Salmo trutta (river trout): 115158409
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Entry
115158409 CDS
T08542
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03410
Base excision repair
stru03420
Nucleotide excision repair
stru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115158409 (rfc4)
03410 Base excision repair
115158409 (rfc4)
03420 Nucleotide excision repair
115158409 (rfc4)
03430 Mismatch repair
115158409 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115158409 (rfc4)
03036 Chromosome and associated proteins [BR:
stru03036
]
115158409 (rfc4)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115158409 (rfc4)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115158409 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
115158409 (rfc4)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115158409 (rfc4)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115158409 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
115158409 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_16
AAA_assoc_2
AAA_22
AAA_30
AAA_11
Mg_chelatase
SLFN-g3_helicase
DUF815
RuvB_N
AAA_28
Gp44_lid
AAA_5
AAA_14
AAA_24
AAA_19
Cdc6_lid
RPA_interact_N
ResIII
Kinesin
AAA_7
ATPase_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
115158409
NCBI-ProteinID:
XP_029563178
LinkDB
All DBs
Position
22:complement(23650656..23657786)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGTGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQI
VNQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSLCSVIMQQATE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctctgaaagagaaaggt
acagggaccagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagacca
aaatgtatggaagaggtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctactgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtgctg
gagctgaacgcctccgatgagagagggattcaggtggtgagagagaaagtcaagagattt
gcccagctgactgtagcaggccaccgcactgatgggaaaccatgtccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactacatcagcaggatt
attgagcccttgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtc
caagaagagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggt
attgcagcgttggtaaaggtttcagaaggggatcttagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagtgcggtcatagagatagca
ggggttgttcctcccaagatgattgacaatttgctcaaaatctgttacaagggaacattt
gaaaaactagagattgctgttcggaacatggtagatgagggctatgctgccacacagatc
gtcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgacaagtgtttagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcatgcagcaagccactgagtaa
DBGET
integrated database retrieval system