Salmo trutta (river trout): 115158529
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Entry
115158529 CDS
T08542
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04144
Endocytosis
stru04510
Focal adhesion
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115158529
04020 Calcium signaling pathway
115158529
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115158529
09144 Cellular community - eukaryotes
04510 Focal adhesion
115158529
04540 Gap junction
115158529
09142 Cell motility
04810 Regulation of actin cytoskeleton
115158529
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115158529
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115158529
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115158529
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115158529
CD molecules [BR:
stru04090
]
Proteins
115158529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Receptor_2B4
Kinase-like
Motif
Other DBs
NCBI-GeneID:
115158529
NCBI-ProteinID:
XP_029563460
LinkDB
All DBs
Position
22:28618170..28642377
Genome browser
AA seq
1472 aa
AA seq
DB search
MDEMKTCLIIGVFLFGLLSVTRGLATPTIVSTEDEFVLEPLSVFNISCTGKRNVAWVEPL
PDDTFVLPGYYTSTLFIYNASVTHTGYYSCKYQDKEGDEEVDGVANDAFIYVFVPDPEIP
FVPEESDRMLVPVYPNRTIIPCRVSDPQSQVVLKSAPSGVEVDAVYKNKIGFIGNLDAGL
YICETTVNGMTMTSDTYTVEANKQMENVHVEVKASEEAVRLGEPFNITCVAPPGLPYQQQ
WLHPRKQAVHAVQMKQTLPDRVVYTLSIPAATSQDSGVYECSITNNFSGEIRANRVAVTV
FEENTFVMLDHSGIGVVEFVSMMEETEFTISIEAFPAPKVTWLKDGIAITENSYFLTKTS
RLEGNQHQSTLTLRQPLEEDSGNYTIMVLSNPHTAQFSFTLKVKVLFQPASAPVLFQPAS
APVLFPQREEMVVPLHTPFTLTCRGEAELAWETPVYLSEQTEEDNSGLFVTTVTVENATV
ANTGFYTCFYNGGNSTEEGEDSSIYIYVPDPEVPFVPSLVPFGNHVLNGHDEMEIQCRVS
DPSANVTLVNTDTQQAVPMTVYDSKRGAVGFFSAGTYVCKALINGEEHLSEEYIVHGWAG
GLELRVELKAQKTALLVGDTITVTCVARGSEILEDHWKYPGKLVNRGLKSVSENKRDQEI
QYIMTVPQASAKDSGIYACSITDIISNESQTKELAITVYESPFVSLRPVFSSQESADLDE
SREFRANIDSFPSAQVTWLKDGLPLNYVAAEITTSLQQLSETRYQSVLTLIRAKEEDSGN
YTIRVQNGNQTHSHSFSLQVKVPAVIVDLMDLHHGSASGQSVVCIAGGMPTPEVEWFICK
NIKHCANDSSQWVPLPTNDTDITVEAHIDQDNQLESQVIFVRLENTLAVRCLARNEMAAV
SREVKLVSQGPHSELPVTAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGH
EYIYVDPMQLPYDSRWEFSRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLK
PTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPTYIITEYCFYGDLVNYLHKNR
ESFLSLHSEKTKKDLDIFGINPADESSRSYVILSFESGKGDYMEMKQADTTQYVPMLEMS
DASKYSDIQRSEYDHPPSQKGDNEMDSLLSEDGNEGLSTTDLLSFTYQVARGMEFLSSKN
CVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYT
TISDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHAPADVYEMMIKCW
NSEPEKRPSFLSLSESVASLLPSGYKRCFERASHEFLKSDHPAVTRVQVESDDAYIGITY
KSQDKLKDRESGFDEQRLSSDSGYIIPLPDLDPLSDDEYIKRNRHSSQTSEESAIETGSS
FTLAKREGETLEDISLLDEMCLDSELVEDSFL
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatgaagacatgtctcatcattggggttttcttgtttgggttgttatcagtt
acccgcgggctggccacaccgaccattgtatcaactgaagatgagtttgttctcgagccg
ctctccgtgttcaacatcagctgcaccggtaaaaggaacgttgcttgggtcgagccccta
ccagacgacacattcgttttgcctggatattacacctccacgctcttcatctacaacgct
tctgtgacacacaccggatattactcctgcaaataccaagacaaagagggcgatgaagag
gtggatggcgtagccaatgatgcgttcatatacgttttcgtcccagatcccgagattcca
tttgtgcctgaggagtcagaccgcatgctagtcccagtctatcccaatagaaccatcatc
ccatgcagggtgtcagaccctcaatcccaggtggtcctaaagagcgctcccagtggagta
gaggtggacgcagtttataagaacaagatcggcttcattggcaacctggacgctggattg
tacatctgtgagaccaccgtgaacggcatgacaatgacgagtgacacttacaccgtggag
gccaacaaacagatggagaacgtccatgtggaggtgaaggccagtgaagaggcagtaaga
ctgggggaacccttcaacatcacctgtgtggcacctccaggactgccctaccagcagcag
tggctccaccccaggaaacaggctgtgcatgcagtccagatgaaacagactctgcctgat
agagtggtctacaccctcagtatcccagcagccacctctcaggacagtggggtgtatgag
tgttccatcaccaacaacttcagtggagagatcagagccaacagggtggctgtcactgtc
ttcgaagagaacacctttgtgatgttggatcacagtgggattggagtggtggagtttgtc
