Salmo trutta (river trout): 115156842
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Entry
115156842 CDS
T08542
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115156842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115156842
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115156842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
115156842
NCBI-ProteinID:
XP_029560454
Ensembl:
ENSSTUG00000008402
LinkDB
All DBs
Position
2:51927211..51953914
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AA seq
1196 aa
AA seq
DB search
MNVNQQPPMASPYGQPQPGYGQPSYAPLGGGYPGPYGPYSGPATAYQPGAPQGYSTYASF
PSKAVAANPVSDLSSPLDLGSARGPPPVSTNHAYSQYAQGDIQNGPPPMDHSMAQPAHRP
PVSQPYSQGAMNLSGPHPSYPQQYRAQPSMQQMTNQMSGMQVGSGPLTSAGPGYAPPPSS
KPPISAAYSAAAPPSYTQAPPPVSGTPSQPPSEPAAPQPYYDGPPPSQQQHFPSSAPPPS
QPFPSSSPYSGPPPSSQPWAPAVSRQQSFPPGPPTPAQQTFPNSAPPPVSQASYSGPPPS
SQPGPFPPTFAPPAQYPAPQPPSQPGPPPFHSGPPPQCPMPPPSMSQQQANHLPPGPMQQ
PPQPGMQGGYPPQQNGAFGQPRGPQPGYAGPQYPGQQNYGAGPAPTPAPTQKRLDPDSIP
SPIQVIEDDRANKSSEPFTTGVKGQTPPLVTTNFQVKDQGNASPRFIRCTAYNIPCTADM
AKQSQVPLAAVIKPLAMLPPDETRPYIVDHGEAGPIRCNRCKAYMCPYMQFIEGGRRFQC
GFCSCVTDVPPHYFQHLDHTGKRVDCCDRPELSLGSYEFVATVDYCKNNKLPQPPSFIFF
IDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEADSVVRVGFVTYNKVLHFYNVKSSLAQ
PQMMVVSDVSDMFLPLLDGFLVDVNDSRMVIESLLDQIPEMFADTRETETVFGPVIQAGL
EALKAADCAGKLFLFHSSLPIAEAPGKLKNREDKKLVGTDKEKSLFQPQSGFYSNLSKEC
VAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAEMDRERFLNDLRRDVQKPM
GFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAGLDCDKTVAVEFRHDDKLSEDTGALM
QCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDTIINFFSKYAYRSLLNTPTKTV
RDTLVNQCAQILACYRKNCASPSSAGQVSHSHSPPLGQLILPECMKLLPVYLNCVLKSDV
LQPGADVSVDDRAYLRQLLSSMDVSESHVFFYPRLLPLVKLDGGSLPMAVRNSEERLSKG
GVYLLETGLYLFLWVGANAQQELLSNIFGTPTFSQIDPNMTSLPELDNPFSQRLREIIDS
FRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKSACGGASYVDFLCHMHKEIRQLLS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaccagcagcctcccatggcatctccgtacggccagccccagcctggctac
ggccagcctagctacgctcccttgggaggtggctaccccggcccctatggaccctacagc
ggccccgctacagcctaccagcctggggctccacaaggttattctacctatgccagcttt
ccctctaaggctgtggcagctaacccagtctctgacctgtcctctcctcttgacttggga
tctgccaggggcccacctccagtatccaccaaccacgcctactcccagtatgcccaagga
gacattcagaatggacccccacctatggatcactctatggctcagccagctcacaggcct
ccagtgtctcagccgtatagccaaggtgctatgaacttgtcggggccacacccttcttac
ccccagcagtaccgggcgcagccctccatgcaacagatgaccaatcagatgtcagggatg
caggtcgggtcaggccccctcacctctgctgggccgggatatgctccaccgcccagctcc
aagcctccaatcagtgctgcctactctgctgcagcccctccctcctatacacaagctcct
cccccagtgtctggtaccccctcccagcctcccagtgagcctgcagccccccaaccttac
tatgatggcccccctccctctcaacaacaacacttcccctcctccgccccccctccctcc
caacccttcccctcctcctctccatactcgggccctcccccttccagccaaccttgggcc
cctgcagtctctcgacaacagtccttcccacctggcccccctacccctgctcagcaaacc
ttcccaaactctgctcctcctccagtctcccaggcctcgtactctggcccccctccctcc
