Salmo trutta (river trout): 115156614 Help Entry 115156614         CDS       T08542                                  Name (RefSeq) collagen alpha-3(IV) chain-like   KO K06237   collagen type IV alpha Organism stru  Salmo trutta (river trout) Pathway stru04382   Cornified envelope formation stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115156614  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115156614   09142 Cell motility    04820 Cytoskeleton in muscle cells     115156614  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115156614  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115156614    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115156614 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115156614 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115156614 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115156614 NCBI-ProteinID:  XP_029559973 Ensembl:  ENSSTUG00000045909 LinkDB All DBs Position 21:8806340..8882565 Genome browser AA seq 1655 aa AA seqDB search MRTALLCFVFLGMMLLGIEAKDCACTGKSRCHCEGVKGNKGEKGYSGETGPPGSVGYPGS EGHPGTVGPKGDVGPHGPPGQYGNRGPEGKEGFAGTPGLPGIPGLQGPMGQQGAPGCNGT EGNRGSTGPPGLHSSDGLRGSPGAPGPKGESQTIGSGQPGPRGRDGDQGVPGSPGPTGPS GEAGPRGVEGLIGLPGAPGLKGQEGRSSSIPGPRGLKGHQGPPGIPGPKGIKLYAHAPFD MKGEIGELGEKGCKGSPGYAGHIHFKGAKGDQGDLGSEGRPGKDGERGLAGYKGRKGNHG SAGPDGIPGPWGQKGGQGQDGDPGEVTVIGEAVFGSGGAKGQQGLAGPPGPTGVTGPPGN TGFQGPPGPPAPNYGDDPYNRGAKGRSGPKGDKGDQGPIIHGEPGREGFPGTTGESGDPG PPGPSGDSGNLKGFIGPPGEKGAKGLTGEQGYSGQYGLKGQKGEVCRLCTGKGSGEPGPP GPPGQPGFPGFNAGPGPKGEPGFKGPSGPPGRPGPHGPSGVPGPPGLKGNPGSHNHHGIK GEKGSPGLAGRSGQDGNQGNPGFPGRKGQQGPKGDPYYGPPGLKGDVGVPGHPGPQGYQG PDGSPGPVGIGTLGHPGSKGNSGVPGLPGIAGYPGQKGEPSKRVAYQGVPGPPGQMGLPG LQGPPGPRGSAGLQGVDGYQGEKGDSGGFSTLGGRGPTGPKGDKGHPGPPGTSGSGSPGR PGTLGIPGEPGSKGDVGFGAPAPVGPKGFQGGVGARGPPGDPGLLGRPGNPGPIGLNGSP GPKGSKGGVGSQGPPGYAHTDCTGATTGTPGSPGRPGPPGLNGQTGALGAPGAPGFGRSG PAGDPGPPGVSGPGVQGLDGQKGGRGRDGLTGPPGPRGDPGLDGRSGSGPDGFPGSGGHP GPRGSDGRDGDKGHRGVPGPVGDNGTPGPSGPAPITDLYGLPGDPGKLGLLGFSGARGDP GYPGPKGIDGRDGDPGKHGPRGPPGDRGADDLYSVGGPGPSGPRGDIGSMGLPGPHGIKG VLGYHGDLGQDGRPGPYGPKGTKGEPSYAQPGRLGPPGQKGEPALSNSHGSKGERGSPGC AGRPGTQGPTGANGDPGHHGHHGPLGPAGPPGTDGPPGHPGPTPSYGAPGQPGLPGPPGP CGPKGNQGSDGIPGPAGQKGEILIVGLTPGLRGENGQPGPKGDVGFPGPTILGPPGFTGD QGIEGPQGPRGEPGLGAVCLKGLKGNTGPHGRPGSPGQQGPRGQPGSGGYGYKGDRGDTG SPGGRGFDGPRGDPGLPGPWGPRAIPGPPGPIGDPGHPGPPGFPGETGDPSYNPGTKGPN GAKGWPGPPGRPGLDVSGQVRFHQGDPGPLGHPGNQGFPGPSGPPGRPGFAGPTGAKGQH GHSPPGLPGFPGRKGDKGSPGRTGPVGYQGSPGQKGSRGPWGSSTAGLADSFLLARHSQT IRVPDCPRGTTLIYSGYSLLFINGNERAHGQDLGSMGSCLPRFSTMPFLFCDTDNTCRYA ARNDYSYWLSTEKSMPLSMDLIRGDEIGSYISRCSVCEGSSNAIAIHSQTTQTPDCPRDW