Salmo trutta (river trout): 115157634
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Entry
115157634 CDS
T08542
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115157634 (fubp1)
03041 Spliceosome [BR:
stru03041
]
115157634 (fubp1)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115157634 (fubp1)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115157634 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
115157634
NCBI-ProteinID:
XP_029561917
LinkDB
All DBs
Position
21:50171036..50200744
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AA seq
698 aa
AA seq
DB search
MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPSAPSGNEFGYGGQKRPLED
GDDCWTSLNSRTHREGMNSPFSDQPETKKVAPNDPFSAAMGMGGMGGGGPRSSSEEFKVP
DGMVGFIIGRGGEQISRMQQESGCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLTEIV
DKGRPTPAFHHNDAGGPGMSVQEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGP
QNTGADKPLRISGEPFKVQQAKDMVMELIREQGFREQRGEYGSRMGGGGGGGGGGGGGGE
GLDVPVPRFAVGIVIGRNGEMIKKIQSDTGVRIQFKPDDGSTPERIAQIVGPPEQSQHAA
EIISDLLRSVQQGGPGGPNGGGRGRGRGGNGGGNWNMGPPGGLQEFTFTVPTMKTGLIIG
KGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSHQQIDYARQLVEEKIGGPVSP
MGGPQGPPGPHGGPSPHGPPGPPGHPAQMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGF
PHWQQGQPDPGKAAADANAAAWAAYYSQYQQQPQAPMTPTGGAPGTTQANGQGDPKGPGH
TGQADYSKAWEEYYKKMGQQSQQPQDYTKAWEEYYKKQGQAAPQAAAAPAGQPAGQPAGQ
PDYSAAWAEYYRQQAAYYGQGSPQAMGAQPQAPQVHPQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccgactactcgaacgttgctccgccgtcgggaaatggcgccggaatgaacgacgct
tttaaagacgcacttcagcgagctagacagatcgccgctaagattggtggtgacggcgta
ccctcggcgccctcgggtaatgagtttggctacggaggccagaagcggcccctagaagat
ggcgatgactgttggaccagtctaaacagtagaacccatcgggaagggatgaactctcct
ttctcagaccaaccagagaccaagaaggtggcaccaaatgacccgttctcagcagcgatg
ggtatgggaggaatgggaggtggtggaccgcgatcgtcatcagaggagttcaaggttcct
gacgggatggttggattcattattggaagaggaggagaacagatatcccgcatgcagcaa
gagtctggatgcaaaatccagattgcccccgacagtggaggcatgcctgataggtcagtc
acactgacaggatccccagactcaatacaagctgccaagaggctgctgacggagatcgtt
gataagggtcgtcctactccagcctttcaccacaacgacgccggcggccccggtatgtct
gttcaggagatgctggtccctgcctccaaggctggcctggtcatcgggaagggaggagag
actatcaaacagctgcaggagagagccggggtcaagatggtgatgatccaggaaggacct
caaaacactggagcagacaaacctctacgcatctctggggaaccttttaaagtccagcaa
gccaaagacatggtgatggagctgatcagagaacagggcttcagggagcagagaggcgag
tacggctccaggatggggggaggaggaggcggtggcggcggaggaggaggaggaggtgag
ggcctggatgttcctgtccccaggtttgcggtaggaatcgtgatcgggagaaacggagag
atgatcaagaagatccagagcgacacaggagtcaggatccagttcaaaccagatgacggc
agtaccccggagaggatagcccagatcgtgggtcctcctgaacagtcccagcatgcagca
gagataatctctgaccttctgaggagtgttcagcagggagggcctggcggtcctaacgga
gggggcagggggagaggcagggggggtaacgggggtggtaactggaacatgggtcctcct
ggtggactgcaggagttcaccttcaccgtccctaccatgaagactggactcatcatcggc
aaaggaggagagaccatcaagggcatcagccagcagtctggggctcgtattgagctccag
agaaaccctccacccaactccgaccccaacattaagatgttcaccgtccgaggatcacac
caacagatcgactacgcacggcagctggtcgaggagaagatcgggggtccagtcagtcca
atgggtggtccccaaggtcctccagggccacacggagggccgtctccccacggccccccc
ggccctcctgggcaccctgctcagatgggtccctacaaccccggcccctacaaccaggga
cccccaggaccacatggtcctcccgctccctaccagcctcagggttggggtaacggcttc
ccccactggcagcaaggacagccggatcctggtaaagctgcagctgatgccaacgcagcg
gcttgggcagcgtattactcccagtaccagcagcaaccccaggcccccatgacacccaca
ggcggtgcccctggcaccacacaggccaacgggcaaggtgaccccaagggacctggtcat
actgggcaggctgattactccaaggcctgggaggaatattacaagaaaatggggcagcaa
agtcagcaaccacaggactacaccaaggcctgggaggagtactacaagaaacaaggtcaa
gcggcccctcaggcggcagcagcaccagccggtcagccagccggtcagccagccggtcag
ccggactatagtgctgcctgggcagagtactaccgtcaacaggctgcttactacggacag
ggcagcccacaggccatgggggcacagccacaagcacctcaggtacacccccagtaa
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integrated database retrieval system
