Salmo trutta (river trout): 115157594
Help
Entry
115157594 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 29-like
KO
K20644
Rho GTPase-activating protein 29
Organism
stru
Salmo trutta (river trout)
Pathway
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115157594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115157594
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115157594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
115157594
NCBI-ProteinID:
XP_029561839
LinkDB
All DBs
Position
21:complement(47828302..47907287)
Genome browser
AA seq
1815 aa
AA seq
DB search
MIRKSSSGTGGGGGGGGNNTKHQQNKQHRSSFTTQGPSRLSNMGRSSRTTNPLGSIGLGS
NSLDLGSTVVGAPGVDPDYVMQLVNDVRRFSDTLLSLKEAFHSEESHEGLPQGVQERLVS
SRPESHEGLPQRVQERLVSSRPESHEGLPQRVQERLVSSLPESHEGLPQRVQERLVSSLP
ESHEGLPQRVQERLRELLRVLKSVIGKHQTLNSVDILRAAGTVIAKVKGINFKEVNQENK
KAIFGDIYTSIDSLAFTFGNVVSDFLMGDVDSQSGLGIPQTRRSRSFDNLSVDSGGYVSE
KKGLVGPKVALSKEEEVDVILQKNNSGVESVLLYAKAWSKYTKDLLAWVDKRLGLDIECA
KSYAKMAESAKTLASQQDYMPFRDIYISTFKNDIEYSQLLLQTATALQTNKFIQPLLSRK
TELDKLRKDIKEQWQREQKKMQESEVALRKARWTQAQRRDEYHKAQSSASRSQEEQSKQL
DKKRKLEEEALQKAEDARDQYRACVTDAGARRAELASTKTDILTQIRELVTQCDLTLKAV
TVNWFQLQQAQTSSLPVHYQALCGNAKMYEPGQRYAEFVRNLPKDQIHMESSSIDERFPV
FNKHSTGSTSSHSNLSQVSLISGDVLSGDEVDSPLGSRPGKRSNSATDIQGLRGGQGPLR
AWASGIQDRGMCSDSESAGGSSESQSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDERQ
PPSPSDNGLGEMVTETASSPGPFRNAQMSKASQTHKLRKLRAPSKCRECDSLVVFHGAEC
EECSLACHKKCLETLAIQCGHKKLQGRLHLFGIEFAQAAKNSPDGIPFIIRKCTSEIENR
ALNLKGIYRVNGAKSRVEKLCQAFENGKDLVELSDLSPHDIANVLKLYLRQLPEPLILYR
YYNDFIGLAKESQRVIIEEKAAARALQTQNQEWPGGDQPRPGGIQPWVEGEQLPLTTSQP
GGGELPKQPSIKLNRVIFKIRDLLRQLPPAHYRTLRFLTAHLHRVTEQAEENKMTASNLG
IIFGPTLVKPRQTDAEVSLSSLVDYPYQALMVELLVRHFQVIFDLSSPSSSSSSPITTST
VGQTSSSPITTSTVGQTSPSPPTTTSTVCQTSPRLTPQEKEQRLSRHSTSLLDIKESAKV
YKRHSSVIQSSQTLDDVREVKTDGTGPNRTGPDRTGPDGTGPDRRELTAGSSSSAPGAAS
VQRSTLLFGRPSLNLSSSTAPKVQLRPQRARILSRPISMPLERLPLPTPSQVVDRNSRND
NAAIMLDPTTNTIVLDPTTNTIVESAEPEKQKETEKPRIGGGSRLSTYYIDTQQAVQRRP
WDRKYKHYDVTPRTAMIMANLPPAGTSPGPKPEKQLTMPTQPAVSGPTSSTLPSNSSFST
IFPNNPYTVSLKAGQTSRRDREETKDRPNSAAEGGGETRTSTNSPMKFRQPRILQPPPGT
FYKPSGYSGARGWPPLSSSGTTSLTKMSPTSPTVKTSSSTSPTVKTSSSASPTVKTSSST
SPIVKSSSSTSPIVKSSSSTSPTVKTSSSTSPTVKSSSSTSPTVKTSSPTSPAVKSSSST
SPTVKTSSPTSPAVKTSSPTSPTVKTSSSTSPTVKTSSSTSPTVKTSSPTSPTVKSSSST
SPTVKTSSSTSPTVKSSSPTSPTVKSSSLTSPTVKSSSSTSPTVKTSSSTSPTVKTSSST
SPTVKTFSPTSPTVKTFHTSTTVTAPLLLSSSHSSSITFSSSPMVTTTTPSPTTTYILQT
SNLSTHTLQDSVDSSVSVDPEVTTSADLSPRQSPPPSSPEDTSPTEVIPLQQRLRRRPRP
SACLQELEHREAHFV
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaagagcagcagtggtactggaggaggaggaggaggaggagggaataataca
aaacaccaacagaacaaacagcatcgctccagcttcaccacccagggcccgtctcgcctc
tccaacatgggccggagctccaggaccaccaaccctctggggagtatagggcttggctcc
