Salmo trutta (river trout): 115158409
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Entry
115158409 CDS
T08542
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03410
Base excision repair
stru03420
Nucleotide excision repair
stru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115158409
03410 Base excision repair
115158409
03420 Nucleotide excision repair
115158409
03430 Mismatch repair
115158409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115158409
03036 Chromosome and associated proteins [BR:
stru03036
]
115158409
03400 DNA repair and recombination proteins [BR:
stru03400
]
115158409
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115158409
DNA Replication Termination Factors
ELG1-RFC complex
115158409
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115158409
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115158409
Check point factors
HRAD17(Rad24)-RFC complex
115158409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_30
AAA_assoc_2
AAA_11
Mg_chelatase
DUF815
SLFN-g3_helicase
RuvB_N
AAA_24
AAA_28
AAA_14
AAA_5
Gp44_lid
AAA_19
RPA_interact_N
Cdc6_lid
ResIII
Kinesin
AAA_7
ATPase_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
115158409
NCBI-ProteinID:
XP_029563178
Ensembl:
ENSSTUG00000048085
LinkDB
All DBs
Position
22:complement(23650656..23657786)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGTGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQI
VNQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSLCSVIMQQATE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctctgaaagagaaaggt
acagggaccagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagacca
aaatgtatggaagaggtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctactgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtgctg
gagctgaacgcctccgatgagagagggattcaggtggtgagagagaaagtcaagagattt
gcccagctgactgtagcaggccaccgcactgatgggaaaccatgtccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactacatcagcaggatt
attgagcccttgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtc
caagaagagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggt
attgcagcgttggtaaaggtttcagaaggggatcttagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagtgcggtcatagagatagca
ggggttgttcctcccaagatgattgacaatttgctcaaaatctgttacaagggaacattt
gaaaaactagagattgctgttcggaacatggtagatgagggctatgctgccacacagatc
gtcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgacaagtgtttagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcatgcagcaagccactgagtaa
DBGET
integrated database retrieval system
