Salmo trutta (river trout): 115156774 Help Entry 115156774         CDS       T08542                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:stru03000]     115156774    04121 Ubiquitin system [BR:stru04121]     115156774 Transcription factors [BR:stru03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     115156774 Ubiquitin system [BR:stru04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     115156774 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 zf-RING_6 RING_XB3-XBAT31 Motif Other DBs NCBI-GeneID:  115156774 NCBI-ProteinID:  XP_029560308 Ensembl:  ENSSTUG00000025995 LinkDB All DBs Position 21:15105033..15143107 Genome browser AA seq 1128 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDAQHYEEASQCVEELALYLKPLSNTRGVG LSSTTLSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLVARLPGSSGLLQDDGLSLDVGVTRKPS PLTNGSAVPPMPQLIARGIELVTYDLLRKPKMDGGSNSSPESPPDSLDLGPKQGYPQPPH AMGYSRGPGDHMSMPKQMPSGVVPRGPQMYPQQQQPEMYYSDSRPPPSASQYEPSQYPQG YPYQQPPQYAPQRYIRNPPPPSEPAGPPYQDPYPDYGPPDRPYPAPHSGPPFSYPPPSHY DTRGRHGPYSSPPPPPQPYPSQRDDMVRMSPAPLEGPPYHQEQAARERYPPEGFYPPGAQ PQPLRSYVRVSLVPPQWSGTLVPESYKEPYGRSSQPSLDYLHHRRKELMAQLEERKVIAP SPTLPHTFPSDYPPEYGEESSKAFGKCREPDYAGQYSPWSCDTIGSYIGTKDSKPKDVMA PGAMEMMNVDGKGRRGEPSMEAQVRRGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQ TTGPMQVLGPAQGPNPKHMAIAAEYSYGNHGGWGGASYPSHQTVSSSQGHFSERLPMPTQ DREQLKTELQQVNQQINQQSQIHGMELSQPGQNQGQQGGKWPGPAGGSGSAAPVSSEQLS MELHQVEREIGKRTREMDMSLQDSQVAHEVLYKTKTAENGQQDHKAQLEEIALALGEVSN GSSGLGQDGGVGGAMLSLTTKASSLSLCSEPGPGGSDLQKNGVVHSCS NT seq 3387 nt NT seq  +upstreamnt  +downstreamnt atgcccgtgcaagccccacaatggacagagttcctgctgtgtcccatttgcactcagacg ttcgaggagacggtgcggcggcccatttcgctgggctgtggccacacagtctgcaagatg tgcctgaacaagctgcaccgcaaggcctgcccctttgaccagacggccatcgccactgac atcgagcagctgcccgtcaacacggccctgctgcagctggtggggggacaggttcccaag gtccagccggtggcccttatcaccagcccagaagacgcgcagcactatgaggaggccagt cagtgtgtggaggaactggccctctacctcaaacccctcagcaacaccagaggtgtgggc ctgagcagcacgaccctgagtatgctgagtcgacccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggagggccgggtgcgggccatgagggcagcaaggtct ctgggggagcgcacggtcacagagctcatcctgcagcaccaaaacccccagcaattgtcg tccaatttgtgggctgctgtccgggctaggggctgccagttcttgggtcctgccatgcag gaggaggctctgaagctggtgctgctggctctggaggacggctcggccctgtccaggaag gtcctggtgctgttcgtggtccagcggctggagccacgcttcccccaggcctccaaaacc agcataggccatgtggtgcaactcctttacagggcctcctgctttaaggtgaccaagcgg gacgaggactcatcgctgatgcagctgaaggaggagttccggacgtacgaggcgctgcgg cgcgaacacgactcccagattgtccagatcgccatggagggcggcctccgcatcgcccct gaccagtggtcctccctgctctatggggaccagtcacacaagtcccacatgcagtccatc atcgacaagttgcagacgccggcttcgtttgcccagagcgtccaggagttgaccatcgcc ctgcagaggacgggcgaccctgccaaccttaaccgcctccgaccacacctggagctcctg gccaacatcgacccgagccccgacgccccccctcccacgtgggagcagctggagaagggt ctggtggcagtgaagacggtagtccacggcctggtggatttcatccagaaccacagcaaa aagggagccgacccacaacagcccccccagcacagtaagtacaagacttacatgtgtcgg gacatgaagcagaagggaggctgtccccgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaaaatgaacaagcgtttggtagctcgcctccccggctca tctggcctgttgcaggacgatggactctctctggacgtgggggtgacccggaaaccctcg cccctcaccaacggctcagccgtaccccccatgccccagctcatcgcccgtggcatcgaa cttgtgacctacgacctgttgcgcaagcccaagatggacggcgggagtaacagctccccg gaatcgccccctgactctctggacttggggcccaaacaagggtacccccagccaccccat gcaatgggctactccaggggcccaggagaccacatgtccatgcccaagcagatgcccagt ggcgtggtgccccgggggcctcagatgtacccacagcagcagcaacctgagatgtactac tccgactctcgccccccgccctccgcctcgcagtacgagccctcgcaatacccccaaggt tacccctaccagcagcccccccagtacgccccccagcgctacatccgcaacccccctcct cccagcgagcccgccggacccccctaccaggacccttaccccgactacggcccacccgat cgcccttacccggccccccactcgggccctcccttttcctaccctcccccatcccactat gacacccggggccgccacggcccttactctagcccccctcctcccccccagccctacccc tcgcagagggacgacatggtccggatgagccccgcgcccctggaagggcccccttaccac caggagcaggctgccagggagaggtaccccccagagggattctacccaccgggggcccag ccccaacccttgaggtcctacgtcagagtgagtttggttcctccacagtggtcaggaacc ctggtcccggagagttacaaggagccgtacgggcgctcctcccagcccagcctagactac ttgcaccaccgccgtaaggagctgatggcccagctggaggagaggaaggtcatcgctccc tcgcccaccctcccccacaccttccccagcgactaccccccagagtatggggaggagagc tccaaagcctttgggaagtgcagggagcccgactacgcaggccagtactctccctggtcc tgtgacaccatcggctcctacatcggcaccaaggactccaagcccaaggatgtcatggcg cccggtgccatggagatgatgaatgtggatggtaaaggtaggcggggggagccctccatg gaggcccaggtcaggcgggggacagaggtgaaggacgacgaccccatcatccctttcggc ccccagcccactgtgtcgcgcttcggggccatctcacgcacctccaagacaggctaccag acgacaggccccatgcaggttttgggccccgcccagggacccaaccccaagcacatggcc atagccgcagagtactcctatgggaaccacggaggctggggcggagcctcctacccctcc caccaaactgtctcctcctctcagggacacttcagtgaaaggctgcctatgccaactcag gacagagagcagctgaagactgagctccaacaggtcaaccagcagatcaaccaacagtct cagatccacggcatggagctctcccagccaggtcagaaccagggccagcagggggggaag tggcctggtccagcggggggttctggcagcgctgccccagtgtccagcgaacagctcagt atggagctccaccaggtggagagggagatcggcaagaggacccgcgagatggacatgtct ctacaggacagccaggtggctcatgaggtcctgtacaagacgaagactgcagagaatggc cagcaggaccacaaggcccagctggaggagattgctctggccctgggtgaggtgtcgaat ggctccagcggtctagggcaggacggcggtgtgggcggagccatgctatcactgaccact aaggcgtcatcgcttagcctgtgttctgagccagggcccgggggctccgatctgcagaag aacggtgtggtccattcctgctcctag

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