Salmo trutta (river trout): 115158315
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Entry
115158315 CDS
T08542
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115158315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
EGF_3
Ank_4
EGF_Teneurin
JAG1-like_EGF2
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
115158315
NCBI-ProteinID:
XP_029562970
Ensembl:
ENSSTUG00000038755
UniProt:
A0A674CY76
LinkDB
All DBs
Position
22:19550708..19605938
Genome browser
AA seq
2488 aa
AA seq
DB search
MGQLPGLASDKVLVFVVCCIRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGE
YCHHKDPCHPGYCLNGGNCSVAVLGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANR
GVCTLLSLDKYKCQCAHGWTDIRCERVDTCLPGPCANGGTCSSLSGGKFSCTCPAGYWGP
RCLNDTDECAASAPVCQNQGTCVNTPGSYRCNCAPGFTGRHCETPYIPCTPSPCLNGGTC
RQTSETSYWCHCLPGFNGTNCDNNIDDCPDHHCRNGGTCMDGVNTYNCKCPPEWTGQSCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTKGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYKGSTCNDDI
NECIIGPNPCEHGGLCVNTDGSFTCNCARGYDGPRCETDINECVSSPCQNDGTCLDRIGD
YSCICMEGFEGTHCEIDINECASSPCLNQGICLDQVKRYVCQCPLGFSGEMCQIDIDECS
STPCLNGAKCIDRPNGYECECAEGFYGPLCKENIDDCDPEPCHHGVCRDGIATFSCDCDP
GYTGSICNIQVMECHSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEINVDDCASNPCEYG
KCQDGINEYKCVCAPGYTGAKCDVDINECNSSPCMSGGTCVDKVNGFICLCPPGTHGPLC
HSGTDHCAPRPCVHGDCVEQQSGYHCECESGWVGQHCDQEKDECQSSPCQHSGSCVDRLN
GYSCQCRPGFTGVNCEVNIEECASSPCENHGTCVDGVNSYTCLCAAPYSGKHCEEELVPC
ASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNRARCINSQGSYVC
KCQPGYSGLNCQTNIDDCSPNPCLNGGSCVDGVGGFSCDCRPGFDGERCEAEMDECASQP
CRNGAMCRDYVNSFVCECRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRCRPGF
YGTFCQYEQNECDSQPCKNGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCRNGGS
CSQSQTTWSCHCPVGWTGLYCDVPNMSCQDYAARNGIPVEMVCKHMGRCVNVGNAHQCQC
QPGYTGSYCDKTVDECQSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHSNPCR
HGGTCINLINRFSCACPPGTHGVQCEVNMDDCAPKPGSWGPRCLNGGQCVDGVGRYTCSC
PPGFAGEHCEGDVNECLSGPCHSPGSLDCVQLANDYQCRCRLGYTGRLCESMVDLCQSKP
CHNSGTCSMNMSSVHGYTCTCQPSFTGFNCGEVEGYNCAQLRCQNGGHCQDSQGGQLHCR
CQPGFSGSRCETVHSCQNRPCLNGGTCMKDPHNPYQYSCRCPAHFSGRHCENVIFDQSPR
TPSCPYVECEQRSGDKVCDPQCNNHECQWDGGDCSLHWRRPWVNCTASVPCWELFRNGRC
DHECDNSGCLFDSFECQESTKSYCKYDDYCADHYANKICDKSCNTEACGWDGLDCSEDTP
AKVVDGTLVIVVLLQPEELLGDVRGFLRSLGTLLHTNLRVKMDAQQKLMVYPYYGLEHDN
AIEGQSATMKRRGKRELDKEVIGSKVYLEIDNRECAESSMDCFSSTELAASFIAAEYLKS
ALPYPVVSVDSDHMDPQKPPVMLYLAVGAAVIILLILVLGVLAAKRKRKHGILWLPDGFL
AKKDDKRREPLGQDDFGMKNFKTQDGGMMDGGQRWMEEEAPPKKPRTEDKPLLPLGVDGG
VDRREWTLQHHKAADISLTPPQADLEADCLDVNVKGPDGFTPLMLASLRNGGASDCGLQA
EEEEESGGDEPGPNVISDLINQGATLMAQTDRTGETALHLAARYARADAAKRLLDAGADA
NAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEEL
VHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSF
EAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGVG
HSLVCGGNGAGYIGMRAGPQGKKSRRGGGKVGGPGGGTAKELKDMKAKRRKKPTGGEGPA
VGAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYTGDAAVASNTANSPPLLSSPSSR
PLLPPVSHMLGQQQSWLGLKHGYGSHMFSLLPQQMGNGHSGMSQHHGQGLLTPMNVTMSR
EQLPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQGQPRSQQGPTHLHCTQGMMYQMPG
VGLQHSLSHSLPHSHGLAHSHGMVHDGQSRQQLPPYQAIQSPVDKYPTPPSQHSYATAGS
EGTTPGHPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPPRH
THIPEQPQSQQTQQNPQQPQHGNMQVFV
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccggtttagcttcggacaaagtattagtcttcgtcgtctgctgcatt
cggctttctttggctcttcagtgtctggatgctgttaagccgtgtgtgaacaatgctacg
tgtgccaccttcaccaacgggacagggtactgcaggtgtgccgcaggcttcctgggtgag
tactgccatcacaaagacccgtgtcatcctggttactgtctgaatggagggaactgctca
gtggctgtgttgggcatcccgggcagtcccacctgctcctgtcccctgggctacaccggg
cagcactgtcagaccccccagaactccacctgctatcccaacaacccttgtgccaacaga
ggagtctgcaccctgctctccctcgacaagtacaagtgccagtgtgctcacggatggaca
gacatacgatgtgagcgtgtggacacctgtctaccaggaccctgtgctaacggaggcacc
tgcagctctctgtccgggggcaagttcagctgtacctgtcctgcaggctactggggtccc
cgctgcctcaatgacactgacgagtgtgctgcctccgccccggtgtgtcagaaccaaggg
acgtgtgtcaacacccccggctcctacagatgtaactgcgcccccgggttcaccggccgc
cactgtgagaccccctacatcccctgcaccccctcgccctgcctcaacgggggcacgtgt
cgccagacttctgagaccagctactggtgccactgcctgccaggtttcaatgggactaac
tgtgacaacaacatagacgactgccccgaccatcactgccgaaatggagggacctgcatg
gatggcgtcaatacctacaattgcaaatgtcccccggaatggactggtcagtcctgtaca
gaggatgtggatgagtgtcgcctgcagcccaacacgtgtcagaacggagggacctgcagc
aacatccagggcagctacacctgtgtgtgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaagggctccacctgtatcgatcgt
gtggcatccttcctctgtgtctgcccctatggaaagacaggtttgctgtgccacgtgaac
gatgcctgcatcagtagtccgtgccgggacggggcgcagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacaagggaagcacctgcaacgacgacatc
aacgagtgcatcattggtccaaacccctgtgagcatggaggattgtgtgtgaacacggat
ggctcattcacatgtaactgtgcaagaggttatgatgggccgcgctgtgagacagacatc
aatgagtgtgtctccagcccctgccagaacgacggcacctgtctggaccgcataggagac
tacagctgcatctgcatggaaggatttgagggaacacactgtgagattgacatcaatgag
tgtgctagctctccatgtctgaaccaagggatctgtctggatcaagtcaaacgctacgtc
tgccagtgccctctaggattcagtggggagatgtgtcagatcgacattgacgagtgttcc
agcacgccctgcctcaacggggccaagtgtatcgaccgacccaacggatacgagtgtgaa
tgtgctgaaggcttctatgggccactgtgtaaggagaacatcgatgactgtgacccggag
ccctgccaccatggtgtgtgtcgtgatggcatcgccaccttctcctgtgactgcgacccg
ggctacaccggctccatatgtaacatccaggtcatggagtgccacagcaacccctgccag
aaccgcggacgctgcatcgacctagtcaacaagtaccagtgcaactgtctgcctggcacc
tcaggggtgaactgtgagatcaatgttgatgactgcgccagtaacccctgtgagtatggg
aagtgccaggatgggatcaacgagtacaagtgtgtctgtgctccagggtacacaggtgca
aaatgtgacgtggacatcaatgagtgtaattccagcccgtgtatgagtgggggcacatgt
gtagacaaggtgaacggcttcatctgcctgtgcccccctggcacccacggccccctgtgc
