Salmo trutta (river trout): 115158362
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Entry
115158362 CDS
T08542
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115158362 (fxr1)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115158362 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
115158362 (fxr1)
mRNA cycle factors
Stress granule specific factors
115158362 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
115158362
NCBI-ProteinID:
XP_029563064
Ensembl:
ENSSTUG00000037446
LinkDB
All DBs
Position
22:21331109..21350216
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AA seq
677 aa
AA seq
DB search
MHCMPNMDELTVEVRGSNGAYYKGFVKDVHDDSLAIAFENNWQPERQVPFSDVRMPPPAD
GKKDIGEGEEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRP
VNVNKAVSKSSFFKCTVPVPDDLKAACESEQAHKDFKKAVGACRIVYCTETSSLVVLSIN
EATVKRVSLLSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASGFQEEFTVRVDLMGLAI
GSHGSNIQQARKVPGVTAIELDEGSGTFRIYGENEEAVKKARNYLEFLEDSVQIPRNLVG
KVIGKNGKVIQEIVDKSGVVRVRIEGDKDGTQPRQETQGMVPFTFVGTKENIGNVQVLLE
YHIAYLNEVEQLRMERLQIDEQLRQIGMGHRPSSGRPADKGYTTDDSVAATAVHTSRSYT
GRGRGRRGPNYTSGYGTNSEQSNASETDSERKDELSDWSLAGEEPERGTRPQRDSRRRAG
PGRGRGPRGRGAGRGAPNTALKDPYGNPYSVLDNTETDQTADTDASDSNLNTNRRRRSRR
RRTDEDTTVIDGMSESDNASLSENGLDDSKAKPQRRNRSSRRSVRPPEERQPVTVADYIS
RAESQSRQTNQKELKNNKKELEQVECIAEHSLSAEANTSNGPSNGRGDEPGRASTERVAK
VAYQGNGDQQPVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcatgcccaacatggatgaactgacggtggaggtccgtggctccaacggagca
tattataagggatttgtcaaagatgtccatgacgattcactcgctattgcctttgaaaac
aattggcaaccagagagacaagttccctttagtgatgttcggatgccacctccagccgat
ggtaaaaaggacatcggggagggagaagaggtggagatcttctcccgggccaatgagcag
gagccatgtggctggtggcttgccaaagtgcgcatgatgaagggagatttctatgtgatt
gagtatgctgcctgtgacgccacatacaatgaaatagtcacatttgaacgtcttcggcct
gtaaatgtcaacaaggcggtgtcaaagagctccttcttcaagtgcaccgtcccagttcct
gacgacctgaaagcagcgtgcgaaagtgaacaagcgcataaagatttcaaaaaggcagtg
ggagcttgtcggattgtgtactgtacagaaacaagtagcttagttgtactgtccataaat
gaagccacagttaagcgagtgtctttgctcagtgacatgcacctgaggagcattcgtact
aagctcatgctcatgtcccgaaatgaggaggccactaaacatctggagagtacaaagcaa
ctggcgtctggtttccaagaggagtttacagtcagggtggacctcatgggccttgccatt
ggaagccatggaagcaacattcaacaagccagaaaagtgcctggagtcactgctattgag
ctggatgaggggagcgggacgttcagaatttacggagagaatgaggaggcagttaagaag
gcaaggaattatctggagtttcttgaagattctgttcagatccccaggaacttggtcggc
aaggtaattggcaagaatgggaaagtcattcaggagatcgttgacaagtctggagtggtg
agagttaggattgaaggggacaaggatggcacacagccacgtcaagaaacacagggaatg
gtcccgtttacatttgtcggcactaaggagaatattgggaatgtccaggtacttctggag
taccacattgcctacctcaacgaagtcgagcagctgcgtatggagagactgcaaatagac
gagcagttgaggcagattgggatgggccacaggccttcatctggccgcccagcagacaag
ggctacaccacagacgacagtgtggctgctaccgccgtgcacaccagccgctcctacacc
ggcagaggccgcggacgcaggggccccaactacacctccggctatggcacaaactctgag
caatccaatgcctctgagactgactctgagcggaaggatgagctgagtgactggtccctg
gcgggagaggaaccggagagggggactcggccacagagagacagcaggaggagagctggt
ccagggaggggtagagggcccaggggccgtggagcagggagaggagcccccaacactgct
ctgaaggatccttatggcaacccctacagtgtgcttgacaacacagagacagaccagacg
gccgacactgatgctagcgactccaacctcaacacaaaccgccgccgccgctcccgccgc
cgccggactgacgaggacacaacagtcattgatggcatgagtgaatcggataacgcttcc
ctcagtgagaatggccttgatgactcaaaagctaaaccacaacggcgtaaccgtagcagc
agacgcagtgtccgcccaccagaggaaaggcaaccagttacagtggcagattacatatcc
cgtgctgaatcacaaagcagacagactaaccaaaaggaactgaaaaataacaaaaaagaa
ctggagcaggttgagtgtattgcggagcacagcctatctgcagaagcaaatacaagcaac
ggccccagcaatggaagaggtgacgaaccaggcagggcttccacagaacgggttgccaaa
gtcgcttaccaagggaatggtgaccagcagcctgtcctgaacggggtttcctaa
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