Salmo trutta (river trout): 115158550
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Entry
115158550 CDS
T08542
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115158550
Membrane trafficking [BR:
stru04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115158550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
LRR_4
Motif
Other DBs
NCBI-GeneID:
115158550
NCBI-ProteinID:
XP_029563505
LinkDB
All DBs
Position
22:complement(29115262..29153594)
Genome browser
AA seq
1538 aa
AA seq
DB search
MASKEITASCFVSVSRDITESIRKIIDKSSTKFIRGIKLDTKNGKSEDRILVLTTWRLYL
LVAKVPTKIEVTFNFLEIRAMNRHPEHQVVIDTDKSTYSLWLQSSDHLSHVVSHVNFALS
RMFNNSVFAPSICHSDSELSEGSRKYSPSSETSMETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVILASMAYNTWFTKLYCKDIRIGSEVTE
QVLHTLSKSSSLEEITLENAGLKSDFPQKLSVALSENPASVIHSLNLAHNTLDNQGVANL
IQQVCRLSKGLRLLNLSKTSLNSKGVVSLSQALCSSDEYSNTLLHLDLSKNPGFLSGEDA
SNLCLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSYLNLSKNTFSHRKVKETLP
LSCQFFSSAFSLTHVSLASMKLPPEALRSLFIGLTTNPHVNDLHLDISGCELKSAGASVI
QELFPRLSSIATLDISDNGLDADLLSVLPALSRHTSLKHLYLGKNFNIKGRVLEEILHKL
VQLIQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDIGAKMLSKAL
QINTTLRSVTWDRNNTSATGFLDVARALEHNFTLQYMPLPLSDISQAYRSTSERTEQALT
KIQRALLRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLSVCVQQQVCVLRGVGEMEEIQ
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDQLAGELTKAADKELQVIVDSMVS
LCRELCPLSSSAAERLSPRLSSVSEHVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSY
LTNSIVDQILQELYTTHKTLTRRVSQVKRWEVTCDGGTGLRSHRHRDSLDLTDDEMGTSI
VSIDTIAIKKRSSRTRRIRPVSTRLSQCDDSSSSPPPSASSFFSSFSALSRSTSWEGLSA
LPTQGAPLHHVTRVRPRPPRRHRAGHAPSDTHCTENGAVTPIDHGLPDLYTKKVLPDSQL
SSLHKAHSLRRKKRRNMLAIFGFRRNRNSTLSNQGPDSGGDGCGEECRTVAMAPTGTATE
NVYTLLQPPLSAARAGSPGEGGDVEDQRLEEPVGLSLQPVQSIPPQPGMPGSRHPFYSPS
QQSELETEHEQPADTDRQVDRQWTEDRWVDRQWTEGNHTDRERTLIRPADRQAERHWPED
RLSDKTWTEGRTAERQMDRYWTERRHADRHMERQWTVDRHTPRQIDRQFDRHRQWTVSRQ
QTDRTWAEGRPKDIQTDRQWIDSRQSGRQTDRQAQGQHLAQSPLPPYPSDRTPSPKSETD
SQKNMDRQKYSDTQMDRHLRSDTAVGQVEGWRDGGGVPPGRVSTSASKPDPPPQSSKPNL
SKLRQRHLQESSEEEAGGERHGGRMERKERDRDAEGRPPPIPEKPKTSSYVSSLNEYANE
RLIRPPASSAFRKPLLGLAYRAVSQGEEAVRPQAPVKPQRNRKAMSCDTGTDRDSPNNLE
KPPNRKPPVKKPRLPQNRNKSLDYPDSVSLASGNSELL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagataactgcctcttgttttgtcagtgtgagcagggatattacagag
agtatcaggaagattattgacaagtcctcaaccaagtttatacgtggcattaagcttgac
accaaaaatggcaaatcagaggataggatactggttctcacaacatggagactctatctc
ctggttgccaaggttccaacaaagatagaggtgacatttaacttcttggagatccgagcc
atgaaccgtcacccagagcatcaggtcgtcatagacacggacaagtccacttattccttg
tggctacagtcaagtgaccacctcagtcatgtggtcagccatgttaactttgccctgtcc
agaatgtttaacaactctgtgtttgctccttccatctgtcattcagacagtgaactttct
gagggaagcaggaagtactcccccagctcagagacatctatggaaacccagagggcctgt
ggagggttttccgagacctacgctgccctgtgtgactataatggaatcagctgcaaggag
gaagtgcagtgggatgtggacactatctatcactcccaagacaacagggagtttaatcta
gtggacttcagccacctggaaagcagggacttggcagttattttggcctcaatggcgtac
aatacatggttcaccaaactatactgtaaggacatacgcatagggtcagaggtcactgag
caggttctgcacaccctcagtaagtcctccagtctggaagagatcactctggagaatgct
ggtctcaaatctgactttcctcagaagctgtcagttgcgctctcagagaatcctgcttct
gtcatccactctctgaatctggcccacaacacactggacaaccaaggtgtggctaacctc
atccagcaagtgtgtcgcctcagcaaaggactgcgtctcctcaacctctccaagacctcc
ctcaactccaaaggtgtggtgtctctgtctcaggctctgtgctccagtgatgagtattct
aacactttgctgcacctggacctgagcaagaaccctgggttcctgtctggggaggatgcc
tcgaatctgtgcctgttcctgtcccagcctaattgtctggtccatttggacctgtctggc
actgactgttctgttgactcgctatttggggctctgctgaggggttgttgtgccgatctc
tcctacttgaatctctccaaaaataccttctcccacaggaaagtgaaggagaccctgccg
