KEGG   Salmo trutta (river trout): 115157635
Entry
115157635         CDS       T08542                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:stru03036]
    115157635
   03400 DNA repair and recombination proteins [BR:stru03400]
    115157635
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115157635
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115157635
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N Sec7-like_HUS Tipalpha HEAT_EZ
Other DBs
NCBI-GeneID: 115157635
NCBI-ProteinID: XP_029561923
Ensembl: ENSSTUG00000026387
UniProt: A0A674AQN9
LinkDB
Position
2:complement(55091783..55109711)
AA seq 1026 aa
MAAGSALLVGLVEEFVSGQQDSKAADTATGLKAGQFTILQLVEALGLHLASSQPQTRARG
VQLLSNVLQQCHGDLTEREVEVLLVFYENRLKDHYVITPHVLKGLKALTKCSVLPPGSAV
SILKSLFQDVHVQSLMLVERSCVYNILTQLMESRESELKGLGADFVFGFVQSVDGERDPR
NLLLAFQIARKIIHGGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITQEELILALRAV
LTGTPRFAEFLLPLIIEKLDSDVQSAKVDSLQTLTACASVYEHKELAEFLPGLWASLRRE
VFQTASERVESAGLAALGALTACISRSVLNSDSEDYLNVFLDLVLKDCQHHLCEPDLKLV
WPSAKLLQATSTASYRASHRVAAAIMPSLIEQYNSRTQCAQRRTLLEMLQGFVQPVKSSE
EDESVLLDFRQSLCSIVFSALSEDSAGLQITSLRVLTALSQQTVLLLKSDVELAVDHLTR
LILEEEDAKVSLAVVECAGALACLHPLAFISKMVPRLKEEIFSESMAQGDSAPLSQEHPQ
QAVRQRCLTALAAVSSRPSVVQESTPVLLQVLTSSHTGTGSFSLEEVISVCHNLQRIAEH
AQDTEETGRVFHDIVIPRLLGLALQAAMQGSSDHQSPLVEESVLSAMVPVISTTCARLQS
QLAGQTASRAVSLFLDGDMSFLPENAFPSKIQLLKKQAGDSWSQSQMVCLLMGCVCSLPR
SVEVPQLDRLLLELEELSCTCDHPLSYTSAAKCYAGLVNKRPAGEALDSLIDRMLKRIST
ELDCSSSSVRTQAFTLLLWVAKALLLRYHPLSTALTDKLFSLLSDSELGLLAADGFSLLM
SDSPDVLNRGCNADVRIMYRQRFFTENSAKLVLGFNSAAQERKSGYLKALSHIVNNLPRQ
VQLTELPALLPLLLEALSCPDQAVQLSTLSCLQPVLMDPPSALITQLEALVGRTLTLTTS
PAMKVRIASLRCIHALSRFPEHEIMPFRARVLRALAVPLDDLKRMVRSEAVVARNEWFLL
GSPGGR
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggctgcgggtagtgccttgctagtgggcttggtagaagaattcgtttcgggacaacag
gacagcaaggccgcagacaccgcaacaggactcaaggctggacagtttacaatactacag
ttggttgaagcgttgggcttgcatctggccagctcccaaccccagacacgagcccgcggt
gtccagctcctctccaatgtcctacagcagtgccatggagaccttacagagagagaagtg
gaagtccttctagtgttttatgagaacagactcaaggaccactatgtcatcacaccacat
gtcttgaaggggttgaaagcgttgacaaaatgctcagtgttgccgcctgggtctgcagtg
tccattctgaaatcactcttccaggacgttcatgtgcagtccctgatgctggtggagcgg
tcatgtgtttacaacatcctaacccagcttatggaatccagagagtcagagctgaagggc
ctgggtgcagactttgtttttggttttgtccagtcagtggatggggagcgggacccacgc
aatcttctcctggccttccagatcgctaggaaaatcatccatggaggctatgatctgggt
aaattcacagaggagctgtttgaagttacatcctgctatttccccatagacttcagcccg
ccacccaatgacccccacggcatcacccaggaagagctgatcctcgccctgagggccgtg
