Salmo trutta (river trout): 115157414
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Entry
115157414 CDS
T08542
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
stru04120
Ubiquitin mediated proteolysis
stru04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115157414
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115157414
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115157414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115157414
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
115157414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_SCAP
ELYS-bb
Beta-prop_VPS8
Ge1_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
115157414
NCBI-ProteinID:
XP_029561500
Ensembl:
ENSSTUG00000041577
LinkDB
All DBs
Position
21:39729976..39741803
Genome browser
AA seq
495 aa
AA seq
DB search
MDQDYECRLLRQINIQNENASPLKAIDTVRALTPTNSPLSSPSKHGDRFIPSRAGANWSV
NFHRINENEKSHNQNRKTKDGTTDTSKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRSLPEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFKV
LDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWS
ERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRDI
RAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAAV
KAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVSTH
GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMRS
TKESVSVLNLFTRIR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggactatgagtgtcggctgctcaggcagatcaacatccagaacgagaacgcc
agccctttaaaggccatagatacagtacgagccctgacacccaccaactcccccctgtcg
tcaccaagcaaacatggcgaccgcttcatcccctcccgcgccggcgccaactggagcgtc
aacttccaccgcatcaacgagaatgagaagtctcacaatcagaacaggaagacaaaggat
ggcacaacagacactagcaaagcggacggcctggcgtactctgccctactgaagaacgag
ctgctgggggcaggcatagagaaggtccaggacccccagtcagaggaccgccgcctccag
ccctccacccccgccaagaggagcctcttcagttattctgtcagtgccaaacgatctcta
cccgaggatggcaacacagtgtctccatactccttgtctcctgttagcagcaacagtcag
aagctgttacggtcgcctaggaaacccacgcgtaagatctctaagatccccttcaaggtg
cttgatgctccggagctgcaggatgacttctacctcaacctggtggactggtcctccctc
aacgtcctcagtgtcggcctgggaacctgcgtctacctctggagcgcctgcactagccag
gtgacgcgtctgtgtgacttgtcagtggaaggggactctgtcacgtcagtgggctggtca
gagagggggaacttagtagcggtggggactcataagggctatgtacagatctgggacgca
gcagcagggaagaaactgtcagtactggagggacacacagccagagtgggtgcgttggcg
tggaatgccgaccagttgtcgtctggcagtcgtgacagggttatcctgcagagggacatc
cgagccccgcccctccagtcagaacgccgtctccagggacaccgacaggaagtttgcggc
ctcaagtggagcacagaccaccagctactggcctcagggggaaatgacaacaagctgctg
gtatggaaccactccagcgttctcccggtgcagcagtacacggagcatctggcagcagtg
aaggccatcgcctggtccccccatcagcatggcctgctggcgtctggagggggcactgcc
gaccgctgcatccgcttctggaacaccctgacaggccagcccctgcagtgcaccgacacg
ggctcccaggtctgcaacctggcctggtccaagcacaccaacgaactggtaagcacacac
ggctactcccagaaccagatcttggtgtggaagtacccctccctcacacaggtggccaaa
ctcacaggccactcctacagagtgctttacctggccatgtccccagacggagaggccatc
gtcacaggagccggagacgagacgctgcgcttctggaacgtcttcagcaagatgaggtcc
accaaggagtctgtatctgttctgaacctgttcaccaggatccggtag
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integrated database retrieval system