tcccaacctggccctttcccacctacctttgcaccccctgcccagtaccctgccccccag
cccccgtcccaacccgggccccctcccttccactctggcccccctccccaatgccccatg
ccacccccctccatgtcccagcagcaggccaaccaccttcctcctggccccatgcagcag
cctcctcagcctggcatgcagggaggatacccaccccagcagaatggtgcatttgggcag
cccagaggcccccagcccggctatgcaggcccacagtatcctgggcaacagaactacgga
gctggccctgctcccacccctgcacccacacagaagagactggaccctgactccatcccc
agcccgatccaggtgattgaggacgaccgggccaacaagagcagtgagccgttcaccacg
ggggtcaaaggtcagactccgccccttgtcaccaccaacttccaggtgaaagaccagggc
aacgccagcccgcggttcatccgctgtacagcctacaacataccctgcacggccgacatg
gccaaacagtcccaggtccccctggctgccgtaatcaaacctctagccatgttgccccct
gacgagacccgtccgtacatcgtggaccatggggaggccggtcctatccgctgtaatcgc
tgtaaggcctatatgtgtccctacatgcagttcatcgagggcggacgccgcttccagtgt
ggcttctgcagctgcgtcacagacgtgcctccccactactttcagcatctggaccacaca
gggaagagggtggactgctgtgaccggccagagctctcgctgggcagctacgagtttgtg
gcaaccgtcgactactgtaagaacaataagctcccccagcccccgtcgttcatctttttc
atcgatgtgtcttacaacgccgtgaagagtggcatggttaacatcgtctgtcaggagctc
aagactctactggactacctgcccagggagaatccagaggcagactcagtggttcgcgtg
ggttttgtgacctataacaaggtgttgcacttctacaacgtcaagtccagcctggcccag
ccccagatgatggtggtcagtgacgtcagtgacatgttcctccctctgctcgacggcttc
ctggtcgacgtcaacgacagccggatggtcatcgagagtttgctagaccagattccggag
atgtttgcagacaccagggagactgagacggtgtttggaccagtcatccaggcaggactg
gaggcactgaaggctgcagactgtgccgggaagctgtttttgttccactccagtctgcca
atcgctgaggctcctgggaaactgaagaacagagaggacaagaaactggtgggaacagac
aaggagaagtctctgttccagccccagtctggtttctatagtaacctgtctaaggagtgt
gtagcacagggctgctgtgtggacctcttcctgttccccaaccagtacgtcgacgtggca
acgcttggcgtggtgcccgtctccactggcggctcagtctacaaatacacctacttccag
gctgagatggaccgcgagcggttcctgaatgatctgcggcgagacgttcagaagccgatg
ggctttgacgcagtcatgagggtccgaacgagcacaggtatcagagcgacagatttcttc
ggctcgttcttcatgagtaacacgacagacgtggagctggcaggactggactgtgacaag
actgttgccgtggaattccgccatgacgacaagctcagcgaggacacgggggcactcatg
cagtgtgcggtgttgtacaccagctgtagtggtcagcggcgtctgagggtccacaacatg
gcggtcaactgctgctcccagctcgccgacctctaccggaactgtgagacagacacaatc
atcaacttcttctccaagtatgcgtaccgcagcctattgaacacccccaccaagacggtg
agagacaccttggtgaaccagtgtgcccagattctggcctgctaccgcaagaactgtgcc
agcccctcgtctgccggacaggtcagtcactcacacagcccccctcttggacagctgatc
ctaccagagtgtatgaagctgttgccggtctatttgaactgtgtgttgaagagcgatgtg
ctgcaaccaggagctgacgtctcagtagacgacagagcctacctgagacagctgctcagc
tctatggacgtatcagagagccacgtcttcttctatccccgcctacttcccctggtgaag
ttggatggagggtcgttgccaatggcagtgcgtaactcggaggagcgcctgtcaaagggt
ggagtctacctcctggagacagggctctacctcttcctgtgggtgggagccaatgcccag
caggagctgctcagcaacatcttcggcacgcccaccttcagccagatagaccccaacatg
acgagtctgccagagctggacaacccgttctcccagagactcagagagatcatcgactcc
ttcagatcacaacggtcacgatacatgaagttgatggtggtgaagcaggaggacaaggcg
gagctaatctttaaacacttcctgtgtgaggacaaaagcgcctgcggaggagcttcctac
gtcgacttcctgtgtcacatgcacaaggaaatccgccagctgctcagctag
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