cactctggcaccgaccactgtgccccccggccctgtgtacacggagactgtgtagagcag
cagagcgggtaccattgtgagtgtgagtctggctgggtcgggcagcactgtgaccaggag
aaggatgagtgccagtccagcccctgccagcatagtggcagctgtgtggacagactcaat
ggatactcctgccagtgtcgccccggattcacaggtgtgaactgcgaggtcaacatagag
gagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggacggagtcaacagctac
acctgcctgtgtgccgctccgtactcaggaaagcactgtgaggaggagttggttccctgt
gcgtctcatccatgtgagcggggaggtgtgtgtcagccaaccccagactacaccttttac
acctgtagatgtcccagcggctggcaaggcccccgttgcactgaggatgtggatgagtgc
aggaagaacccgtgtcagaacagagcccgttgcatcaacagccagggcagctacgtgtgc
aagtgtcagccaggctacagcggcctcaactgccagaccaacatcgatgactgctccccc
aacccgtgtctgaacggcggttcctgtgtggatggagtgggagggttctcctgtgactgc
cggccagggtttgatggggagcgctgtgaggcagagatggatgagtgtgccagtcagccg
tgccggaacggagccatgtgccgtgactacgtcaacagcttcgtctgcgagtgccgtcca
ggcttcgatggaatcctatgtgaacacaacatcccagaatgcactgagagttcttgtctg
aataacgggacctgtgttgacgacatcaacaccttctcgtgtcgttgtcgtcctggtttc
tacgggaccttctgtcagtatgagcagaatgagtgtgactctcaaccctgtaagaacgga
gggacctgtacagacggcctgggctcctaccgctgcacctgccctgtgggctacaatggg
cagaactgccagaactttgtgaacttgtgtagccagccactgtgcaggaacggagggtcc
tgttcccagtcacagaccacctggtcatgtcactgtcctgtgggctggactggtctgtac
tgtgacgtccccaacatgtcctgtcaggactatgctgctcggaatggtatcccagtggag
atggtgtgtaagcacatgggtcgctgtgtgaacgtcggtaatgcccaccagtgtcagtgc
cagcctggctacacaggcagctactgtgacaagactgtggacgagtgccagtccaacccc
tgccgcaacggagccacctgcatggattaccagggcacatatgagtgtatgtgcaaggct
ggctaccagggggtgaactgtgagtatgacgtggatgagtgtcactctaacccttgtcgt
catggaggaacctgcatcaacctcatcaaccgcttctcctgcgcctgcccgcctggtaca
catggtgttcagtgtgaggtgaacatggacgactgtgctcccaagcctggctcctggggg
cctcgctgtctgaacgggggccagtgtgtggatggggtgggccgctacacctgctcctgc
ccccctggcttcgctggagagcactgtgagggggacgtcaatgagtgtctctctggaccc
tgtcactctcctggcagcctggactgtgtgcagctggccaacgactaccagtgccgctgt
cgcctgggctacacaggacgcctctgtgagtccatggtggatctgtgccagtctaagccg
tgccataacagtggcacctgttccatgaacatgagctcagtccatggatacacatgcacc
tgtcaaccaagtttcactggcttcaactgtggagaggtagagggctacaactgtgcccag
ctgcgttgtcagaacggcgggcactgccaggattctcagggtggtcaactgcactgccgt
tgccagccaggcttcagtgggtcgcgctgcgagaccgtccacagctgccagaaccggccc
tgtctgaatggaggaacctgtatgaaggacccacacaacccataccagtacagctgtcgc
tgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgaccagtccccccgc
accccctcctgcccttatgtagagtgtgagcagcggtccggggataaggtgtgtgacccg
cagtgcaacaaccatgagtgccagtgggacggaggggactgttctctacattggcgccgg
ccatgggtcaactgcaccgcctctgtgccctgctgggagctgttccgcaacggccgctgt
gaccacgagtgtgacaactctggctgcctcttcgacagttttgagtgtcaagagagcaca
aagtcctactgcaagtatgatgactactgtgcggaccactatgccaacaagatctgtgac
aagagctgtaacacagaggcatgtggctgggatggcctggactgctctgaggacacccct
gctaaggtggttgatggcacgctggtgatcgtagtgttactgcagcctgaggagctgctg
ggagacgtgagaggcttcctgcgctccctgggaaccctgctgcacaccaacctccgtgtc
aagatggacgcccagcagaaactcatggtgtatccttactatggcctggagcacgacaac
