Salmo trutta (river trout): 115157440
Help
Entry
115157440 CDS
T08542
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115157440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115157440
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115157440
Complex C
U4/U6.U5 tri-SnRNP related factors
115157440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
115157440
NCBI-ProteinID:
XP_029561549
Ensembl:
ENSSTUG00000044134
LinkDB
All DBs
Position
21:40676391..40684874
Genome browser
AA seq
497 aa
AA seq
DB search
MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPVEPVPEEGRA
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGKDGDRRGGDR
ERERGERGEKERDRGGERERRRSRSRERKGERKDREKEREGGGENDRSRRKDRGSDRGRE
RSKDKRSKGETEDRRHKEERDERRGHREERKAKRSSRSGSRERRHKEKSKKREVQEESGS
KSRAEVGEKEKSRKRERSHERGEGEQRSHKRSRSKERSHRPREPSNGKDHGKHRERRRSQ
STERGERTTQSARAESP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtacgt
ggagtcgggactggcggcattgtgtccacagccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgatcactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacactcagcctcctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggtggctgcgtc
atgaccatcggtgagatggtccggtcgttcctcaccaagctggagtggttctccacactc
ttcccacgcatcccggtgcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggttccagagaaggtggaggagccggtagaacctgtgccagaggagggacgggcg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgagctggaaagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacaga
gagagggaaagaggagagaggggtgagaaagagagggacaggggaggagaaagggagagg
cgacggtctaggagcagggaacgcaagggagagcggaaagacagggagaaagaaagggag
ggcggcggggagaacgacaggagcaggaggaaagacaggggcagcgacagagggagggag
aggtccaaggacaagaggagcaagggagagactgaggacaggagacacaaagaagagcgg
gatgagaggagggggcacagggaggagaggaaggccaagcgctccagtcggagcggaagc
agggaaaggagacacaaggagaagtccaagaagagagaagtccaagaagagagcggaagc
aagagcagggccgaggtgggggagaaggagaagagcaggaagagagagcgcagccatgag
aggggggagggcgagcagcgctcacacaaacgcagccgcagcaaagagcggagccaccgg
ccacgagagcccagcaatgggaaagaccacgggaaacacagagagcgcaggaggagccag
agcacggagagaggagagaggacgacacagagtgctagggcagagtccccgtag
DBGET
integrated database retrieval system
