Salmo trutta (river trout): 115157782
Help
Entry
115157782 CDS
T08542
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
stru
Salmo trutta (river trout)
Pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115157782
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115157782
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115157782
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C46: hedgehog family
115157782
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Morphogens
115157782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Hom_end_hint
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
115157782
NCBI-ProteinID:
XP_029562073
Ensembl:
ENSSTUG00000045942
UniProt:
A0A674E3Z9
LinkDB
All DBs
Position
21:complement(26231501..26234303)
Genome browser
AA seq
415 aa
AA seq
DB search
MDVMLILIRIALVGFICLFLASDGLACGPGKGYGKQRHPKKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHLEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKSGGCFPGSASVLLEDGRSKLVKELEVGDKVLAADIEGNVVSSD
FLMFLDQDPVSRREFYVFETEKPNRKLRLTPAHLVFITNNVTDDDMTAVFASNVKPGQQV
FVMDEAVDHLKAVTVERIYVEEYEGSYAPVTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHALMSFTGLVKKREDIRQRDGIHWYSDILYHIGTLLLDINSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgcttatactgatacgaattgcgctcgtgggcttcatctgcctgtttcta
gcatccgatgggttggcctgtggtccaggcaagggatatggaaaacaaagacatccgaaa
aaactgaagcctttggcttacaagcagttcattcccaacgtggcggagaagacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggcgatttcagtcatgaatcagtgg
ccgggagtgaagctgcgcgtgacagaaggctgggacgaggatggacaccatttggaagaa
tctttacactatgaaggaagggctgtggatatcaccacctctgacagagataagagcaaa
tatggaatgttatcccggctcgcggtggaggcgggattcgactgggtcaattatgaatcc
aaagcccatattcattgttctgtgaaagcagaaaattcagttgctgcaaagtcgggtggc
tgcttccctggatctgcctcagttctcctcgaggatgggcgaagcaagctggtaaaagaa
ctggaggtgggcgacaaggtgttagcagcagacatagaaggaaatgttgtgtccagcgat
ttcctcatgttcttggaccaagatccagtgtcaagacgagaattttatgtttttgaaaca
gagaagcccaaccgaaagttaagactgacgccggctcacctggtcttcatcaccaataac
gttacggatgacgacatgactgcagtgtttgccagtaatgtaaaacctgggcaacaggtg
tttgttatggacgaggccgtagaccacctgaaggcagtcactgtggaaaggatttacgtg
gaagaatacgagggatcttatgccccagtaacctcacaaggaaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgcg
ccagtccggttggggcatgcgttgatgtccttcacaggtctagtcaaaaagcgcgaggac
atacgtcagagagatggaatacactggtactcagacattttataccacatagggacattg
ctgctggacataaactcctttcatcctcttggaatgtcccaaagctga
DBGET
integrated database retrieval system