ESLWTGYSFVMQTGAGAEGSGQPLVSPGSCLEHFRQVPFIECHGRGTCNYFPDSYSYWLA SLDPNRMFSKPVPQTVKGRLLENVISRCRVCRKPY NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgaggacagcattgctttgtttcgtgttcctggggatgatgctgctgggaattgaggcg aaggattgtgcatgtactgggaagtcgaggtgtcactgtgaaggagtcaaaggcaataag ggagaaaagggttactcaggagagactggtccacctgggtcggttggctatccgggctca gagggtcaccctggaacagtgggaccaaagggggacgtgggccctcatggacctccagga caatatggcaatcggggacctgagggtaaagaaggatttgctgggacaccaggtctaccg ggcatcccaggccttcaaggaccaatgggccaacaaggtgccccaggatgcaatggaaca gaggggaacaggggttcaactggtccacctggactccacagcagtgacggattaagaggt tcacctggagcgcctggaccaaagggtgaatctcaaacaattggaagtggccaacctgga cctagaggaagagacggtgaccagggtgtccctgggtcaccaggaccaacgggaccatca ggggaagcaggacctcgtggggttgagggattgataggcctacctggagcaccaggatta aagggtcaagagggacgcagctctagtatccctggccctcgtggtctaaagggacaccaa gggccccctggaatcccgggaccgaaagggatcaaactatacgcccacgctcccttcgat atgaagggagagataggtgaactgggtgagaagggctgtaagggttcacctggttatgct ggccacatccattttaaaggagcaaaaggggaccaaggggaccttggtagtgagggaagg ccagggaaggatggggaacgaggactcgctggatataaggggagaaaggggaatcacggt tcagcaggtcctgatggaatccctggaccatggggacagaaaggcggtcagggtcaagat ggtgaccccggggaggtgaccgtgattggcgaggctgtgtttggctccgggggtgccaaa ggacaacaagggttggctggccctccgggtcccactggagttactggtcccccaggtaac accggtttccaggggcctcctggacctccagctcctaactatggagatgatccctacaat cgcggagcgaagggccgcagtggacctaaaggagataaaggagaccaaggacccatcatc cacggcgagccaggcagagagggctttccaggaacaactggggaaagtggagaccctgga cccccaggaccatctggagactcaggaaatcttaagggctttataggacctccaggggaa aagggagccaagggcttgacaggcgaacaagggtacagtggccaatatggtttaaaaggt cagaaaggagaggtctgtaggttgtgtacaggaaaagggtctggagagccgggaccccca ggaccccccggtcagcctggattcccaggctttaatgcaggaccagggcccaaaggagag ccaggattcaaaggcccatcaggaccacctggacgaccgggtccccacggcccctcaggt gttccagggcccccggggctgaagggaaatccaggttcccacaaccaccacgggataaag ggagagaaaggatccccaggactagctggcagatcagggcaggacggcaatcaagggaac cctggcttccctggacgcaagggccaacaaggccccaagggtgatccgtactatgggccg ccgggtctgaagggagatgttggtgtcccaggccatcccggaccacagggataccaagga ccagatgggtcgccaggtccagtaggcataggaactctaggccacccaggatccaaaggc aatagcggggtaccaggtctacctggcatagctggctacccaggtcagaaaggtgagccc agcaaaagagtggcttaccagggagtcccaggcccaccaggacagatggggctgcctggg ttacagggccccccaggtcctcgtggtagtgctggtttacaaggagtagatggttaccag ggggagaaaggagacagtggtggattctccaccctgggaggacgaggacccactggaccg aaaggtgacaaagggcacccgggacccccaggtacctctggtagcggctctcctggacga cccggcacattgggaatccctggggaaccagggtcaaagggtgatgttgggtttggggcc ccagctccagtcggccctaaaggtttccaaggtggtgttggggcccggggacctccagga gacccagggctactgggacgaccagggaatccaggaccaataggcctcaatgggtcacca ggccccaaaggaagtaaaggtggagtaggttcccaaggaccacctggttacgcacatact gactgtacaggagccacaaccggaacacctggttcaccaggcagacccggacctccaggt