Salmo trutta (river trout): 115157395
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Entry
115157395 CDS
T08542
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115157395
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115157395
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115157395
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115157395
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115157395
NCBI-ProteinID:
XP_029561464
Ensembl:
ENSSTUG00000039738
LinkDB
All DBs
Position
21:39072815..39092465
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AA seq
712 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYSEVQKHQKNQEVLNQEVVNQGCLNQG
LSLTREDVAGGDSEGDRHRELSHSYSSGGSSSTLSDLDDIPDLFDLPLTPEEAHEYCSLE
LLGGHGGSTGNTSNSSSSSSSNNSSNQNSPQQNLLDVTDASGIKHEYQMLSHTKAAQLEP
LAEDCTLMDIERITQSVPFLFQSVSPTVCRFCFRAYHPQCAVSVSERITHSVPFLFQSVS
PTVCRFCFRAYHPQCAVSVSERITHSVPFLFQSVSPTVCRFCFRAYHPQCAVSVSERITH
SVPFLFQSVSPRVCRFCFRAYHPECAVSVSGRITQSVPFLFQSVSPRVCRFCFRAYHPQC
AVSVSERITQSVPFLFQSVSPRVCRFCFRAYHPECAVSVSERITQSVVKSHLETSQYSSD
DLKRLTYSGIQYSPEETRNFQCKSEEFMWQQCAHHITNAIQYVVEFAKHITGFMDLCQND
QIILLKAGCLEVLLIRMCRAFNANTNTMFFDGKFASAQLFKALGCDDLVSAVFDLAKGLC
RLQLTDEEMALFSAAVLLSPERPWLTDSQKVRKLQEKLFLALQHSLHMSGAADEKLDQMV
SKLLMMKSICNLHVNKLEFFRLVHPETAYSFPPLYREVFGSEISLPDSTKSS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggtatc
cactatggggtcattacctgcgaaggttgcaagggattcttccgccgcagccagcagaac
aatgccatgtactcgtgttcccgccagagaaactgtcttattgaccgaaccaaccgcaac
cgctgccaacactgcagactgcagaagtgtctggctttgggtatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgagacagcctgtactctgaggttcagaagcac
cagaagaaccaggaggttctgaaccaggaggttgtgaaccaggggtgtctgaaccagggt
ttgtccctgaccagggaagatgtggcagggggagacagcgagggggacaggcacagggag
ctcagtcactcctacagcagcggcggctccagctccaccctgagtgacctggatgacatc
cccgacctgtttgacctgcccttgaccccggaggaggcccacgagtactgcagcctggag
ctgctgggaggccacggcggaagcaccgggaacacctcaaactcttcatcgtcatcatcc
tctaacaattcatccaatcagaactcgccgcagcagaatctgctggatgtcaccgacgcc
agtggaatcaaacatgagtaccagatgttgtcgcacacaaaagctgcacagctggagcca
ctggccgaagactgcactcttatggatatagagcgtatcacccagagtgtgccgtttctg
tttcagagcgtatcacccacagtgtgccgtttctgtttcagagcgtatcacccacagtgt
gccgtttctgtttcagagcgtatcacccacagtgtgccgtttctgtttcagagcgtatca
cccacagtgtgccgtttctgtttcagagcgtatcacccacagtgtgccgtttctgtttca
gagcgtatcacccacagtgtgccgtttctgtttcagagcgtatcacccacagtgtgccgt
ttctgtttcagagcgtatcacccacagtgtgccgtttctgtttcagagcgtatcacccac
agtgtgccgtttctgtttcagagcgtatcacccagagtgtgccgtttctgtttcagagcg
tatcacccagagtgtgccgtttctgtttcagggcgtatcacccagagtgtgccgtttctg
tttcagagcgtatcacccagagtgtgccgtttctgtttcagagcgtatcacccacagtgt
gccgtttctgtttcagagcgtatcacccagagtgtgccgtttctgtttcagagcgtatca
cccagagtgtgccgtttctgtttcagagcgtatcacccagagtgtgccgtttctgtttca
gagcgtatcacccagagtgtggtcaagtcccacttggagacgagtcagtacagttctgac
gacctgaagaggctgacatacagtgggattcagtactcacctgaggagacccgcaacttc
cagtgcaagtctgaagagtttatgtggcagcagtgtgcccaccacatcaccaatgccatc
cagtatgtggtggagtttgccaaacacatcactggcttcatggacctgtgtcagaacgac
cagatcattctgctcaaagcaggctgtctggaggtgctgttgatcaggatgtgcagggcg
tttaacgctaacaccaacaccatgttctttgatggcaagtttgcctccgcccagctcttc
aaagccctcggttgcgatgacctggtcagtgccgtgtttgacttggctaaaggtctctgc
cgcctgcagctgaccgatgaagaaatggctctgttcagcgctgctgtccttctgtcccca
gagcgaccatggctgaccgacagccagaaggtccggaagctgcaggagaagctcttcctg
gctctgcaacacagtctgcacatgagcggggctgccgacgagaaactagaccagatggtg
tctaagctgctgatgatgaagtccatctgtaatctccacgtcaacaagctggagttcttc
cgtctggttcaccccgagactgcatacagcttcccaccactctatcgggaagtgttcggg
agtgagatctctctacccgactctacaaagagctcctag
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