aacagtttggatctggggtccaccgtggtaggagcgcctggggtagatccggactatgtg
atgcagttggtgaatgacgtacggaggttttccgatacgctgctcagccttaaagaagcc
ttccattctgaagaaagccacgagggactccctcagggggtacaggagcggttggtctcc
tctcgtccagaaagccacgagggactccctcagcgggtacaggagcggttggtctcctct
cgtccagaaagccacgagggactccctcagcgggtacaggagcggttggtctcctctctt
ccagaaagccacgagggactccctcagcgggtacaggagcggttggtctcctctcttcca
gaaagccatgagggactccctcagcgggtacaggagcggttgagggagctgctccgtgtt
ctcaagtctgtcatcggcaaacaccagaccctcaactctgtagacatcctcagggctgcc
ggcaccgtcatcgctaaggtcaaaggcattaacttcaaggaagtgaaccaagaaaacaaa
aaggctatatttggcgacatatacacgtccattgacagtttggcattcacatttggcaat
gtagtgtctgacttccttatgggagatgtggacagccaatcagggttggggatcccccag
accaggagaagcaggtcttttgacaacctctctgtggattctggggggtatgtttcagag
aagaaaggccttgtgggcccaaaggtggcgctgtctaaagaggaggaggttgacgtgatc
ctgcagaagaacaacagtggggtggagtcagttttgctctatgccaaggcctggtccaag
tacaccaaggatctgctggcttgggtcgacaaacgcctgggactggacattgaatgtgcc
aaaagttatgccaaaatggccgaatctgcaaagacgctcgcgagtcaacaggactatatg
ccgttcagagatatctatatctctacgtttaagaatgacatcgagtacagccaactcctc
ctgcagactgccactgccctgcagaccaacaaattcatacagccgctgttgtccagaaag
actgagctggacaaactgaggaaagacatcaaggagcagtggcagagagaacagaagaaa
atgcaagagtccgaggtggctctgcgtaaggcccggtggacccaggcccagaggagagac
gagtaccacaaggcccaatcctcagccagccgctcccaggaggaacagtccaaacagctg
gacaagaagaggaaactggaagaggaggctctacagaaggctgaggatgcccgggaccag
tacagagcgtgtgtaactgatgcaggtgccaggagggcagagctcgccagcaccaagaca
gacatcctcactcagatcagagaactggtgacccagtgtgacctcacactcaaagctgtg
acagtcaactggttccagctgcagcaggcccagacctcgtctctccccgtccactaccag
gccctgtgtgggaacgctaagatgtacgagccaggacagagatacgctgagtttgtccgt
aatttgcccaaagatcagatacacatggagtcctcctccattgatgaacggtttcctgtg
ttcaacaagcattcaacgggcagcaccagttcccatagtaacctgtcccaggtgtccctc
atctccggtgacgtcctgagtggggacgaggtggatagtcctctggggtcacgtcctggg
aagaggtccaacagcgccacggacatacaaggtctgagagggggacagggcccgttgaga
gcctgggcatcaggtatccaggacagggggatgtgtagtgactcagagagtgctggaggc
agcagtgagtcccaatccatggactcacccacagctagcccaggtgactttaaacgcaga
ctacccagaaccccctccactggcactatgtcctcggcagacgacctcgatgagagacaa
ccaccttcaccctcagacaatggtctgggtgagatggtgacagagacagccagttcccca
ggtccgtttcgtaacgcccagatgtccaaggcgtctcagacacacaagctgaggaaactc
agagctccatctaagtgcagggagtgtgacagtctggtggtgttccacggagcagaatgt
gaagagtgttccctggcatgtcataagaagtgtctggagactctggccatccagtgtggt
cataagaagctgcagggaagattacatctgtttgggatagaatttgcccaggcagctaag
aacagcccagacgggatccccttcatcatcaggaagtgtacctctgagatagagaacaga
gcactcaacctcaagggaatctaccgtgtgaacggggctaagtctcgtgtggagaagcta
tgtcaggcgtttgagaacggcaaagacctggttgagctctctgacctctcaccccacgac
atcgccaacgtgctcaaactctacctgagacagttaccagagccgctgatcctgtaccgt
tactataatgacttcattggattggccaaggagagccagagggtaatcatagaggagaag
gctgcagccagggccctccagacccagaaccaggagtggccagggggagatcaaccccga
