Salmo trutta (river trout): 115157983
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Entry
115157983 CDS
T08542
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115157983
Membrane trafficking [BR:
stru04131
]
Autophagy
Other autophagy associated proteins
Others
115157983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
115157983
NCBI-ProteinID:
XP_029562264
Ensembl:
ENSSTUG00000006168
LinkDB
All DBs
Position
22:7991244..8023949
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AA seq
670 aa
AA seq
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MAEFPIDQKKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGAIRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPEYVSFEPSRTRYPLYDSVEPSTSGRSRSLEHHLENRGGGSRGKHGDPYPEDHLSNSRG
KHGGSYPDYHHPTEGRSRGKGGQRGRDPQGSQSTFDPDSREPRRHREERGDEGERVVRRK
ERPARPQSHNPVERDEAWERERELEWEKDRQRELRRDEERERNTPRHEERSRDGQRHGQR
SQDQENSRDKHREKDRRRERTKSRERGLDEDYYEPIPSSHSRAWTVGGEEGPGDEGEWGP
VARLHSGPSELCEKEARRRPGVMRGERRGYRDPGEGPSMGTERSYTHPAPREPGRIVQGG
PGGRGAVVVGGEYGLGEATQGIAKLDLREQEILDMEVARRLQEEEVKASKMDKRAAQVAQ
DEEIARLLMEQEKKEYKKSREKEKQGMRPEERGMRPEERRRPEGGDFKPNSEEVVRPRSR
EEEYQRPRNHQKPARPLQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGQSSYWRPP
AVFWALAYIT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcccatcgatcaaaagaaactgcccggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataacctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaagccaaggccaagagacaacaccgggac
attgagcgcagcgacaatgagattgcccaggagatacaggaggaattggtccgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctcgaggccaactttgaggaggagtac
tacgaggataaaggagccatccgagcccctctggacctggatgacaaacccaggcgacct
ggttcgaactcccactcccctgagtcgcatccccttaccccgggctcacgacgcgacctc
tcccccgagtacgtttcttttgagcctagcaggaccagataccccctatatgactctgtg
gagcctagcaccagcgggcgttccagatccctcgagcaccatttagagaataggggaggg
ggtagtaggggcaagcatggagacccataccccgaggaccacctctccaatagcaggggg
aaacatgggggcagttacccagactaccatcaccccaccgagggtagaagtagagggaag
gggggccagaggggccgagacccccaggggtcccagtccaccttcgacccagacagccgt
gagcccaggagacacagagaggaaagaggggatgagggagagcgggtggtgaggaggaag
gagaggcccgcccggccgcagtcccacaaccctgtggagagagacgaggcctgggagaga
gaaagagagctggagtgggagaaagaccggcaaagagaactcaggagagacgaggagagg
gagagaaacaccccgagacacgaggagagatcgcgagatggacagagacatgggcagcga
tcgcaagaccaagagaacagccgagacaaacacagagaaaaagacagacgccgagagaga
accaagagcagggagcgaggtcttgatgaagactattacgagcccatacccagcagccac
agccgggcctggactgttggtggggaggagggccctggggatgagggggagtgggggccc
gtggccaggctccactctggccccagtgagctgtgtgagaaggaggccagaaggaggccc
ggcgtgatgaggggggagaggagaggttacagggaccctggggaggggcctagcatgggc
acggagcgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaaggagga
ccggggggtcgcggcgcagtggtggtaggaggggagtacgggctgggcgaggccacccag
ggcatcgccaagctggacctgagggagcaggagatcctggacatggaggtggcccggaga
ctacaggaggaggaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcag
gatgaggagatagcccggctgctgatggagcaggagaagaaggagtacaagaagtccagg
gagaaggagaagcaggggatgaggccggaagagagggggatgaggccggaagagaggagg
cggccagagggaggagacttcaagccaaactcagaggaggtagtgcgtcccaggtcccga
gaggaggaataccagaggcccaggaaccaccaaaagcctgccagacctcttcaacctctt
ccacatgactatgagaatgtggagaccagctacagctactcagagagccactactcttcc
cgcactccagccagacctgaggctgcttacaaaggtcagtccagctactggaggcccccg
gctgtgttttgggccttagcttacattacctga
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