Salmo trutta (river trout): 115157592
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Entry
115157592 CDS
T08542
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115157592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115157592
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115157592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
115157592
NCBI-ProteinID:
XP_029561835
Ensembl:
ENSSTUG00000031522
LinkDB
All DBs
Position
21:complement(47729643..47821982)
Genome browser
AA seq
2331 aa
AA seq
DB search
MNTGSQIRLLLWKNWTLRKRQKIRFLVEILWPVVLFTGLVWLRKANPLYKQHECHFPNKA
MPSTGIIPWIQGIFCNANNPCFKHPTRAEGPGVVSNYNNCILARFWADSNELLFDDPEFQ
QLGRLWEDMAVMNNFMDTICNTPEQIAGRGLKIEDILKEDEMLTAFLLRDVGLSESVVHQ
LVNAQVRPEQFAHGVPDLHLKDIACSQALLERFIIFPSRRGMYGVRNAMCALTQQRLQKI
EDMLYANVDFFKIFRLLPRVLDNHTDGPDLRYWGRVLSAVSEKVQVLFERNSTKDLLNVV
YPLFQAGGPSSFSQLMSIVSALFCGYPDGEGSRVLSFNWYEDNNYKVFLGVNGSKNHDYV
YDMTTTPFCNDLMQTLESNPVTKIVWSSVKPLFMGKILYAPDSPAIRMILKSANTTFEEL
ERLMTMGKAWEEVGPQLWRFFNAGIQINMIRDTIRNPTVADLIDRSLEDTEFSSKDILNF
LFNGLEEDREETMPSFDWRNVFNLTDQAVRMFNQYGECISLDKFMPHTDEDQLTHQALFL
LEENKFWAGLVFLDVYPWSTTVPRHVKYKIRMDIDQVERTNKIKDRYWDPGPRADPMEDL
RYIWGGFAYLQDMVEHGILKIQTGHDWPLGVYVQQMPYPCYVDDLFMLTLNRCFPIFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVTNGVIWYTWFIDSFIMMSASTALLTLIIMA
GKVLNYSSPLVVFLFLLTFTMATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPHILCVA
WQDRITKNAKITASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDAYSFFTSIG
MMMFDAVLYGFLAWYLDNVFPGQYGIGRPFYFPFQPSYWQRSEPTLSNTPDSDPEKPDVD
KDVDSMCSPRRCNGVGVRKPCKHQDKRERMEREREEVLKRQEEEQNKEEQEEVLTGQLFF
EPEPAGLTVGVEIQDLVKVFPGGSRPAVDHLSIAFYEGQITSFLGHNGAGKTTTMSILTG
LFPPTSGTAFINGRDIRTDMDSIRTSMGMCPQYNILFKHLTVEEHILFYCMLKGTSQAEA
QQAVTVMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKIVILDEPTSGVDPYSRR
SIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGQLHCCGSPLFLKNCFGVGFYLT
LVRRMKDVRKKENECDCASECSCTCSTCTKVKEESQGQSQQLERALDGDVDNITTLIHHH
VPEAKLIEAIGQELTFLLPNKGFKHRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLK
VTADGEAAANPKTPEQWMLLKRTKSKVGVDEGEPEEANGLKQANGGGNHDDDSSAGKGSS
QVKGGNLVMKQFLALLVKRFHHATRSYKDFLAQIVLPASFVLIALIFTMIVPPFGEYPAL
TLTPWMYGKQLTFLSNERLENYQMRHFTKVLLNPPGLGTRCMAGNPLQNLPCENETLGWE
TPAVSSIASNILQSPEWHPLNPSPSCQCSTNKKLTMLPICPIGAGGLPPMQRKEATGDIL
LDLTDRNITDYLVKTYPSLIRQSLKSKYWVNEQRYGGLSVGGQLPILEVSPKQIQDTLSQ
LMKMLNVTGGPYTKLSLQEIGPFLRYMESEYNVKVWYNNKGWHAMVAFMNVANNAILRAH
LPRNVDPMQYGITAINHPLNLTKEQLSEVTVLKTSVDAVTAICVIFAMSFIPASFVLYLI
QERVTKAKHLQFVSGVSPLVYWLANFFWDMMNYSLSTAMVVGIFVAFDKKCYTSPTNLPA
LVLLLFLYGWSVTPMMYPMSYIFNIPSTAYVSLSCINLFIGINSSALTFILELFENNRAL
LEFNEWLKKGLLVFPHFCLGRGLIDMAMNQAVTDVYAHFGEDRALDPFKWDFVGKNLVFM
