Salmo trutta (river trout): 115156868
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Entry
115156868 CDS
T08542
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
stru04520
Adherens junction
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115156868
09144 Cellular community - eukaryotes
04520 Adherens junction
115156868
04530 Tight junction
115156868
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115156868
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115156868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115156868
NCBI-ProteinID:
XP_029560515
Ensembl:
ENSSTUG00000031429
LinkDB
All DBs
Position
21:complement(19432340..19678856)
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AA seq
1396 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTNSLERKGSGPDTYRSLPRDAGTCANQREFQRETARSSLSANHPMV
DRWLERREQDEEEENNRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPFS
ARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSPV
IMFHVVPNLMKAQYEQLSHSERNPNVAYSGRFSPDSLASERGSTTSGLDHTPQSRGPHPH
HHPEQGDAYTPLPHPHGGSMGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLKKGPE
GLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEEVVA
LLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLRRSVREAVSATEPHWLTEKVEEDDL
VLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRL
RVNDQLIAVNGESLIGKTNQEAMETLRTSMSVEGNKRGTIQLIVARRVTKRSELEAPGSP
LGPEQALLNSSLLEDRERRISHSLYGGIEGLDDNLMPQQALMDRMMGNYQLSPTVNMPQD
DTVIIEDDRPPVLPAHLSDQSSSSSHDDMGFHMEVPPTWAKEIPIQNESTLSPDDSDPDG
AFQREGFGRQSMSEKRTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRD
VGPSLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPA
ATEEDDEGMETLEEDTEESSRSGRDSVSTVADLTPLPNTERSLVNGNRTNEDKKKDKGGK
DKKKPDRDKEKDSKNKAKKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRM
KLEQERIQAKTRELRERQARERDYAEILDVNLSRDDEHPYAGIGPLDTSLDSGHSRPQSP
RDNHHRDSSMYTQVGKTRNANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRR
RTYSFEQPWPNNTNTGPSPYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLP
RQPRKNPSSISQDSWDKVYPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQE
LLRQEQRRREQEAKGKQLLLAPPQEHPGNNTYDGYSAHKDPVSPKGPYRQDVPPSPSQLA
RLNKLQGPEKGRPFYS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccatgcggagatggaaat
atcaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttggagcatggggacggaggcattctagac
ctcgatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagcgccagctccacgggaacccagagc
cccgacctgttcgccaccgagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctacatgtg
cgtcgcagcagtgacccggccctggcgacgatcaatgggccattcagcgacccccgcgtg
accctgccgccggagaaaccgtccaggaagaaccccacccgctggtccaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcaccggcactggcaccaatagcctggagaga
aagggtagtggtccggacacgtaccgtagtcttccccgggatgcaggcacctgcgccaac
cagagagagttccagagagagacggcccgttcctccctgagcgccaaccaccccatggta
gaccgctggctggagagacgggagcaggatgaggaggaggagaacaataggatcgagccg
attggccgagctgattcctgtatggaccacacccctctgaggtccctagatgacattgta
aagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttcagt
gcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaaggcg
caggagcagggtctgttccaggagaacgactgcatcgtgcgcattaataatggagacctg
cggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttccccggtc
atcatgttccacgtggttcccaacctgatgaaggcccagtatgagcagctgtcacacagc