ccaggaggaatccagccttgggtagaaggagagcagcttcccctgacaaccagccaacct
ggaggaggagagctgcccaaacagcccagtatcaaactcaacagagtcatctttaagatt
agagacctgttacgacagcttcctcctgcacactacaggaccctccgctttctcacggca
cacctacatagggtgacggagcaggcagaggagaacaagatgacagccagtaatctgggc
attatctttggccctacgctggtcaaaccccgacagactgacgcagaggtctccctgtct
tctctggttgactacccctaccaggctctgatggtggagctgctggtacgtcacttccaa
gtgatctttgacttgtccagcccctcctcctcctcctcctcccccatcaccacctccacg
gtgggccagacctcctcctcccccatcaccacctccacggtgggccagacctccccctcc
ccccccaccaccacctccacggtttgccagacctccccccgactcacccctcaggagaag
gagcagagactcagccgccactccacctccctgctcgacatcaaggagagtgccaaagtc
tacaagaggcactcgtcagtcatccagtcctctcaaaccctggatgacgtgagagaggtg
aagacagacgggacaggaccaaacaggacaggaccagacaggacaggaccagacgggaca
ggaccagacaggagagagttaacagccggctcctcctcctctgctcctggcgctgcctcg
gtccagagatctaccctgttgtttggccgtcccagcctcaacctctcctcctctacggcc
ccgaaggtccagctccggccccagcgcgctagaatcctgtctcgaccaatcagcatgccc
ctggagcgcttgcccctccccaccccctcacaggtggtcgacagaaacagccgtaacgac
aacgctgccatcatgttggatcccaccactaacaccatcgtgttggatcccaccactaac
accatcgtggagtcagccgagccggagaagcagaaggagacggagaagcctcggattggt
ggggggtcaaggctcagtacctattacatcgacacccagcaggccgtgcagcggaggccc
tgggacaggaagtacaaacactacgacgtcacgccacgcaccgccatgatcatggctaac
ttaccgccggccggtactagccccggcccaaaaccggagaaacagctgacgatgccgaca
caaccggccgtatctgggccaaccagctctactctcccatccaatagtagtttcagcact
atattccccaacaacccatacacagtgtcgttgaaggctggccagacgtccagaagagac
agagaggagaccaaggataggcctaactctgctgctgaagggggtggggagacaagaaca
tctaccaactcccccatgaagttcagacagccaaggattctgcagcctccacccggaacc
ttctacaagccttctggttattcaggtgccagaggctggccaccattaagttcctctggg
accactagcctcaccaaaatgtccccgacttctcctactgttaaaacctcttcctcgact
tctcctactgttaaaacctcttcctcggcttctcctactgttaaaacctcttcctcgact
tctcctattgttaaatcctcttcctcgacttctcctattgttaaatcctcttcctcgact
tctcctactgttaaaacctcttcctcgacttctcctactgttaaatcctcttcctcgact
tctcctactgttaaaacctcttccccgacttctcctgcagttaaatcttcttcctcgact
tctcctactgttaaaacctcttccccgacttctcctgctgttaaaacctcttccccgact
tctcctactgttaaaacctcttcctcgacttctcctactgttaaaacctcttcctcgact
tctcctactgttaaaacctcttccccgacttctcctactgttaaatcctcttcctcgact
tctcctactgttaaaacctcttcctcgacttctcctactgttaaatcctcttccccgact
tctcctactgttaaatcctcttccctgacttctcctactgttaaatcctcttcctcgact
tctcctactgttaaaacctcttcctcgacttctcctactgttaaaacctcttcctcgact
tctcctactgttaaaaccttttccccgacttctcctactgttaaaaccttccacacctcc
actactgttactgctcctctcctcctctcttcctcccattcctccagcattactttctcc
tcttctcctatggttaccaccaccaccccatcccctactaccacctacatccttcaaacc
tcaaacctctccacacacaccctacaggactccgtggacagctctgttagtgttgaccct
gaggtcacaacctccgctgacctttccccgcgccagtcccctccccccagcagcccagag
gacactagcccgactgaggtcatcccgctgcaacaaagactgagacgccggcccagaccc
agcgcttgcctgcaggagctagaacacagagaggcccactttgtctaa
DBGET
integrated database retrieval system