AIEGCVYFLFTILIEYRFFLDHWLSDFRGPPPKDEDEDVAVERERIYNGGNKSDILQIRD
LCKTYSGKTRQAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEATVAGYS
ILSDMLDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPESDISRVADWGIQKLGLSE
YAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWTAIMSVIQDGRA
VVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMKVKAAKAGVSPEL
GPAESFMESSFPGCVQREKHYNTLQYEIASSSLARIFQLVVANKDKLNIEDYSVSQTTLD
QVFVNFAKQQAGEDEDVLQPRAVNARNEKQNVPTKRKVSPIKIKTRRQTKI
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggaagtcagatacgcctgctgttgtggaagaactggactctacgcaagaga
cagaagatccgcttcctggtggagattctgtggccggtggttctgttcactggtctggtg
tggttgaggaaagccaaccctctttacaaacagcatgaatgtcacttccccaacaaggcc
atgccttccacaggtatcatcccgtggatccagggtatcttctgtaacgccaacaacccc
tgcttcaaacaccctaccagggcagagggccctggggtggtctccaactacaacaactgc
atactggcgcggttctgggctgactccaatgagctgttgtttgacgacccagagttccag
cagttgggtcgactgtgggaggacatggccgtcatgaacaacttcatggacaccatctgt
aacacaccagaacagatagcaggtcggggtctgaagatagaggatatcctgaaggaagat
gagatgttgacagccttcctactaagagacgttggcctgtcagagtctgtggttcatcag
ctggtcaacgctcaagtccgcccagaacagtttgcccacggtgttccagacctccacttg
aaggacatcgcctgcagccaggctcttctagagaggtttatcatctttcccagtcggaga
ggcatgtacggagtgcgtaacgctatgtgtgccctgacacagcagcgcctgcagaagata
gaggacatgctctatgctaacgttgacttcttcaagatcttcagattgctgccccgggtg
ttggacaaccacacggacggaccagacctacgctactgggggcgggtcctaagcgctgta
tcagagaaggtccaagtgctctttgagaggaacagcaccaaggaccttctgaatgtagtc
tacccgttgttccaggctggtggtcccagctcctttagccagctgatgagcattgtgtcg
gccctgttctgtgggtacccagacggagagggatccagggtcctctccttcaactggtac
gaagacaacaactacaaggtgttcctgggggtgaatggatccaagaaccatgactatgtc
tacgacatgacaaccactccgttctgtaacgacctgatgcagactctggagtctaacccg
gtcactaagatcgtgtggagttcagtcaagcctctcttcatggggaagatcctctatgct
ccagactccccagccatcagaatgatactaaagagtgccaacactacgtttgaggagctg
gagcgtctgatgaccatgggaaaggcctgggaggaggtgggacctcaactctggaggttc
ttcaatgctggaatccagataaacatgatcagggacaccatcagaaaccccacggtagca
gacctaatagacaggagtctggaggacactgagttctcctctaaagacatcctcaacttc
ctgttcaacgggcttgaggaggacagagaagagaccatgcccagcttcgactggaggaac
gtcttcaacctcacagaccaggccgtacgcatgttcaaccagtacggagagtgtatcagt
ttggataagttcatgccccatacagacgaggatcagctgacccaccaggctctctttcta
ttggaggagaataagttctgggcagggctagtcttcctggatgtctacccctggagcact
actgtaccgcgtcacgtcaagtacaagatacgcatggacatcgaccaagtagagagaacc
aacaagatcaaagataggtattgggaccctggtcccagagcagaccctatggaggacctg
aggtatatctggggtggctttgcctatctacaggacatggtagagcatggcatactgaag
atacagacgggacatgactggcccctgggagtctacgtacaacagatgccatacccctgc
tatgtagacgacctcttcatgttgactctgaaccggtgcttccctatcttcatggtgcta
gcgtggatctactctgtgtctatgactgtgaagagcatcgttctggagaaggagctacgc
