Salmo trutta (river trout): 115157346
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Entry
115157346 CDS
T08542
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115157346
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115157346
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
115157346
NCBI-ProteinID:
XP_029561380
Ensembl:
ENSSTUG00000010766
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Position
21:36879041..36883325
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AA seq
1006 aa
AA seq
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MGMRGWNWWVLVGIPLAVLPTLTQGKTVKYETFEEDAPATVIGNLAKDISSSPSSSSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLVAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGLNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGSTRINIKVKDYNDNSPV
FDRSSFTVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFDVQATDLGLNPSPAICKIVVRVQDVNDNAPEISITPMTSITAG
IAYITEAASRESFVALVSTSDMDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKSVYEVAVEENNAPGAYIT
TVVARDMDLGQNGKVIYKLTDTYIMGSPVSTFVSLDPASGSIYALRSFNYEVMKQLQLCI
TASDGGSPPLTGTASIHVRIVDQNDNAPVINQPALNNGSSEILLPWDAPSGYVITRVEAR
DADEGVNAELSYRLASGEGSMFSVNKATGEVYLNRELSHDVDETLRMTVTVSDNGRPALT
ATATLHFLIIVGAPPSDRTVYWAGSGEAGEHAQWDLSVVIIVVLAGSCTLLLLAIILIAT
TCNRRKRDKTGDDTDSYGEKEILERGKNISDNPLLPLHGTVGGFEAHTFSSQPGFTGTHT
GSSDLCSTSEDGREAPCVYEPDSKPKGYSTLPGYGNSYNNGKEAVRPITIWKGNSYTTIS
ARDPAFSGKDSGKGDSDFNDSDSDISGTDLKKEGVPVHPMGCHSGLWACTSECKVLGHSD
RCWSPSAVRAHIGPSLVPTPTSQTVSSFNSLSKTASLPRDSLRRDNYYQAHIPKTTGLQS
VYEKVLHKEYDYVLVTPPRSLRVQEISEITIPVYGPTTTRCPSNEV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagagggtggaactggtgggtgctggtgggcatcccactggctgtcctgccc
actctcacgcagggaaagacagtgaagtacgagacatttgaggaagacgccccggccact
gtcattggaaacttggccaaggacatttcatccagcccctcctccagctccaagacaaat
ttccggatgatgaaacagttcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatctgtaaacacacccttcactgcctc
gtcgcctttgatgtggtcagcttctccaaagagcagttcaaactcatccacgtcgaggta
gaggtcaaggacatcaacgacaattcccccgagtttccacggaaagaatcgagtctggag
atctccgaaaacacagcggtgggcacgcggatcccgttagacttcgctgtggatgaagat
gtggggttgaattacatccagagctaccagatctccgttaacagtcacttcaccatagac
gtgctcagcagagccgacggggttaaatatgcggagctcgtgctcatgaaggagctggac
cgtgagacacaggcttcctatgcgctcgagctggttgctatggacggcggcaacccgtcc
cgcacgggatccacgcgcatcaacattaaggtgaaagactacaatgacaacagccccgtg
ttcgacaggagcagtttcacagtggacctccctgaggacgcaccagtagggtttctctta
ctggacctgaacgcagaagacccggatgaggggctgaatggggaggtggtgtatggtttt
ggtcaccaggtgccatccgagataagacaacttttcagagtggaccgcaaaacgggacgg
ctcaccctcgagagccccattgactttgagagcaagaaaacgtacgaattcgacgtccag
gcgactgacctgggtctgaacccaagcccggccatctgtaagatagtggtgcgggtccag
gacgttaacgacaacgcgccagagatctccatcactcctatgacgtccatcacggctgga
attgcctatatcacggaggctgcatcgcgcgagagttttgtggcgctggtcagcacctct
gacatggactctggtgctaacggacaggtgcactgtacgctctatggccacgaccacttc
aggctgcagcaggcgtacgaggacagcttcatgatagtgagtacgagcccgttggaccgg
gagaagatccctgagtataatctaacagtggtggcagaggacttgggctccccaccgttc
agaaccatcacccagtacaccatccggttgatggacgagaatgacaatgcccctgtgttc
agtaaatcggtgtatgaagtggctgtggaggagaataacgccccgggggcctacatcacc
actgtggtcgccagggacatggacttgggacagaacgggaaggtgatctacaagctcact
gacacctacatcatgggctccccggtgtctacgtttgtctcactggaccccgcgagcggc
tccatttacgcactcaggagcttcaactatgaagtcatgaaacagctccaactctgcatc
acagccagcgacggcgggtccccgcccctcaccggaaccgcaagcattcatgtcaggata
gtggaccagaatgacaacgcacctgtcatcaaccagcccgcactaaataatggttcctct
gagattctgctgccctgggacgcgccctcgggctacgtcatcacccgggtggaggcgcga
gatgctgatgagggcgtgaacgcagagctgtcctacagactggcctctggagagggttcc
atgttctccgttaacaaagccaccggggaggtctacctcaaccgcgagctcagccacgac
gtggacgagaccctgcgcatgaccgtcacggtgagtgacaacgggagacctgcgctcacc
gccaccgccacgcttcatttcctcatcattgtgggcgccccgccgagcgacaggacagtg
tactgggcaggcagcggggaggcgggggagcacgcacagtgggacctgtcagtggtgatt
attgtcgttctggcggggagctgcacgctcctgctgttagcaatcatcctcattgccacc
acctgcaaccggcggaaacgggacaagactggagatgacaccgactcgtatggggagaag
gagatcctggaaaggggcaagaacatcagcgacaatccactgctgccgctccatggaacc
gtgggagggtttgaagctcacaccttctctagccagcccgggtttactgggacacacact
ggcagcagcgacctgtgctccacctctgaggatgggagagaggcaccatgtgtctacgaa
ccggacagcaaacccaagggctactccactctgcccggctacggtaacagctacaataac
ggtaaagaggcagtcagaccaatcacaatctggaagggcaactcctacaccaccatttcc
gcgagagaccccgcgttcagcgggaaggacagcgggaaaggcgacagtgactttaacgac
agtgacagtgacatcagtggcaccgacctgaagaaggagggggtaccggtacaccccatg
ggctgtcacagtggtctatgggcatgtaccagtgagtgtaaggttctgggccactctgac
cgctgctggagcccctcggctgtccgtgctcacattggtccctcactcgttcccaccccc
accagccagactgtctcctccttcaacagcctttccaagactgcctcgctgcccagggac
tcgctccggagggataactattaccaggcgcacatccccaaaacaacgggcctgcagagc
gtgtatgagaaggtgctacataaggaatatgactatgtcctggtcactcctcccagatcc
ttgagagttcaggagattagtgaaatcactatcccagtctatggtccgaccacgacacgg
tgtcccagcaatgaagtctaa
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