Salmo trutta (river trout): 115156700
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Entry
115156700 CDS
T08542
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115156700 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115156700 (rpap2)
Enzymes [BR:
stru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115156700 (rpap2)
Protein phosphatases and associated proteins [BR:
stru01009
]
HAD phosphatases
Fcp/Scp phosphatases
115156700 (rpap2)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115156700 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
DUF6922
Motif
Other DBs
NCBI-GeneID:
115156700
NCBI-ProteinID:
XP_029560150
Ensembl:
ENSSTUG00000038481
LinkDB
All DBs
Position
21:12383195..12393917
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AA seq
676 aa
AA seq
DB search
MENEPRKRVARSSKPGKRDGKSVKEAQTAVEEARRREAVRETLREKLDLEKRALQVVERL
LEDSVADDFLVDCARLITAANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTKTNK
VYDITERKSFCSNFCYKASKSFQLQISKSPLWLRQHESPPDVKLMKKGDGFPPPLFSGST
GEEVRLAERRLREDDVENPLPLDSVSPEDPRRSPTAGNSDDSDAEHDFVSSVVSQRRGPT
VHWGDLPKRTAEGEGREPGEGEDRERRSGGKDTTVPKQIQTNEAEDEEEEENTEESQKAQ
RKPSNGTDGQQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRATATSPA
LTACSVQNQDPATKPSPQGDPAQPTQPGINITQVGMSRRGAQGLLKGHEAGTKPVSVRLN
LLEGLRRTFTEWTTEETMKFLYGPDHFSKTLIETKEEEEKEEELDEDDLEDIVEGGGEGG
ETDSQRGPGRPSAPAPDYDTLRRETEEMGLRVREFYKGTEEVQRVSGKQHARGGDSENQG
GALPLVDSHAQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTNII
HKGPEWTLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDRDLQSLVQLLRT
AELCPHAHKEKRQTNQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatggg
aagagtgtcaaagaagcacagaccgctgtagaggaagcaagaaggagagaggcagtgagg
gaaaccctgagagagaagctggatctggagaagagggctctgcaggtggtggagcgtctc
ttggaggacagcgtagcagacgacttcctggttgactgtgcaaggttgatcactgctgcc
aattacaaagacacagttgaggagaggtccattgtgaagctgtgcggttatcctgtctgt
tcaaacaaactgggcaaggtctccactcaacagttcaaaatctccaccaaaaccaataaa
gtctatgacatcacagaacgcaagagtttctgcagtaacttctgctacaaagcctccaag
tcctttcagctgcagatatcaaagagccctctgtggctgaggcagcacgagagcccccca
gatgtgaaattaatgaagaaaggagatggattccctccccctctgtttagcggtagcaca
ggagaggaggtgaggctggctgagaggcgtctcagagaggacgatgtggagaaccccctt
cccttggactccgtgtccccagaggaccccaggcgctcccctacagccggcaacagcgac
gacagcgacgcagaacacgactttgtctcaagcgtggtctcccagcgacggggacccacg
gtgcactggggcgatctgcccaagcgcaccgccgaaggggagggtagggaacctggagag
ggggaggacagggagagaaggtcgggaggtaaggacacaacggtgcccaagcaaatacaa
acaaacgaggcggaagatgaggaggaggaggagaatacagaagaatcacagaaagcacaa
aggaagccaagcaatggcacagatggacaacaacagcacaccacagatacgaaccaccag
agtgagcagcaatctttcctgggagagagagggtcgccagagggccagtctatggaggaa
gccgcagagctattgagccaagttacaatacaggatcgagccacagctacgtctcctgca
ctaacagcctgcagtgtacagaatcaagacccagctacaaaacccagtccacagggggac
ccagcacagcccacccagcctggcatcaacatcacccaggtgggcatgagcagaagggga
gcccaggggctcctcaagggccacgaagccgggactaaacctgtctcggtccggctgaat
cttctagaaggcctaaggaggaccttcactgaatggacgactgaggagactatgaagttc
ctatatggcccagaccactttagtaaaacactgatagaaacaaaggaggaggaggagaag
gaggaggagctagatgaagatgacttggaggacattgtggagggtggtggggagggaggt
gagactgactcccaaaggggtccaggaaggccctcggccccggccccggactacgacacc
ctacgcagggagacagaggagatggggctgagggtgagggagttctacaaagggacggag
gaagtccagcgggtgtcagggaaacaacatgccagaggcggagactcagagaaccagggt
ggggcgctcccgttggttgactcccatgcccagcacctcatccagaaacggattacggtg
gagaagctcactaaaggcctgagagacatcgtgggccctctgcgtctcaccatgactgac
gtctccagtgacctcaacaggctggtcagaacattcagatttacaaacaccaacatcatc
cacaaaggcccagagtggaccctgattgcggtggtgctcctccatttgttatcagaggtg
tccccggtggtgcgggaggccctggagaggccggcctcagtcgattacctctctactctg
atgcaggagctcccactgctggaccgggacctgcagagcctggtccagctactcagaacc
gcagagctctgtccacacgcgcacaaagagaaacggcagacaaatcaatga
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