ttgtcctgtcagtttttcagctcggccttcagtctcacccatgtcagcctggcctctatg
aagctgccccctgaggccctgaggtctctcttcatcggcctgaccacaaaccctcacgtg
aatgacctacacctggacattagtggctgtgagctgaaatctgcaggagcttctgtgatc
caggagctgttccctaggctctcctccatcgccactctggacatctcagacaacgggctg
gatgcagaccttctctcagttctaccagctctctccagacacacctccctaaagcacctg
tatctgggcaagaacttcaacatcaagggcagggtgctggaggaaatcctacacaagctg
gtccaactcatacaggaagaggagtgtgccctccagtccctctcactggctgactcgcga
ctgcgttctcggggcacagtgctggtaaacgctctgggcagcaacacctgtctgcgaaag
gtggacctgagtgggaacagcctggaggacattggagccaagatgctgagcaaagcccta
cagatcaacaccacactcaggagtgtgacatgggatcgtaacaacacctcagctacagga
ttcctggatgtggctcgagcccttgaacataacttcaccttgcagtacatgcccctcccc
ctcagtgacatcagccaggcgtaccgtagtacctccgagaggacagagcaggcactgacc
aagatccagcgtgctctgctgcggaacaaccagactcagcgcttctctcagagacaggct
ctacggctgcaccagggcctggtcaccagcactgctgaacaggtgatggagcgtctgagt
gtgtgtgtgcagcagcaggtgtgtgtgctgcgtggagtaggggagatggaggagattcaa
gctgctaaacaggtgctgaaggaggccagaaactcccgtgcgctgtacccctctctctgt
gagctagctcatgtgctgtcagtagacgggccagtcagacagagactggaccaactggca
ggggaactgaccaaagcagctgacaaggaactacaggtgattgttgattccatggtgtct
ctctgtcgtgagttgtgcccgctgtcctcctctgcagcagagagattaagtcctcggctc
tcgtctgtctcggagcacgtctccatccctcgttccgccatccgcacagccttgatggag
agagcagcacaggacattcacagagcgctggaggaggtgaagctctcagtggtctcctat
ctcaccaactccatcgtggatcagatcttacaagagctctacaccactcacaagactctg
acgcgtcgggtgtcccaggtgaagcgctgggaggtgacatgtgatggaggaacaggtctg
aggtcacacagacacagagactctctggacctcacagatgatgagatgggcaccagtata
gtgagcattgacacaattgccattaagaagcgtagctctagaactagacgtattcgacct
gtctctaccaggctgagccagtgtgatgactccagctcctccccacccccctctgcgtcc
tcttttttctcttctttctcggccctctctcgctctacatcctgggaggggctgtctgcg
ctccctacccaaggtgcacctcttcatcatgtgacgcgggttaggccaaggcccccacgg
aggcaccgagcaggacatgccccctctgacacacattgcactgaaaatggagctgtcacc
cctattgatcatggactcccagatttatacaccaagaaagtgctccctgatagtcagtta
tcctctctccataaagcccactctctcagacgaaagaagagacgcaatatgctggccatc
tttggtttccgtaggaaccgtaactcaacgctctccaatcagggaccagattctggcgga
gacggatgtggggaagagtgtcgcactgtcgccatggcacccaccgggacagccactgag
aatgtctacacgctgctgcagccccctctctctgctgccagggcaggctctcctggtgag
gggggggatgtggaggaccagaggttggaggagccagtgggcctgagcctgcagccagtg
cagagcataccaccacagcctggcatgccaggtagcagacaccccttctactcacccagc
cagcaatcagagctagagacagagcacgagcaacctgcagatacagacagacaggtggac
agacagtggacagaggacagatgggtggacagacagtggacagaggggaatcacacagac
agagagaggacattaataagaccggctgacagacaggctgaacggcactggccagaggac
agactctcagacaaaacatggacagagggaagaacggcagaaagacagatggacagatat
tggacggagagaaggcatgcagatagacacatggaaagacagtggacagttgacagacac
acaccgagacagatcgacagacagtttgatcgacatagacagtggacggtgagcagacaa
cagacagacagaacgtgggcagagggtcgaccgaaagacatacagacagacagacagtgg
atagacagcaggcagtcaggcagacagactgacagacaagcccagggacaacatctggct
cagagtcctctgcccccttatccatcagacaggactccatcacctaaaagtgagactgac
tctcagaaaaacatggacagacagaagtactctgacacacagatggacagacacctgcgc
tcagacactgctgtaggacaggtggaggggtggagggatggaggaggggttccccctgga
cgggtttctacgagtgcatctaaaccagaccctcctcctcagagcagcaaacccaacctg
tccaaactgagacagagacatctacaggagagctctgaggaggaagcaggcggagagagg
catggtggaagaatggaaaggaaagagagagacagagatgcagagggacggcctcctccc
attcctgaaaagccaaagacatcatcctatgtgtcttctctaaacgagtatgccaatgaa
aggctgatccggcctcctgcatcatctgcattcagaaagccattgctgggattggcctac
agggctgtcagccaaggtgaggaagcagtgaggcctcaagcccccgtgaaaccccagagg
aacagaaaggctatgtcttgtgacacaggcactgacagggatagccctaataatcttgag
aagcccccaaatcgcaaaccccctgtgaaaaaacctagactaccccagaacagaaacaaa
tccttggactatcctgacagtgtcagcttagcgtctggtaacagcgagctgttgtga
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integrated database retrieval system
