Salmo trutta (river trout): 115158611
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Entry
115158611 CDS
T08542
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115158611 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115158611 (rad54l)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115158611 (rad54l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
115158611
NCBI-ProteinID:
XP_029563633
Ensembl:
ENSSTUG00000007046
UniProt:
A0A673X677
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Position
22:33412528..33421072
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AA seq
742 aa
AA seq
DB search
MRRSLAPSQVAKRKHGGDSSEDEDWNPEEDTKRRKGGSESRESYISPFRKPLTQLTNQPV
CVDSNAHEAFIRSILSKPFKIPIPNYTGSLGIRALGLKRAGVRKSLHDPFEDGALVLYEP
PVLSAHELIKAEKDKMPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIADSYGCIMAD
EMGLGKTLQCIALMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRITPVAI
DGGSKEEIDRKLVNFMTQHGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKN
SDNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILK
GRDADASGKDRQVGEEKLKELISIVNGCLIRRTSDILSKYLPVKIEQVVCCRLTPLQSEL
YKLFLRQAKPLQTLQQQGKISVSSLSSITSLKKLCNHPALIYDKCVEGDEGFNGALDLFP
TGYSTKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVR
LDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQ
AMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELR
ELFHLSEETTSDTHDRFRCRRCVNGRQVRPPPEDSDCTCDLSQWQHCSDKRGLRDPILQA
SWDAAISFVFHQRSHEDQRGVV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagcctagcaccaagccaggttgccaaaaggaagcatggaggagattcgtcc
gaggatgaggattggaatccagaagaagataccaaaagaaggaaaggaggaagtgaaagc
agagaaagctatatctctcccttcagaaagcctttgacacagttgaccaaccagcctgta
tgtgtggacagcaatgcacacgaagccttcattcgaagtattctctcaaaaccttttaaa
atccccatccccaattatacaggctctctggggataagagcactaggactgaagcgtgcg
ggggtgaggaagtctcttcacgacccatttgaagacggtgcactggtcctctatgagcct
ccagtgctgagcgctcatgagctgataaaagcagagaaagataaaatgcctgtacatgtt
gtcgtggatccagtccttggtaaggtcctcagaccccatcagagagagggagtgaaattc
ctgtgggactgtgtgaccgggagacgtattgccgactcatatggctgcatcatggctgat
gagatggggctggggaaaaccctgcagtgtattgccctcatgtggaccctgctgcgccag
agtcctgatgccaagcctgagattgacaaggccattgttgtttcaccgtccagtctggtt
cgtaactggtacaacgaggtgggaaagtggctgggcggacgcatcacaccggtggccatc
gatggaggatccaaggaggagatagacagaaaactagtgaacttcatgacccagcatggc
ttgagggttcctactccaatcctgatcatttcatacgagacgttccggcttcatgctgaa
gttttacacaaaggaaaagtgggacttgtcatctgtgatgagggtcatcggctgaagaac
tcggacaaccaaacgtaccaggctctgaatgctatgagtgcccagaggagggtgctgatc
tcaggcactcccattcagaatgacctgctggaatacttcagtctggtgcactttgtcaac
gctggcatcctgggaacagcccaggagtttaagaagcgttttgagctccccatcctgaag
ggtcgtgatgcagacgccagcggcaaagacaggcaggttggagaggagaaactcaaggag
ctgatcagcattgtcaatggatgcttgattcggagaacctcagacatcctctcaaagtat
cttcctgttaagatcgagcaggtcgtctgttgcaggctgacccccctccagtcagagctg
tataaactgttcctgaggcaggctaagcccttacagacactgcagcagcagggcaagatc
agtgtctcctctctgtcctccatcacctctctcaagaagctctgtaaccacccggctctc
atctatgataagtgtgtggagggagatgagggcttcaatggggccctggatctcttccct
acaggatactccaccaaggctgtggagccacagctttctggaaaaatgctggttctggac
tatatcctggccatgaccagaagcaccaccagtgacaaagtggtgttggtctccaactac
acacaaacactggacctctttgagaagctctgtcgaactcgaagatacctctacgttcgg
cttgatggcacaatgtccatcaagaagagagcaaagatagtggagaggttcaacagccca
tctagcccagagttcatatttatgctgagcagcaaagctggggggtgtggcctgaatctg
attggtgctaatcgcctggtgatgtttgaccctgactggaacccagccaatgacgagcag
gccatggctcgagtttggagagatggacagaaaaagacctgctacatctacagactgctt
tcaacagggacaattgaggagaagatccttcagaggcaggcccataagaaggctctgagc
agctgtgtggtggacgaagagcaggatgtggagagacacttctctctgggggagctacga
gaactcttccatctcagtgaggagaccaccagtgacacgcatgacaggttccgctgtcgg
cgctgtgtgaatgggcgacaggtgcggccccctcctgaggactctgattgtacctgtgac
ctgtcccagtggcaacactgctctgacaagaggggcctgagagaccccatactgcaggcc
tcctgggacgctgccatctcctttgtcttccaccagcgctcccacgaggaccagagaggg
gtcgtgtga
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