ttaaatggacagacgggtgcgcttggggcccctggcgctccaggttttggacgttcaggc ccggctggtgaccctgggccccctggggtctccggacccggggtgcagggactagatgga cagaagggaggcagagggagagatgggttaacaggcccaccaggtcctcgaggtgatcct gggctggatggaagatctggatcgggccctgacggattccctggatctggaggacatccc ggccccagagggtcggatggccgtgatggggataaaggccatagaggtgtaccaggccct gtgggggacaatggaaccccaggcccctctggaccagcacctatcacagacttatatggg ctcccaggggaccctggaaagcttggtctgcttggtttttctggtgcaagaggagaccct ggatatcctggaccaaaaggcattgatgggagggatggtgacccaggaaaacatgggcct agaggtcccccaggtgatcgtggagccgatgacctatattcagtaggaggaccaggccca tctggacccaggggagatattgggagcatgggtttaccaggtccccatggaataaaggga gttctgggttaccatggagacctgggacaagatggtagacccggtccatacgggcctaaa ggaactaaaggagagcccagttatgctcaaccaggccgcctaggaccacctggacaaaag ggcgagccagccttgtctaacagccatggttccaagggagagagaggctctcctggttgc gcaggtcgtccaggcacccaagggcccactggagccaatggagacccaggacatcatgga catcatggacccctaggtcctgcagggccacctggtaccgatggtcctccaggccaccca ggacccactccgtcatatggagctccaggacaaccagggttacctggccctcctggtccc tgtggtcctaaaggtaaccaggggagcgatggcattcctggacctgctggtcagaaggga gagatattgattgtggggttgactcctggcctacgtggagagaatggacagccaggtcca aagggagatgtgggttttcctggccccaccattttggggcccccagggtttactggagac caaggcattgaaggaccccaaggtcctcgtggtgagccggggcttggagccgtttgtctc aaagggctgaaaggaaacactggtcctcatggcagacctggaagccctgggcaacagggt ccacggggacagccagggtctggaggttatggatataaaggggacaggggagacacaggc tctccagggggcagaggcttcgacgggcccagaggggacccagggcttccagggccatgg ggaccaagagccatccctggacctccaggaccaataggtgacccaggtcaccctggaccc ccaggattccccggtgagacgggtgatcctagttataaccccggcacgaaaggaccaaat ggggccaaaggctggccaggaccaccaggtcgtccagggcttgacgtgtctggacaagtg agattccatcaaggggatccaggcccacttggtcaccccgggaaccaaggatttccaggt ccaagtgggccgccaggacggccaggatttgcaggccccacaggcgctaagggtcagcat ggacacagccctccaggcctgcctgggttccctggacgcaagggagacaagggatcacca ggacggacagggccggtgggctaccaggggtctccgggtcagaagggttctcgtggcccg tggggctccagcacggcaggcctggctgacagtttcctgctggcccgacacagccagacg atcagagtgcctgactgccccagaggtaccaccctcatctactctggatactctctgctc ttcatcaatggcaatgagagagcccacggacaagacctaggctccatgggcagctgccta ccacgtttctccaccatgcccttcctgttctgtgacacggacaacacctgtcgctacgcc gcccgcaacgactactcctattggctgtcgacggagaagtccatgccgctcagcatggac ctaatcagaggagatgagatagggagctacatcagcaggtgttcagtgtgtgagggcagc tccaatgccatcgccatccacagccagaccacccagaccccagactgtcctcgtgactgg gaatccctctggactggatactcctttgtcatgcaaacgggtgcgggtgctgaggggtcg gggcagcctctagtctccccaggctcgtgcctggaacacttccgccaggtccccttcatc gagtgccacggccggggaacctgcaactacttcccagactcctacagctactggctggcc tcactcgacccgaatcgcatgttcagtaagcctgtgccccagactgtgaagggacgtctt ctagagaatgtcatcagtcgctgccgcgtctgcaggaaaccctattga

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