Salmo trutta (river trout): 115156699
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Entry
115156699 CDS
T08542
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115156699
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115156699
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Meiosis-specific proteins
Others
115156699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
115156699
NCBI-ProteinID:
XP_029560143
LinkDB
All DBs
Position
21:12326079..12352731
Genome browser
AA seq
1549 aa
AA seq
DB search
MLDSEDCTLSLDNLFFERPVVHKVKPLCQEQSSWQLEPPLSLSQIPATQDIQKEAEGLSS
FSFSQKPNKFLPPLKRAVDGDGFTPKNNKLNQNTSDGRKEPEAQGGCALWAQEDFMNKSQ
DTTKVRRGQTKTPQESGHALEQKHFPQEFSQSPPLQRSLFKPPSGQVLNSSANSNRGLNQ
ARPGVQQTFDQVSMATEPWLAKQSAAGPGPLTGLGPPTARGPPQKTQDKGTKRAHVLPMT
PQPLHIQSTFGPGILRPISEIPAKFRSVFKEFPYFNYVQSKALDDVLYTSKNFVACAPTG
SGKTVLFELAIIRLLMETTEPWRNVKAVYMAPIKALCSQRFEDWKKKFGPLGLSCKELTG
DTEIDDFFEIQDANIIMTTPEKWDSMTRKWRDNCLLQLVQLFLIDEVHVVKDPMRGATLE
VVVSRMKAVHAYRAVENPQEDLSMRFVAVSATIPNTKDIADWLCDDRDPATCLEMDESHR
PVKLRKVVLGFPCSSNQTEFKFDLSLNYKMANIIQTYSDQKPTLVFCSTRKGVQQSATVL
AKDARFIMSIEHKQRLVNYANSLLDSKLRDLVLFGVGFHHAGVDVSDRKRIEEAFNMGDL
PVLFTTSTLAMGVNLPAHLVVIKSTMHYIGGACEEYSEADMLQMIGRAGRPQFDTSATAV
IMTKTQTKDKYMQFTNGAEIIESSLHTHLVEHLNAEIVLHTISDVNMALDWIRSSFLYIR
ALKNPKHYGFSTDLDRCGIEAKLQELCLKNLNSLASIGLISMDEDVNIKATEAGRLMARY
CVAFDTMKQFSKVTGTETLPELIELMAKGREFTDVQLRVNEKRTLNTLNKDKNRITIRYP
MEGKIKNKEMKVNCLIQAQFGSIPIQEFGLAQDTGRIFRNGVRISRCLAEFLNQRSKTGF
SALLNSLILAKCFRAKLWEDSPYVSKQLEKIGLSLSTAMVNAGLTTFNKILQTNARELEL
IVNRHPPFGNQIRDAVINLPKYEVSLEQLPRYNIATAEIVVTVNVKNHEQLLSKRTTHDH
HYVTMIIGDCDNNVVFLQKLTDLMLLKSGNWSKKIEVAKAFKGEEISVNLISSEYVGLDI
QQKFSAFYSGPKRYGGEALTPEQRDTMQIAQANAQRSQGATQRIQPTGQQTQATAQKRNS
TSTEKVPGKRQCNHFCKNKDQCGHDCCQNGVPVVLKRPMNQHSSFSSYLQDLKTRSDTLT
ETPVKRLKMRMSGRTGTTNIQQFSYTPAACSYVGNHYGASAIQQSVESAEDFATPQEMAY
LENYDHEYNDYLEDIYQTMGEEEPPPIQTPTESQRTSMWRKPSAYNRGSLSHSIPQTDSM
GYHQSNFPLQNQSRGYPQSHNTPQSQTSGYSTPQSQSRSYSPSPIIDLTDDSGFLLSSHT
PSVTFDLGDEWDDFDDDNLVHASETSCTTVAKTQGMDRDRLKGHSTPLPSTYVQPKPRFT
VSSAPLRSTSPVVPQIAVTSLSVRPHNLQASAPWSDSDNKATRTFSEPSVKAPSIPKQTD
TSMAPLGGQFDFFSKTTTPNNDNVTGKRLQGEDNSKEVEAFMGIFDGLF
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgttggactcagaagactgcactttgtccctggataacctgttctttgagaggccagtt
gtccacaaagtaaagccactttgtcaagagcagagttcttggcagttggaacctcctctg
tccctctcccagatcccagccactcaggacatccagaaagaggcagagggtctttcatca