gccattgaaggacagtctgctacaatgaaacgtagaggcaaacgggagctggacaaggag
gttatcgggtctaaggtttacctggagattgataaccgagagtgtgctgagagctccatg
gactgtttctccagcacagagctggctgcatccttcatcgctgcagagtacctgaagtct
gcactgccctaccctgttgtttctgtcgacagtgaccatatggacccccagaagcccccc
gtcatgctgtacctggctgtgggagcagctgtcatcatcctgctcatcctggtgctgggt
gtgctggccgccaagaggaaacgcaaacacggcatcctctggctccccgatggcttcctg
gccaagaaagacgacaagaggagagagcccctgggccaggacgacttcggcatgaagaac
ttcaagacccaggatggagggatgatggacggaggccagcgatggatggaagaggaggct
ccgcccaagaaaccaaggactgaggacaagcccctgctaccactgggtgtggatggagga
gtggaccgacgggagtggactttacaacaccacaaggctgctgacatctctctcactcca
ccacaggctgatctggaagcagactgccttgatgtcaatgtcaaaggaccagatggcttt
acccccctgatgctggcttctctacgaaacggaggggcgtctgattgcggcctgcaggca
gaggaggaagaggagagtgggggagatgagccgggacccaacgtcatctcagacctcatc
aaccagggtgcaacactcatggcccagacagatcgcaccggggagacggcactccacctg
gctgctcgctatgcccgggccgatgccgccaaaaggctgctggatgctggggcagatgcc
aatgctcacgacaacatgggtcgcacacctctccacgctgctgtggcagccgatgcccag
ggagtgttccagatcctgatccgtaaccgggccaccgagttggatgccaggatgaacgat
ggcaccacacctctgatcctggctgccaggctggctgtggagggcatggtggaggaactg
gtccactgccacgcagacatcaatgctgtcgacgaccacggtaagtctgctctgcactgg
gcagctgctgtgaacaatgtggaggccaccctagtgctgctgaagaatggagccaacaga
gacatgcaggacaacaaggaggagaccccattgttcctggcagccagagagggtagtttt
gaggcggcccaggttctgctggaccactactctaatagggacatcacagaccacctggac
cggcttccccgtgacaccgcacaggagcgcatgcaccacgacattgtacgtctgctcgat
cagtacaacctagtccacagccctcacaacggccccaaccacatgggcggaggagtggga
cactccctggtctgtgggggcaatggagcgggctacatcggcatgcgggccgggccccag
ggcaagaagagcaggcggggcggggggaaggttggaggtccgggcgggggtacagccaaa
gagctgaaagacatgaaggctaagcggaggaagaagccaacaggaggagaagggcctgca
gtgggagctgttggaggagccagtggcaacggcactaaagctgcaggagggctgtcagag
agctcagtcaccatgtctcctgtggactccctggagtctccacactcgtacacaggagat
gctgccgtggcatctaacacagccaactctcctcctctcctgagcagcccctcctctagg
cccctgctgcctcccgtcagccacatgctgggccaacagcagagctggctgggtttgaag
catggatacggcagccacatgttcagcctcctcccccagcagatgggtaacggccattct
ggtatgtcccagcaccatggccaaggcctgctcacccccatgaatgtcaccatgagccgc
gagcaactgcctcccatcgttaccttccagatgatggcaccggggggcggacaggccctg
ctgaagcagccccagcctgggcaggtgcagtcacaggggcaaaaccagggccagccccgc
tctcagcagggccctactcacctgcactgcacccagggcatgatgtaccagatgcccggc
gtgggcctccagcacagcctgtcccacagcctcccccactctcacggcctggcccacagc
cacggcatggtgcatgacggccagtcccgccagcagctccctccatatcaggctatccag
agccccgtggataagtaccccacccctccctctcagcacagctacgccaccgctggctcg
gagggcaccaccccggggcacccggctcacccacccagcgagcacccgtacctcaccccc
tcccccgagtcccctgacccctggtcctcctcctccccccactccaactcagactggtct
gacgtcaccaccagccccacccccctggggaacccccatgcactgccgcctccccgccac
acacatattccggagcagccgcagtcccagcagacgcaacagaacccccagcagcctcag
catggcaacatgcaggtgtttgtatag
DBGET
integrated database retrieval system
