Salmo trutta (river trout): 115157410
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Entry
115157410 CDS
T08542
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115157410
Membrane trafficking [BR:
stru04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115157410
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
LRRNT
LRR_6
LRR_9
C2-set_2
V-set
Motif
Other DBs
NCBI-GeneID:
115157410
NCBI-ProteinID:
XP_029561493
Ensembl:
ENSSTUG00000041459
UniProt:
A0A674DCW1
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Position
21:complement(39511059..39610605)
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AA seq
622 aa
AA seq
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MTGSPGTSGQSLSPWRWLSLWGPVLLLVTMTTLLPGCCQACPPRCECSAQIRSVLCQRRR
LTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFANLQSL
RVLRLRANQLKLVPMGAFAKLVNLTTLDLSENKLVILLDYTFQDLRSLRHLEVGDNDLVY
ISHEAFSGLLGVEDLTIERCNLTSISGQTLSYLRSLVTLRLRQLSIPTLEDQNFRKLANL
RGLEIDNWPYLEYISPLSFQGLDLYWLSITNSNITSVPSSSFRNLIHLTHLNLSYNPITT
LEPWAFRDLLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNDLQTLEEGSFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGNSLSTFTDSALFDHFTC
QKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRLITAKSNGRITVLPGGT
LEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDASSAFFANRSMYGGEFFNDTN
LNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTVETPFR
KAEGPAAVGGAGGARKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccccgggcaccagtgggcagtccctgtcgccatggcggtggctgagtctc
tgggggccggtcctgctgctggttaccatgacaaccctactgccaggttgttgccaggca
tgccctcctcggtgcgagtgctcagcccaaatccggtccgtcttgtgccagcggaggcgc
ctcaccggcatcccagagggcatccccacggaaactcgcctcctggacctcagccggaac
cggctccgctgggtggagatgggtgacctggcgccatatccgcaccttgaagaagtggac
ctgagtgagaacctcattgccacactggagcccaacgcgttcgccaacctgcagagcctc
cgggtgttacggctgagggcgaaccagttgaagcttgtacccatgggggccttcgccaag
ctggtcaacctgaccacgctggacctgagtgagaacaagctggtgattctgttggactac
accttccaggacctgaggagtctaagacacctggaggtgggagacaacgacctcgtctac
atctctcatgaggccttctctggcctgctaggggtggaggatctgaccattgaacgctgc
aacctgacttccatctctggccagacgctgtcctacctacgcagcctggtcactttgcga
ctacgccagctcagcatccccaccctggaggaccagaacttccgcaagctggccaacctg
cggggactggagatcgacaactggccctacctggaatacatctcccccctgagcttccag
ggtctggacctgtactggctgtccatcaccaacagcaacatcacctccgtcccctcgtcc
tccttcagaaacctgatccacctcacccatctcaacctgtcctacaacccgatcaccacc
ctggagccttgggccttcagggacctgctgaggctcaaagagctgatcatggtgaacacg
ggcctggctacagtggagccccactccctgggaggcctcagacagatccgggtcctcaac
ttctcctccaatgacctccagaccctggaggagggatcgttccactctgtcaacagcctg
gagacgctgcgggtggatgggaacccgctgctgtgtgactgccgtttgttgtggatcctg
cagagacgcaagaccctcaactttgacggcagggtgcctgtgtgcgctgggccggtggag
gtgcaggggaacagcctcagcaccttcaccgactcagcgctctttgatcacttcacctgc
cagaagcccaagatacgcaaccgcaagcttcaacaggtgacggctcgtgagggccagcca
gtgagtttcctctgcagtgccgtgggagagcctgcccctaacatcatgtggatctcccct
cagcgccgactaatcacagccaagagcaatggccgcatcaccgtcctcccaggagggacg
ttggagatccgctatgcccaggtcaccgacagtggcacctacatgtgcatcgccagcaat
gctgggggcaatgacacttacttcgcgatgctcacggtccggggtgcgccgctggatgcc
tcgtcggccttcttcgccaaccgctctatgtacggcggcgagttcttcaacgacacaaac
ctgaatagcactcgcgtcttcctcaagttcaccctggacctgaccaccatcctggtctcc
acagcgatgggctgcatcaccttcctgggcgtggtgctcttctgtttcctgttgttgttt
gcatggagccgggggcggggccagcgtaagaacaacttcaccgtcgagacccctttccgg
aaggctgaggggccggcggcggtgggtggcgccggaggggcccggaaattcaacatgaag
atgatatga
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