Salmo trutta (river trout): 115157815
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Entry
115157815 CDS
T08542
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115157815
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115157815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115157815
Spliceosome [BR:
stru03041
]
Complex B
Other components
Prp19-related factors
115157815
Complex C
115157815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
115157815
NCBI-ProteinID:
XP_029562087
Ensembl:
ENSSTUG00000026901
LinkDB
All DBs
Position
1:complement(8868166..8881210)
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AA seq
537 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRREPPPYGYRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGGDKGGEDGEARERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRASSEAQYDQRLFNQSKG
MDSGFAGGEDEMYNVYDQPFRRGSDMAQNIYRPTKSSDKDMYGDDLDTLMQSSKFVPDRE
FSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSRGSKDYDHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttacgagctttctacccgcgccgacccagctgtcccaggaccagttggagtca
gaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcagagaa
ccccctccctacggctacaggaagagctgggtgccacgctctctggaggactttggagat
ggcggtgccttccctgagatccacgtggcccagttccctctggagatgggcaggaagaaa
aagacatccaatgccctggcagttcaggtggatgctgagggcaagatcaaatacgatgcc
atcgctagacagggacagggcaaggacaaggtgatcttcagtaagtacacagacctgctt
cctaaggaagtgctgaacgatgatgctcctgagctgcagaagcctgacgaggaggctgtc
aaagagctgacggaaaagacccgcgatgctctgatgaagcaggtctctcagaagatcgct
gcagccatgcctgtgagggcagcagacaaacaggcccctgcacagtacatcaggtacact
ccttcccagcagggtgtggccttcaactccggggccaagcagagggtcatccgtatggtg
gagatgcagaaggaccccatggagcccccacgcttcaagatcaacaagaagattcctcgt
ggtcctccctcccctcctgcaccagtcatgcactctcccagcagaaagatgactgtgaag
gagcaacaggagtggaagattcccccctgtatttcaaactggaagaacgcaaagggttac
accatcccactggacaagcgtctggctgcggacggtagaggactgcagactgttcacatc
aacgagaactttgccaaactggccgaggcgctctacattgctgacagaaaggccagagag
gctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaagaag
gaggagaagctcagagagctggctcagatggcccgagaccgcagggcggggatcaaaggt
cacggaggggacaaaggtggagaagacggtgaggccagagagcgtgacgagatccgtcat
gacaggaggaaagagagacagcacgacaggaacatctccagagctgcccctgataagagg
tcgaagctgcagagagaccaggacagagatgtcagtgagctcatcgctctgggccagccc
aaccctagagcctccagtgaggctcagtacgaccagagactgtttaaccagagcaagggt
atggacagtggttttgcaggcggggaggatgagatgtacaacgtgtacgaccagccgttc
aggagaggcagcgacatggcccagaacatctaccggcccaccaagagctctgacaaggac
atgtatggggacgacctggacacactcatgcagagcagcaagtttgttccggaccgtgag
ttttctggtacggaccacggtcctcgtcgtgacggcccagtccagtttgaggaggatccg
ttcggtctggacaagttcttggaggaggcgaagcaacatggcggctccaagagaccctcc
accagtagaggctccaaggactacgaccacgacaagaaacgcaggaaggagtga
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