
stru03410  Base excision repair
stru03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115156612
   03410 Base excision repair
    115156612
   03450 Non-homologous end-joining
    115156612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stru03032]
    115156612
   03400 DNA repair and recombination proteins [BR:stru03400]
    115156612
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115156612
DNA replication proteins [BR:stru03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    115156612
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     115156612
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     115156612
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115156612
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Csm1_N
Other DBs
NCBI-GeneID: 115156612
NCBI-ProteinID: XP_029559971
Ensembl: ENSSTUG00000045868
LinkDB
Position
21:complement(8719733..8727777)
AA seq 351 aa
MGITKLADLIRSDAPGAISYKEICDYTGKVIALDTSIVLNQFRTAVPNLQLLGPLTGLFF
RTLTFLEHDIKPLFVFDGKPPGEKRAVLEKRAQAAGWSSPSRSGAVSPQTRDCLHLLKLM
GVPIIQAPGDGEALCAHLVKQGIVDAVASEDMDTLPFGGNILIRQLNAKKNSEVIEYSLP
KLLDILKITHEEFVDLCILLGCDYCDKITGLGPKRALTLVQQHRNIENVVLNINRKTHPV
PLFWQYQDARKLFLDAPLTELPNLVWTEPDEEALVHFLCHEKHVKEQRVRGRMQKFSEKR
ERLRKEREEDKAAGQSRQTRMEDFFRVTRKRQQPSETGDSIGTKEKRARPK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggtattacaaaactggcagatttgattcgtagcgatgcgcctggagctatttcttac
aaagagatctgcgactacacaggaaaggtcattgcgttggacacctccattgttctgaac
cagttccgcactgcagtaccaaatcttcagttactgggtcccttgacaggtttgttcttt
cgaacgctaaccttcctggagcatgacatcaaaccattgtttgtgttcgatgggaagcct
cctggggagaaaagggctgtgttggagaagagggcacaggctgcaggctggagctccccc
agtcgttcaggagcagtgtcccctcagacacgggactgtctccaccttctgaagcttatg
ggtgtgcccatcatccaggctccaggagatggcgaggcactatgtgcccacctggtgaaa
cagggcatagtagacgcggtagcatcagaagacatggacactctgccatttggtggaaac
atcctgatccgccagctcaacgccaagaaaaacagcgaagtcattgagtactctctaccc
aagctgctagacattttgaagataacacatgaagagtttgtggacctgtgtatcttgttg
ggctgtgactactgtgacaaaatcacaggccttggacctaagagagctctgactctggtc
cagcagcaccggaacatagagaacgtggtgctgaacatcaacagaaagacccaccctgtc
ccactgttctggcagtatcaggatgcccgcaagctgtttttggatgcccccctgaccgag
ctcccgaacctagtctggactgagccagatgaggaggccctggtccactttctgtgccac
gagaaacacgtcaaggagcaaagggtacgaggtcgaatgcagaagttcagtgagaagcgt
gaacgcctgaggaaggagagggaggaggacaaggcagcaggacagagccgacaaactcgc
atggaggacttcttccgtgttacacggaaaaggcaacagccgtctgaaactggggattcc
attggcaccaaagaaaagagagcgaggccaaagtga

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