agtatgatggaggagacagagttcaccatcagtattgaagccttccctgctcctaaagtc
acctggctgaaagacggtatcgccatcactgagaacagctacttcctcaccaagaccagc
cgactggaggggaaccagcatcagagcactctgactcttcggcagccactagaggaggac
agtggtaactacaccatcatggtcctcagcaaccctcacactgcccagttctccttcacc
ctcaaagtgaaagtgctgttccagccagcctcagccccagtgctgttccagccagcctca
gccccagtgctgttcccccagagagaggagatggttgttcccctccacacccccttcact
ctgacctgcaggggtgaggccgagctggcctgggaaacacccgtctacctatcagagcag
acagaggaggacaacagcggcctgttcgtcaccacggttaccgtagagaacgccactgtg
gcaaacactggtttctacacctgcttctacaatggagggaactccactgaggagggagag
gacagcagcatctacatatatgtgccagatccagaggtgccctttgtcccctctctggtg
ccctttggcaaccacgtcctgaatggtcatgatgagatggagatccagtgtcgcgtgtcg
gaccccagtgccaatgtgaccctggtcaacactgatacccagcaggccgtgcccatgact
gtctacgacagcaagaggggcgccgtgggcttcttcagtgcaggaacctatgtctgtaag
gccctcatcaatggagaggagcacctcagtgaggagtacatcgtccatggctgggcaggg
gggttagagctgcgtgtggagctgaaggcccagaagactgctctcttggtgggagacacc
atcactgtcacctgtgtggcccgggggtctgagatactggaagaccactggaagtaccct
ggaaagctggtgaaccgtggcttgaagtcggtcagcgagaataagagggaccaggagatc
cagtacatcatgactgtcccccaggcctcagccaaagacagtggcatctacgcctgctcc
attactgacatcatcagcaatgagagccagaccaaggagctggccatcactgtctatgag
agcccatttgtgtcgctgcgccctgtgttcagttctcaggagtcagcagacctggatgag
agcagagagttccgggccaacatcgactccttccccagcgcccaggtcacatggctcaaa
gatggcctccccctcaactatgtggcggctgagataaccaccagcctccagcagctcagc
gagaccaggtaccagagtgttctgaccctgatccgggccaaggaggaggacagtgggaac
tacaccatcagagtgcagaacgggaaccagacccacagccacagcttcagcctgcaggtc
aaagtacctgcagtcattgtggacctgatggacctccaccatggctcagcctcaggccag
tctgtagtgtgtatcgctggaggcatgcccactcctgaggtggagtggttcatctgcaag
aacataaaacactgtgccaacgactcgtctcagtgggtgcccctgccaaccaacgacaca
gatatcactgtggaagcgcacatcgaccaggacaaccagctggagagccaggtgatcttc
gtgcgtcttgagaacactctggccgtccgctgcctggccaggaacgagatggccgccgtt
agcagggaggtgaagctggtgtcacaaggcccccactctgagctgcctgtaactgctgct
gttttggtgctgctggtcattgtcatcatctcactcattgtcctggtcattatctggaaa
cagaagcctcgctatgagatccgctggagggtgatagagtcagtgagccctgatggccat
gagtacatctacgtggaccccatgcagctgccctatgactccagatgggagttctctcgc
gatgggctcgtactgggtcgtgtcctgggctctggggcgtttgggaaggtggtggaggga
actgcatatggactcagccgctcccagcccgtcatgaaggtggctgtgaagatgctgaaa
cccacggcccgctccagtgagaaacaggccctgatgtcagagctgaagatcatgactcac
ctgggccctcacctcaacatcgtcaacctgctgggggcctgcaccaagtcaggccccacc
tacatcatcactgagtactgcttctatggagacctggtcaactacctgcacaagaacaga
gaaagcttcctcagcttgcactcagagaagaccaagaaagacctggacatctttggcata
aaccctgcagacgagagcagcaggagctatgtgatcctgtcctttgaaagtggtaaagga
gactacatggagatgaagcaggcagacaccacgcagtacgtgcccatgctggagatgagt
gatgcctccaagtactctgatatccagaggtctgaatatgaccacccaccatcacagaag
ggtgataatgagatggacagcctgctgtcagaagacggcaacgagggcctcagcaccaca
gaccttctcagctttacctaccaagtggccagaggcatggagttcctgtcctctaagaat
tgtgtgcatcgggacctggctgccaggaacgtcctgctctctcaggggaaaatagtgaag
atctgtgactttggcctggccagagacatcatgcatgacaacaactatgtctccaaaggc
agtaccttcctgccagtgaagtggatggctcctgagagtatctttgacaacatgtacacc
accatcagtgatgtctggtcctacggcatcctcctctgggagattttctctctaggtggc
accccatacccagggatggtagtggactcaagcttctacaacaagatcaagagtggctac
aggatggccaaacctgagcacgcccccgctgatgtgtatgagatgatgataaagtgttgg
aacagtgagcctgagaagaggccttccttcctcagcctgagtgagagtgtggcttcactg
ctgccctccggctacaagaggtgcttcgagagggcaagccatgagttcctgaagagtgac
catccagcagtgaccagggtccaggtggagagtgatgacgcctacattgggatcacctat
aagagtcaggacaagttgaaggacagggagagtggcttcgacgagcagcgcctcagctct
gacagcggttacattatcccccttcccgacctggaccctctgtctgatgatgagtacatc
aagaggaaccgccacagctctcagacatctgaagagagtgccatagagacaggttccagc
ttcacgctggccaagagagaaggagagaccctggaggacatcagcctgttggatgagatg
tgtctggactcagagctggtggaagacagcttcctgtga
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integrated database retrieval system
