Salmo trutta (river trout): 115156865
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Entry
115156865 CDS
T08542
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00061
Fatty acid biosynthesis
stru00071
Fatty acid degradation
stru01100
Metabolic pathways
stru01212
Fatty acid metabolism
stru03320
PPAR signaling pathway
stru04146
Peroxisome
stru04216
Ferroptosis
stru04920
Adipocytokine signaling pathway
Module
stru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115156865
00071 Fatty acid degradation
115156865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115156865
09143 Cell growth and death
04216 Ferroptosis
115156865
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115156865
03320 PPAR signaling pathway
115156865
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stru01004
]
115156865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115156865
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115156865
Lipid biosynthesis proteins [BR:
stru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115156865
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of breast milk
115156865
Exosomal proteins of breast cancer cells
115156865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115156865
NCBI-ProteinID:
XP_029560508
Ensembl:
ENSSTUG00000025836
LinkDB
All DBs
Position
21:19168675..19202951
Genome browser
AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNHEDGSQQKLVSSLHPGVDTLDKVMDYGAARFPERNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETHQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKDILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMVVARRRPVPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYK
TPLCDSLVFGKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLICSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLMALAEQRGLRGSWEEICNNPDMERDVLHIITEA
ALSAKLERFEIPRKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccactgctgctgcaggtcttccgctcggttgtctgg
gtctactcggtcatcaccttcctgccctggtacctgctctcgggcgctggagccaaccta
gaccgggcgcggcgggtcaaggcgcggtcagtgagtggtcgcccggcgggcccttaccgg
gcgaccaaccatgaggatggtagccagcagaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggattatggagcggccaggtttccagagaggaactgcctg
ggcacaagagaggtgctgagtgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtatgaggagacccaccaggcagcagtg
tgttttggcagtgggctggccgctctaggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggccgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccattgcccatggtctgaacgagact
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggacattctg
ttggaggtgcctcggctgcagcacatcattgtggtggacagtaagccaaccagttggccc
ggcttcccccgcggcatcatggtccacaacatggacgccgtgcaagagctgggctccaga
cccgacaacatggtggtggcgcgccggcggccggtgccctccgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcgtcacaggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctgccgctggcccatgttctggagctgagtgcagagatggtgtgcatctctcac
ggctgttgcatcggatactcctccccacagacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcggatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctctttgtgttggcctacaactataagatggaacagatcaccaagggctacaag
accccgctctgtgacagtctggtgtttgggaaagtgcgctcgttgttggggggtcacatg
agggtgctgttgtcgggcggagcgcccctctccgccgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggcgctggcacc
atcagcgagatgtgggactatagcacaggccgggtcggcgctcctctgatctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccgaga
ggggagattgtaatcggcgggcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacaggagacatc
ggggagtttcacccagacgggtgcctcaagattatcgaccgtaagaaggacctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgcgcctacgcaaacagtgaccagtcgtacgtgattggcttcgtg
gtgcccaatcagaagcagttgatggcgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgttctccacatcatcacagaggcc
gctctgtcagccaaactggagcgctttgagatccctaggaagatccgccttagtgcagag
ccctggaccccggagactggcctggtgaccgacgcgttcaaactcaaacgcaaggagctc
aaatcacactatcaggaagacattgagagaatgtatggcggcaagtaa
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