Salmo trutta (river trout): 115157867
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Entry
115157867 CDS
T08542
Name
(RefSeq) transcription factor Sox-9-B
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115157867
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115157867
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115157867
NCBI-ProteinID:
XP_029562088
LinkDB
All DBs
Position
2:55695916..55699840
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AA seq
492 aa
AA seq
DB search
MNLLDPFLKMTDEQDKCLSDAPSPSMSEDSVGSPCPSGSGSDTENTRPSENGLLMGPDGP
LVEFKKDDDDKFPVCIRDAVSQVLKGYDWTLVPMPVRMNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSMKNGQSESDDGSEQTHISPGAIFKVLQQADSPASSMGEMHSPGEHSGQSQGPPTPP
TTPPTKTDIQVGKVDLKREGRPLHEGTGRQLNIDFRDVDIGELSSDVISHIETFDVNEFD
QYLPPNGHPGAPGGATGQVSYTGTYGISSSVVSQAAGGATGHSWMTKSQQQQHSLTTLGS
GGEQGQNQRTPTHIKTEQLSPSHYNDQQSSSPPQHVNYGSFNLQHFSSSSYPSITRGQYD
FSDHQGGTNSYYSHAAGGQGSGLYSFSSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHHW
DQQPVYTQLSRP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaaaatgacagacgaacaagacaaatgtctctcagac
gcaccgagtccgagcatgtcagaggactctgtgggatctccgtgcccgtccgggtctggc
tccgacaccgagaacaccagaccgtcagagaacggactgctgatgggtccggacggtccc
ctcgtcgagttcaagaaggacgacgatgacaaattccccgtatgcatccgcgacgcggtg
tcccaggtcctgaaaggctacgactggaccctggttccaatgccagtccgaatgaacgga
tctagtaagaacaagccccacgtcaagagaccgatgaacgcgtttatggtttgggcgcaa
gccgcccggagaaagctggctgatcagtacccgcatctccataacgctgagctgagcaaa
actctggggaaactgtggaggctactcaatgagggtgagaagcgtccgttcgtggaggag
gcagagcgattgagggtacagcacaagaaagaccaccctgactacaagtaccagccccgg
cggaggaagtccatgaagaacggacaaagcgagtctgatgacggcagtgagcagacgcac
atatcaccaggcgcgatcttcaaggtgctccagcaagctgactctccagcctctagcatg
ggagaaatgcactcccccggagaacactccggccagtcccaagggccccccacccctcct
accacccctcctaccaagacggacatccaggtgggcaaggtggacctgaagcgggagggt
cgccccttacatgaaggcacaggtcgccagctcaacatcgacttccgggacgtggacatc
ggcgagctgagtagcgacgtcatctcccacatcgagaccttcgatgtcaacgagttcgac
cagtacctgcctcccaatggtcacccgggtgcacctggtggtgccactggccaagtctcc
tacaccggtacctacggcatcagcagctctgtggtcagccaggcagcagggggtgccaca
gggcacagctggatgacgaagagccagcagcagcagcactccctgaccacgctgggtagt
ggaggggagcagggccagaaccagaggacccccacacacatcaagacagagcagctgagc
cccagccactacaacgatcagcagagctcctcccctccgcagcacgtcaactacggctcc
ttcaacctgcagcacttcagctcgtcctcctacccctccatcacccggggccagtatgac
ttttctgaccaccagggcggcaccaactcctactatagccacgcagccgggggccagggc
tcagggctctactccttcagcagctacatgagccccagccagaggcccatgtacaccccc
atcgcagacacaaccggggtgccctccgtaccccagacccacagtccccagcatcactgg
gaccagcagccagtgtacacacagctctcccggccctga
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