Salmo trutta (river trout): 115156805
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Entry
115156805 CDS
T08542
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115156805 (ptbp2b)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115156805 (ptbp2b)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
115156805
NCBI-ProteinID:
XP_029560364
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All DBs
Position
21:complement(16187411..16207503)
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AA seq
542 aa
AA seq
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MDGIATDVAVGVKRGSDELNLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVF
IQFSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPNSDTSALDSVLAQAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPAMAAALNKDSSLLGTPSGM
VAPYSSGGGFQSSLSYSQGGGAISPLSAAAAAAAAAGRVALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRQLFSNAGGTVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgccactgatgttgcagttggcgtgaagagaggctcagatgaattaaat
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtagaggacaggatggagagtcccccatcccgggtgctccacatccggaagctgccc
agtgaggtgtctgagacggaggtcattgccctgggcctaccgttcggcaaggtcaccaat
atcctcatgctgaagggcaaaaatcaggcgttcctcgagctgggtacagaggaggcggcc
gttacaatggtgaactactatacggcagtgacgcctcaggttcgcaacgtccccgtgttc
atccagttctctaaccacaaggagctcaagacagacagtgctctcaaccagcgtgcacag
gctgtcctccaggcagtgtcggcggttcaggagggtggctctcccaactctgacaccagt
gcgctggatagtgttctagcgcaggccccgagcccagtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaatcagttccaggccctgctccagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatttacaactcatgt
tgcacactgcggatcgacttctccaaactggtcaacctcaatgtcaagtacaacaacgac
aagagccgcgactacacccggcccgagctgcccgctggcgacggccagccctccctagat
cctgccatggctgctgccctcaacaaggactcctccctgcttggtaccccctcaggaatg
gtagctccctactctagcggtggagggtttcagtcttctctctcctactcgcagggcgga
ggagccatcagtcctctgagtgctgcggctgcagcggcggcagctgcagggagggtggcg
ctctccggacactctggctgcagcggcgtgctcctggtcagcaatctcaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctctcatccagatgtcggacgggaaccaggcccag
ctcgcgatgagccacttgaacggccagaagatgtatgggaagatcatccgtgtgacgctc
tccaagcaccagacggtgcagctgcccagagaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccgcttcaaaaagccaggctccaagaactttcagaac
atctttcctccgtccgccacgctccacctctccaacgtcccggaggacgtgactgaggag
gatctgagacagctgttctctaatgcaggtggcactgtgaaggcattcaagtttttccaa
ggccacaaaatggcgctactccagatgtctacagtcgaggaggctatccaggccttgatg
gacctccacaactacgacatgggcagcaaccaccacctgaaggtctccttctccaagtca
accatctag
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