ttcagtttctctcagaagcccaacaaattccttccccctttgaaaagagcagttgacggt
gatggtttcactcccaagaataacaaattaaatcagaataccagtgatggaagaaaagaa
cctgaggcacagggcgggtgtgccctttgggctcaggaagacttcatgaataaatcccag
gataccacaaaggttagaagaggtcaaactaaaaccccacaggagtctggtcatgcactg
gagcagaaacatttccctcaggagttcagccaaagcccacctctacagagaagtttgttc
aaacctcccagtggtcaggtgttgaacagcagcgcaaactcaaacagaggcctcaaccag
gcaagacccggagtgcagcaaaccttcgaccaggtttctatggcgacagagccttggctg
gcaaagcagtcggcagcaggccccggacccctcaccggtctgggcccgcctacagcccgg
ggaccaccacagaagacacaggacaagggcaccaagagggctcatgttctccccatgaca
ccccaaccccttcacatacaaagtacttttgggcctgggatactccgaccaatctccgaa
atccctgctaaatttagatcggtcttcaaagagttcccttacttcaactacgttcaatca
aaagccctagatgacgttctatacacgagtaagaactttgtggcttgtgctcctacgggc
tctggtaagactgtgctttttgagttggccatcatccgcctactgatggagaccacagag
ccctggagaaacgtcaaagctgtgtacatggcccccatcaaagctctatgcagccagcgc
tttgaggactggaagaagaaattcgggcctctgggcctgagctgcaaggagctgaccgga
gacacagagatcgacgacttctttgagattcaagacgccaatatcatcatgaccacacct
gaaaaatgggacagcatgacgaggaagtggagggataactgcctgctgcagttggtccag
cttttccttattgacgaggtgcacgtggtgaaggacccaatgcgtggagccacactagag
gtggtggtgagcaggatgaaggcggtccatgcctaccgtgcagtagagaaccctcaggag
gacctctccatgagatttgtggctgtctccgccaccatccccaataccaaggatatagca
gactggctgtgtgacgacagagaccctgctacttgtctggagatggatgagagtcacaga
ccggtgaaactgaggaaagtagtgctgggtttcccctgcagcagcaaccagactgagttc
aagttcgacctgtcactcaactacaagatggccaacatcatccagacctactcggaccag
aaaccaacacttgttttttgttcaacaaggaaaggagtccagcagtcggccactgttctg
gccaaggatgccaggttcatcatgagtattgagcacaaacaaaggttggtgaattatgca
aactctctcctggactcaaaactcagagacttggtgttgtttggggttggtttccaccac
gctggagttgacgtgtcagacaggaagcggatcgaggaggccttcaacatgggagacctg
cctgtgctgtttacaactagcactctggcgatgggggtgaacctgccagcccacctggtg
gtaatcaagtccaccatgcactacatcgggggcgcctgtgaggagtacagcgaagccgac
atgctgcagatgattggccgagcaggccggccacagtttgatacatcagcgaccgcagtg
atcatgaccaagactcaaaccaaagacaagtacatgcagttcacgaatggagcggaaatc
atcgaaagcagcctgcatacccacctggtggagcacctgaacgctgagattgtcctccac
accatctcagacgtcaacatggccctggactggatccgctccagcttcctctacatccga
gctctgaagaaccccaaacactatggcttttccactgacttggaccgatgtggaatcgaa
gccaaattgcaagagctctgtctgaagaacttgaattccctggcctccattggtctgata
tccatggatgaggatgttaacatcaaagctacagaggcaggcaggctgatggcaaggtac
tgtgttgcgtttgacaccatgaagcagttcagcaaggtgactggcactgagaccttacct
