Salmo trutta (river trout): 115156856
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Entry
115156856 CDS
T08542
Name
(RefSeq) GRB10-interacting GYF protein 2-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115156856
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115156856
Surveillance factors
Other surveillance factors
115156856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
115156856
NCBI-ProteinID:
XP_029560492
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All DBs
Position
21:complement(17831453..17876853)
Genome browser
AA seq
1424 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPGRKESEVAPAHFPMNHIRANYEDVGTGVGGLPVRKHDFTRSESENWRTSRDE
ANGEDGDEGGWRLAGALRRDSDRWCPPSPDGLRSAVRREVHPVEQPRQRRFPFDAREDER
GYRRPRSGSGSLEEDGGSLPEWCLEDAEEETGTFDSSGAFLSLKVRKAPKEPILEEAELD
FRPLEECDEGLEEDGQPRETKNPDGEARRDPDRKQDVGRGVVEAPPAPSPPEPRPAAPLL
PPSQPDRAEEPERPLERPPAPEHKPEANKVPLHVPMSMPMSNTMLESLPIPHTAAHTLTV
SPVSAPSSTIQMQQKPPDVPVAMPVPLPFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPT
VMPPHHTMVEDERLKHFEQEAEKMVAYLQDSDDRLAAKSSAPKPAGLPLTHEAALKWFYK
DPQGEMQGPFSNPEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPP
PLLGDAGDQERLKLQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQ
QQQQQINLLLQQYQALKMRSAEHTTSESLLPPVTRSMSVPDSQGSVWEMQHPSSQVSCTP
NIQQPAPSAWEGSSVWDLPIDSMAQAPTIEQMQQLEKNKAAKVSPPHLLEMERHEAELRA
KREEEEKERKRLEEALRARQEEERKRLEEELARHKQEEELRQREQEEAQRRQKEEEERQA
QEEALRRLEERRREEEERKQREEFLRKQEEERRKQEEERRKQEEERREEERRKQEEERQK
QEELEALRRCEEEKRLEEAAAVALARQQQEEAKRREQDAARQQELARQRQQQQEALRRLQ
QQQQQQQLAQMKLPSSSKWGQQSAVTAVAISQSQNALSLAEIQKVEEERERQAREEQRRQ
QAELLKLQQQQALQEALQPQAKLSGWGSVAKQPAATKSLLEIQREEAQQVKQRKEQGGGS
QQPSHPTVTQQNRAQNRATTALSSSVWGSVATSSMGGGAPNWGGESSSIWGDSTNSNMGF
WDEAVKEAAQPPPQAPPPARKPNAQKNNKANANLSSRANKKVVEEEEKLLKLFQGVNKSQ
QDGFMQWCEQTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQF
LERRAKQKANQQKEPQAPQNQQPTLKQQQQQQDSVWGVSGTGSQSRYQSNHTSLQQQARF
ETVTSGKKKKKQKMVRADPSLLGFSVNAASERLNMGEIETVEDF
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccaccactctctcctgcattg
ccaaagtataaacttgcggactaccgctacgggagagaagaaatgctagcactttatgtc
aaggatagggagatccctgtagacctacatgataaggattttctgcccattttacaagag
gagcccctgccaccgctggcacttgtagcttttacagaggaagagcagagaaatttctcc
atgtctgtaaacagtgcagcggtgctcaggctgatgggaagaggagggggtccggtgggg
ccaggggcaccgaggggtcgaagtacttcacggggaagaggacggggtagaggagacgga
gggttttaccaaagaagttttgatgacgtggagggaggctttggccgcggaggcagggag
atgcaccgctcccaaagctgggaggagagtcacgctgagtctattttctccccatctagg
ggagacagaaggtttgaaaagccaggaagaaaagagtcagaagttgctcctgcccacttt
ccgatgaatcatatccgtgctaactacgaggatgttgggaccggcgtgggaggcctgcct
gtgaggaagcacgattttacacgctcagagagtgagaactggcgcacgtcccgcgacgaa
gcaaatggtgaggacggtgacgaggggggctggcgcctggcgggtgccttgcgacgcgac
agcgaccggtggtgccccccgagtccagacgggctgcggtcggcagtgcggcgagaggtg
cacccggtggagcagccacggcagcgccggttcccgttcgacgccagagaggacgagcgc
ggctacaggcgtccccggtcaggcagtggcagcctggaggaggatgggggcagcctgcca
gagtggtgcctggaggacgctgaggaggagacgggcaccttcgattcctccggagccttc
ctctcgctcaaggttcgaaaagctcccaaggagcccatcctggaggaggcagagctggac
ttcagacccctggaggagtgtgacgagggccttgaggaggacggacagccccgggagacc
aaaaacccagacggagaggcaaggagagaccccgacagaaaacaggatgtggggagaggg
gtagtggaggcgccgcctgctccctcgcctccagaaccccggcctgccgcccctctgctg