ctcaaagagacactcaaggccatgggagtgaccaacggagtgatctggtacacctggttt
atagacagcttcatcatgatgagcgccagcactgccctgctcacactgattattatggct
ggtaaagtgttgaactactccagcccgctggtggtgttcctgttcctcctgaccttcacc
atggccaccattatgcagtgtttccttctcagtgtgttcttcaacaaggccaacctggct
gcagcctgcagcggtatcatttacttcaccctctacctcccccacatcctctgtgtggcc
tggcaggaccgcatcaccaagaacgccaagatcacagcgagtctgctgtccccagtagcg
tttggttttgggacggagtacctgtctcgttatgaggagcagggcctgggtctgcagtgg
gacaacatcggcaccagtccactagagggtgatgcctactccttcttcacctccatcggc
atgatgatgtttgacgccgtgctgtatggcttcctggcatggtaccttgacaacgtcttc
ccaggtcagtatgggattggacgaccattctacttcccattccagccctcctattggcaa
aggtctgaacccaccctctccaacactccagactcagatccagagaagcccgacgtggac
aaggacgtagacagtatgtgttctcctaggaggtgtaacggcgtgggggtaaggaaaccc
tgcaaacaccaggacaagagagagaggatggagagagagagggaggaggtgctcaaacga
caggaagaagaacagaacaaggaggaacaggaagaagttctgacaggccagttgttcttt
gagccagagccagcagggctgaccgtgggggtagagattcaggacttggtcaaggtgttt
cctgggggatcccgtccggccgtggaccacctcagcatcgccttctacgagggccagatc
acatcattcctaggacacaacggagccgggaaaaccaccaccatgtctatcctgactggt
ctgttccctcctacatctgggacagcctttatcaacgggagagacatcaggactgacatg
gacagtatccgcacatccatgggcatgtgtccccagtacaatatcctcttcaaacatctg
acggtggaggaacacatcctgttctactgcatgctgaagggcacctctcaggctgaggct
caacaggcggtcacggtcatgctggaggatctgggcctgcctcataagagagacgaggag
gcacagaacctctcaggaggtatgcagaggaagctgtctgttgccatggcgtttgttggg
gggtcaaagattgtgatcctggatgagcccacgtcgggggtcgacccttactccagacga
tccatctgggacctgctactcaaataccgcacaggccgtacagtgatcctgtccactcac
cacatggacgaggctgacctgttgagtgaccgtgtagccatcatctctaagggccagctc
cattgctgtggctcccccctcttcctcaagaactgcttcggagtgggattctacctcacc
ctggtccgacgcatgaaggacgtcaggaaaaaagagaatgagtgtgactgtgcctcagag
tgttcctgtacttgttccacctgcaccaaggtgaaagaggaatcccagggccagtcccag
cagctggagagagctctggatggtgacgtggacaacatcaccacgctgatccatcaccac
gtcccagaagccaagctgatcgaggccattggccaggagctgaccttcctgctgcccaac
aaggggttcaagcaccgggcctacgcctccctcttcagagaactggaggaaacactggga
gacatgggcctcagcagcttcggcatctctgacacctcactggaggagatctttctgaag
gtgacagcagatggggaagcagcagccaatcccaaaactccagaacagtggatgttgctg
aagagaaccaaaagtaaagttggtgtggacgagggtgaacctgaagaggctaacggtttg
aagcaggccaacggtgggggtaaccatgacgacgacagcagcgctgggaaagggtcgagt
caggtcaaaggaggcaatctggtcatgaagcagtttctggccctgctggtcaagaggttt
caccacgctaccagatcatacaaagacttcctcgcacagatcgtcctgcctgctagcttc
gtcctgatagccctgatcttcaccatgattgtgcctccgtttggagagtaccccgccctc
accctcactccctggatgtatggaaagcagctaactttcttgagtaacgagcgactggaa
aactaccagatgagacatttcaccaaggtgttgctgaacccccctggccttgggactcgc
tgtatggcaggaaaccctctacaaaacctgccctgtgagaacgagacattgggctgggag
acacctgcggtttcttcaatagccagtaacatcctgcagagccctgagtggcacccgcta