gagaggaaccccaacgtggcctactctggacgtttcagccccgactccctagctagcgag
agaggcagcaccacctcaggcctggaccacaccccacagtcccgtggtccccatccccac
catcacccggagcagggcgacgcctacacccctctaccccacccccatgggggctccatg
ggcaagcccccatccggccacgccccctcccctcacagggtgttaaactcaacccccacg
gcgggcttcaccaaaaaggttggcaggagactcaacatccagctcaagaaaggtccagag
ggtctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcggcgcccatctac
gtgaagaacatcctgccccgaggcgctgccatccaggacggacgcctcaaagctggagac
aggctgctggaggtgaatggagtggacttggttggtcggacccaggaggaagtggtcgct
ctgctgagggccacgcctatgggaggagctgtggggctggtggtgctacgacaggaggag
accttcctgaatgcagagccccagatgcagagccccagagatttgcgtcgctcggtgagg
gaggccgtgtcggccacggagccccactggctgactgagaaggttgaggaggatgacctg
gtgttgacccctgatggtaccagggagttcctgacctttgagatccctctgagtgactcg
gggtcggcagggttaggggtcagcgtcaagggcaaccgctccaaggagaaccacgctgac
ctaggcatcttcgtcaagtccataatcaacggaggagctgcctgcaaggatagacggctg
cgggtcaacgaccagctgatagcggtgaacggggagtcattgataggcaagaccaaccag
gaggccatggagacgctaaggacgtccatgtcggtagagggcaacaaacgcgggacgatt
cagctgattgtggccaggagggtcaccaaacgcagtgagctggaggccccagggagcccc
ctgggaccggagcaggccctcctgaactcctccctgctggaagaccgggagcgtcgtatc
tcccactccctgtacggaggcatagagggcctggacgacaacctgatgccacagcaggct
ctgatggacaggatgatgggtaactaccagctctcccctacggtcaacatgccccaggac
gacactgtcatcatcgaagacgatcggccacctgtacttcctgcccacctctctgaccaa
tcgtcttccagttcccatgacgacatggggttccatatggaggtccctccaacttgggcc
aaagaaattccaattcagaatgagagcaccctgagccctgatgacagtgacccagacgga
gcctttcagagggagggcttcggcagacagagcatgtcagagaaacggacaaagcagttt
ggagatgccagtcagctggagatcatcaagacacgcaagtccaagagcatggatctagta
gccgacgagattaacctcacccctcgcaaagagaacacaccagggtcttccaccagggac
gtgggtccctccctaggcctcaagaagtccagctctctggagagtttacagaccgccgtt
gccgaggtgacgctcaacggtgacatgcccttccacaggccacgcccacgcataatcagg
gggcgtggctgtaacgagagcttccgggccgctattgacaagtcttacgacaggccagca
gccaccgaggaggacgacgagggcatggagacattggaggaggacacagaggagagctct
cggtccgggcgcgactctgtgtccactgtggcagatctgacaccactgcccaacacagag
agatcgctggtcaacggcaaccgcaccaatgaagacaagaagaaggacaagggagggaaa
gacaaaaagaagccagaccgggacaaagagaaggacagcaagaacaaggctaagaaaggc
atgctgaaaggactgggagacatgttcaggtttggaaaacaccgcaaggacggagagaaa
ctagagcgtaaagggaggctggaggagctgcaggcctcagaagaagagacactgaggatg
aaactagaacaggagaggatccaggctaagacccgggagctgcgggagcgccaggcacgg
gagagggactacgctgagatcctggatgtcaacctgagccgagacgacgagcacccctac
gcaggcatcgggcccctggacacgtccctggacagcgggcacagccggccccagagcccc
cgagacaaccaccaccgagactcctccatgtacacacaagtcggcaaaacccgcaatgca
aatggacgccctccctccgccgacagcaacagactagcgcctagcaaccacgaccggata
cagcggctgaggcacgagttccagcaggccaggggggacgacgaccctgacgaccggaga
cgcacctacagcttcgagcagccctggcccaacaacaccaacacaggcccaagcccgtac
cagacagacggacaacagacaggccgacactctgtgtctgtagaggtgcagagacagaga
cagaggcaggaggagagagacgccttccaacaggcgcagagacagtacagctccctgcca
cggcaacccaggaagaaccccagctccatctcgcaggactcctgggacaaggtctacccg
ccgggtgatggcttccagacggccaaggagaaccctcgctactctagctacaagggctcc
agaaacggctacccggggatgagcggcgtgaatgcccgcgtcctcctggaggcccaggag
ctgctgaggcaggagcagagacgcagggagcaggaggccaaagggaagcagctactccta
gcgcccccgcaggagcaccccgggaacaacacctatgacgggtactcggctcacaaggac
cctgtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccagctggcc
aggctcaacaagctgcaggggcccgagaagggaaggcccttctactcctga
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integrated database retrieval system