ccccccagccagcccgacagagcagaggagcctgagaggccacttgagcgacccccagcc
ccggaacacaagccagaggccaacaaagtccccctgcacgtccccatgtcgatgcccatg
tccaacacaatgctggagtccctccccatcccccacaccgcagcacacactctcacagtg
tctccagtgtcggccccttcgtccaccatccagatgcagcagaagcccccggatgtgccc
gtggctatgcccgtcccgctgcccttcagcaccagcctcatggctcagagcacgtctatc
atgacccccaacattatggcccccagcacgggcctcatggctcctattggaagacccacg
gtcatgccaccacaccacaccatggttgaagatgagagactgaagcactttgaacaggaa
gcagagaagatggtggcgtatctacaggacagtgacgaccggctggctgccaagagctca
gcacccaaaccagctggcctgccgctcacacatgaggctgctctgaagtggttctataaa
gacccccagggagagatgcagggtccattcagtaacccggagatgacagagtggttccag
gcaggctacttcacaatgaccctgctggtgaagagaggctgtgacgaggtcttccaaccc
ctgggggagatcatcaaaatgtggggcagggtccccttcgcccctggaccagcaccgcca
cccttactgggtgacgctggggaccaggagcgtctgaaactgcagcaggagctgactgcc
ctcaacctgtaccagctgcagcagctgcagtaccagtacctgttaaggcagcagtatgcc
caggccctggcccagcagaaagcccaggccctcagctcagcgccacaccagcagcagcag
caacagcagcagcagatcaacctgctcctccagcaatatcaggccctgaagatgaggtca
gcggaacacacaacatccgagagtctcttacctccggtgacgcggtccatgtctgtacca
gactcccagggttctgtgtgggaaatgcagcacccctcctctcaggtctcttgcacacca
aacatccagcaacctgccccaagtgcgtgggagggcagcagtgtgtgggatctgcccata
gactccatggcccaggcccccaccatagaacagatgcaacagctggagaagaacaaggct
gctaaagtctctcctcctcatctactggagatggagcggcatgaggctgagctgagggcc
aagagggaagaggaggagaaggagaggaaaagactggaggaagcgttacgggcccgacag
gaggaggaacgcaaacgcctggaggaggagctagcacgtcataaacaggaggaggagttg
aggcagcgggagcaggaggaggcacaacgcagacagaaggaggaagaggaacggcaggca
caggaggaggccctccgccgactggaggaaaggaggagggaggaggaagagcggaagcaa
agggaagagttcctccgtaaacaggaggaggagcgccggaagcaggaggaggagcgccgg
aagcaggaggaggagcgccgggaggaggagcgccggaagcaggaggaggagcgccagaag
caggaggagctggaggccctgaggaggtgcgaggaggagaagcggctggaggaggcggcg
gcggtggcgttggcacggcaacagcaggaggaggcgaagaggagggagcaggatgccgcg
aggcagcaggagctagccagacagaggcaacagcagcaggaggcgctccgccgactacag
cagcaacagcagcagcaacaattagcccagatgaagctgccgtcgtcctctaagtggggc
cagcagtcagcagtcacggcagtagccatctcccagtcccagaacgccctgtcgctcgct
gagatccagaaagtggaggaggagagggaacgacaagcacgagaagagcagcggcgccag
caagcagagctcctgaagctccagcagcagcaggccctgcaggaggccctgcagcctcag
gccaagctctctggttggggcagcgtggccaagcagccggccgccaccaagtccctgctg
gagatccagagggaggaggcccagcaggtgaagcagaggaaggagcagggtggtgggagc
cagcagcccagtcaccccaccgtcacccagcagaaccgcgcccagaacagagctaccact
gctctgagttcctcagtgtggggctcggtggccaccagcagcatgggcggcggggctcct
aactggggcggggaaagcagcagcatctggggcgacagcaccaactccaacatgggcttc
tgggacgaggcggtgaaggaggcggcccagcccccgccacaggccccaccccccgctagg
aagcccaacgctcagaagaacaacaaggccaacgccaacctcagcagtcgggccaataag
aaggtggtggaggaggaggagaagctgctgaagttgttccagggggttaataagagccag
caggatggcttcatgcagtggtgtgagcagaccctgcacaccctcaacaccgccaacaac
ctggatgtcccgacatttgcgtctttcctgaaggaggtggacagtccgtacgaggtgcac
gactacgtgcgcgcctacttgggggacacgtccgaggctaaggagtttgccaagcagttc
ctggaacgccgtgccaagcagaaggccaaccaacagaaagagccccaggccccacagaac
cagcagccgactctcaaacagcaacagcaacagcaggattcagtgtggggcgtgagcggg
acgggctctcagtctcggtaccagtcgaaccacacaagcctccagcagcaggcacgtttc
gagaccgtcacctcagggaagaagaagaaaaagcagaagatggtccgggcagaccccagc
ctgctaggtttttctgtgaacgcggcgtctgagaggttgaatatgggcgagatagagacg
gtggaggacttttaa
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integrated database retrieval system