aacccctccccttcctgccagtgcagcaccaataagaagctaactatgttacccatctgt
ccaatcggagctggggggctgccccctatgcagaggaaagaagctacaggagatatacta
ctggacctgactgacagaaacattacagactacctggttaaaacctaccccagcctcatc
agacaaagtttgaagagcaaatactgggtgaatgaacaaaggtatggaggcctgtctgtt
ggaggtcagctgcccatactggaagtcagccctaaacagatacaagataccctctctcaa
ctgatgaagatgctcaacgtcactgggggtccctacacaaagctatcgctgcaggagatt
ggacctttcctcagatacatggaaagtgaatacaatgtcaaagtctggtacaacaacaaa
ggctggcacgccatggtggccttcatgaatgtggccaacaacgccattctgagggcccac
ctgcctcgtaacgttgaccccatgcagtacggcatcacagccatcaaccaccccctcaac
ctcaccaaggaacagctgtctgaagtcactgtgttgaagacatcagtagacgcggtgaca
gctatctgtgtgatctttgccatgtccttcatcccagcctcgtttgtcctctacctcatc
caggagagagtaaccaaggctaaacacctccagttcgtcagcggggtcagcccccttgtc
tactggttagccaacttcttctgggatatgatgaactactctctcagtacagccatggtg
gtggggatctttgtggccttcgacaagaagtgttacacctcacccaccaacctgccagcc
ctggttctcctgctcttcctgtatgggtggtcagtaacccccatgatgtaccccatgtca
tacatctttaacatccccagtacagcctacgtctctctgtcctgcatcaacctgttcatc
ggcatcaacagcagcgccctgaccttcatattggaactgttcgagaacaaccgggccttg
ttagagttcaatgagtggctgaagaaaggcctcctggtgttccctcacttctgtctgggc
cgggggctgattgacatggctatgaaccaggcggtgactgatgtctatgcacactttggt
gaggaccgtgccttggatccgttcaaatgggactttgtagggaagaacctggtcttcatg
gctatagagggatgtgtctatttcctcttcactatcctcatagagtaccgcttcttcctc
gaccactggttatcagacttccgagggccccctcctaaagatgaggatgaggacgtggcg
gtggagagagagaggatctataacggagggaacaagagtgacatcctacagatcagagac
ctctgcaagacgtactctgggaagacgagacaagcggtggacaggatctgtgtgggcgtg
cctgcaggagagtgttttggtctgttaggagtgaacggagcagggaagaccaccactttc
aagatgttgactggagacacagatgttagttctggagaggccactgtcgctggatacagt
atcctgtcagacatgttggacgtgcaccagaacatgggctactgccctcagtttgatgct
atagacgacctgctgacaggcagggaacatctgtacctctacgctcgcctccgaggggtc
cctgagtcagacatcagcagagtggcagattggggcatccagaagcttggcctatcagag
tacgctggtcgctgtgcaggaacatacagcggaggcaacaagaggaaactctccacagcc
atcgctatgattggctgcccagccctggttctactggatgaacccactacaggtatggac
ccccactcccgacggttcctgtggactgccattatgagcgtcatccaggacgggagggct
gtggttttgacatcacacagcatggaggagtgtgaagctctgtgcactcgtttggccatc
atggtcaacggcaccttcaaatgtctggggaccatacagcacctcaaatacaagtttggt
gatggctatgtggtgaccatgaaggtaaaggcagctaaagcaggcgtatctccagagctg
ggtccagcggagagcttcatggagagcagcttcccggggtgtgtccagagagagaaacac
tacaacactctgcagtatgagatcgcctcctcttccctggctaggatcttccagctagtg
gtcgccaacaaggacaaactcaatatagaggactactctgtatcacagactacactagat
caggtgtttgtgaactttgctaagcaacaggcaggagaggacgaggacgttttacaaccc
cgagcggtcaacgcgcgcaatgaaaaacaaaatgtccccacgaaacgcaaggtctccccc
atcaagataaaaaccagaagacaaactaaaatttga
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integrated database retrieval system
