Salmo trutta (river trout): 115158364
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Entry
115158364 CDS
T08542
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115158364
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115158364
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115158364
NCBI-ProteinID:
XP_029563069
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All DBs
Position
22:21461821..21463885
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQTNSGGTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNNAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccccccgcaccccagacaaattctgggggt
actgggaattcaaattcatctggaaacaaccagaaaaacagtccggaccgagtcaaaaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatct
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagacgctgatgaagaaggac
aagtacactctgccaggtgggcttcttgcaccgggcggcaatggcatgggcgcgggagtg
ggtgtagggggaggcttgggcggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggacaaatggaggttatggcatgatgcaggagcagcttggctacgggcagcac
cctggtttaaacgctcacaacaacgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgactaactcccagacctacatgaacggatcacccacgtat
agcatgtcctactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttccagtccccccgtagtcacgtcgtcgtctcactccaggggt
gctccatgtcagacaggagacctacgggacatgatcagtatgtacttaccgggcgctgag
gtgccggagcaaactgctcaaagcagactccacatgtcccaacattaccagagcgcacct
gtacccggcacgacgattaatggcacactcccattatcacatatgtaa
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