ctcactggaacaccacgctttgcagagttcctgctgccgctgatcattgagaagctggac
tcagatgttcagagtgccaaggtggactccctgcagaccctgactgcctgtgcttctgtg
tatgaacataaagagctagccgaattcctaccaggcctttgggcctcgctgcgcagggag
gtgttccagacagccagtgagagggtggagtccgctggtctagctgccctcggtgccctg
acagcctgcatctcccgctccgtcctcaactctgactctgaagactacctcaatgtcttc
ctcgacttggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctggtg
tggcccagcgccaagctgctgcaggccacctctaccgcctcctacagggcgagccacaga
gttgcagccgccatcatgccgtccctcatagaacaatacaacagccgaacacaatgtgct
cagcggcgcaccctactggagatgttacagggcttcgtccagccagtgaagtcttcagag
gaggatgaaagtgtgctgttggacttcaggcagtctctttgcagtatagtgttctctgct
ctgtctgaggacagtgctgggctccagatcacatcactgcgtgtgctcactgccctgagc
caacagacagtcctgctgttaaagtcagatgtggagctggccgttgaccacctcaccagg
ctcatcctggaggaggaagatgctaaagtcagcctggctgtggttgagtgtgcaggggct
ctggcttgtctgcaccctctagccttcatctctaagatggttccacggctgaaggaggag
atcttctcagagtccatggcacaaggtgacagcgccccgctgtcccaggaacatccccag
caggccgtgcgtcagcggtgtttgacggcgctggctgcggtgtcgtcccggcccagtgtg
gttcaggagagcacacctgtcctgctacaggttctcacctcctcacacactggcactggc
tcattttcattggaggaggtgatctctgtgtgccacaatctgcagaggatagcagagcat
gcccaggacacagaagagaccggccgcgtcttccatgacatcgtcattccgcgcctgctc
ggactggccttgcaggcagctatgcaggggtcctcagaccatcagagtcctttagtggag
gagtctgtcctatcagccatggtaccagtcatcagcaccacctgtgcccgactacagtcc
caactggcgggtcaaacagcttcgcgggcggtgtccctcttcctggacggtgacatgtcc
ttcctgccagagaatgccttcccctccaagatccagctcctcaagaagcaggcaggtgac
tcctggagccagtcccagatggtgtgtcttctcatgggctgtgtgtgctcgctgcctcgg
agcgtggaggttccacagctggataggctactgttagaactggaggagctgagctgtacc
tgtgaccatcccctctcctacacctcagctgccaagtgctacgctgggctggtcaacaag
aggcctgcaggagaagccctggactctctgatagacaggatgttaaagaggatctccact
gagctggactgttcgtcctcctcggtccgaacgcaggcgttcacgctgttgctctgggtg
gccaaggctctccttctccgctaccaccctctgtccacagccctgactgacaagcttttc
tccctgctcagtgactcagaactgggtttgttagctgccgatggattctctctcttgatg
agcgactcgccggacgtcctcaaccgcggttgcaatgccgacgtacgcatcatgtaccgc
cagcgcttcttcaccgaaaactcggccaagctggtcctgggctttaactctgcagcccaa
gagaggaagtctggctacctgaaggcactgtctcacatagtgaacaacctacccagacag
gttcagctcactgagctaccagcactcctgcccctcctgctagaggccctgtcctgtcca
gaccaggcggtgcagctgtccaccctgtcctgcctgcaacctgtcctcatggaccccccc
tctgccctcatcactcagctggaggcgctggtgggccgcaccctcaccctcaccacaagc
cctgctatgaaagtgcggatagcctctctgcgctgtatccatgccctctcccgctttcca
gaacatgagatcatgcctttccgtgcaagggtgctgcgtgccctggctgtgcccctggac
gacctcaagaggatggtgaggagtgaggcggtggtggcacggaatgaatggttcctactg
gggagtccagggggaaggtga

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