gagctgatagaattgatggcgaagggcagagagttcactgacgtgcagctgagagtgaac
gagaagagaaccttgaacacgttgaacaaggacaagaacaggatcactatcaggtatccc
atggagggaaagatcaaaaacaaagagatgaaggtgaactgtttgattcaagcccaattt
ggctccattccaatccaagagtttggacttgcacaggacacagggagaatcttcagaaat
ggagtccgaatcagcagatgcttggcagagttcctaaaccagcgctccaagacaggcttc
tctgctctactcaactccctgatactggccaagtgcttcagggccaagctgtgggaggac
tctccttacgtctcaaagcagctggagaaaatagggttgtctctgtcgacggccatggtg
aacgctgggctcaccaccttcaacaagatactgcagaccaacgccagggaactggagctg
attgtcaacagacatcctccgtttggaaaccaaatcagagacgctgtcatcaatctaccc
aagtacgaagttagtttggagcagcttccaagatacaacatcgccaccgcagagattgtc
gtgaccgtgaatgtgaaaaaccacgaacagctactgtcaaagagaaccactcatgaccac
cactatgtcacaatgatcatcggggactgtgacaacaacgtggtcttcctgcaaaaactc
acagacttgatgctgttgaagtcgggaaactggtcaaagaagattgaagtggcaaaagcc
ttcaaaggagaggagatcagcgtgaatctaatcagctcagaatacgtggggttggacatt
cagcagaagtttagtgccttctactctggaccaaagaggtacggaggtgaagcactcaca
cctgagcaacgtgacacgatgcaaatagcacaggctaacgctcagagatcacagggtgca
acacagagaatacagccaacaggccagcaaacacaggctacggcacagaagagaaactcc
acatccacagaaaaggttccaggcaaaaggcaatgtaaccacttctgcaaaaacaaggat
cagtgtggccacgactgctgtcaaaatggagtgccggtggttctgaagaggcctatgaat
cagcattcgagtttctcttcctacctccaagacttgaagaccaggagtgacacactgacg
gagactccagtcaaacgcctcaaaatgagaatgagtggtaggactgggactacgaacatt
cagcaattttcttatacgcctgctgcttgcagttatgtaggtaatcattatggtgcttca
gcaatacaacagagtgtggaatcagctgaggactttgcaacgccccaagagatggcatat
cttgagaactatgaccatgagtataatgactacctggaagacatatatcagacaatggga
gaagaggaaccaccacctattcaaacccctacagagtcacaaaggacttcaatgtggagg
aaacccagtgcctacaacagagggtcactcagtcacagcatcccccaaaccgatagcatg
ggttaccaccaaagtaatttcccccttcaaaaccagagtaggggttaccctcagagtcac
aataccccccaaagccagactagcggttacagcactccccaaagccagagcaggagttac
tctccgagtcccatcatagacttgaccgatgacagtggcttcctcttgtcgtcacacacc
cccagcgtgacctttgacctgggagacgaatgggatgattttgacgacgacaacttagtt
cacgccagtgagacatcatgcaccactgtagctaaaactcaggggatggaccgtgacagg
ctgaaaggtcactcaacaccactaccatccacttatgtacaacccaaaccccgcttcact
gtgtccagtgccccactcaggtcaacctccccagttgttcctcagatagcagttactagt
ctctcagtcagaccacataacctccaggcttctgctccctggagcgactctgacaacaag
gccacaaggacattcagtgaaccctctgtgaaagcaccctccatcccaaaacagactgat
acaagcatggctccgctgggaggacagtttgatttcttctcaaagacgactaccccaaac
aatgacaatgtgactggcaaaaggctccagggagaggacaacagcaaggaagtggaggca
ttcatgggtatatttgatggactattttag
DBGET
integrated database retrieval system
