Salmo trutta (river trout): 115158314
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Entry
115158314 CDS
T08542
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
stru
Salmo trutta (river trout)
Pathway
stru04130
SNARE interactions in vesicular transport
stru04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115158314
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115158314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115158314
Membrane trafficking [BR:
stru04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
115158314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
115158314
NCBI-ProteinID:
XP_029562969
Ensembl:
ENSSTUG00000038729
LinkDB
All DBs
Position
22:19531995..19536844
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AA seq
215 aa
AA seq
DB search
MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYIRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggcggatggactgccgcttgccgcctcaatg
caggaggacgaacagttgggtcgggacctgcaacagtaccagagccaggctaaacagctg
ttcaggaaactgaatgaccagagtcccacacgttgcacattagaggcaggctccatgtcc
tttcactacgtcatagaaaaaggagtagtctacctagtgctgtctgaagcaagctttccc
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaggtccccactgtgtcccggccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcgtacatagacagccgagcccgtaggaacctgggcagcatcaacaca
gagctgcaggacgtccagaggatcatggtggccaacattgaggaagtattgcaacgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcgaagaagtac
agaagcgatgccaagtacctgaacactcgctccacctatgctaagctggccgcaggcggg
gtcttcttcatcatgcttatcgtctacatccgcttctggtggctctga
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