Salmo trutta (river trout): 115158682
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Entry
115158682 CDS
T08542
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115158682
09122 Translation
03013 Nucleocytoplasmic transport
115158682
03015 mRNA surveillance pathway
115158682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115158682
03041 Spliceosome [BR:
stru03041
]
115158682
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115158682
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115158682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
GlyRS_ins_1
Motif
Other DBs
NCBI-GeneID:
115158682
NCBI-ProteinID:
XP_029563742
UniProt:
A0A674BWB9
LinkDB
All DBs
Position
22:complement(37660166..37664296)
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AA seq
147 aa
AA seq
DB search
MSTTDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE
LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL
RVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaactgacttttatttgagatattatgtcgggcacaagggcaagtttggacac
gagttcttggaattcgagtttagaccggacggtaaactgaggtacgcgaacaacagcaac
tacaagaatgacgtcatgatcagaaaagaggcctatgtacacaagagtgtgatggaggaa
ctgaagaggatcatagatgacagtgagatcaccaaggaagatgatgcattgtggccgccc
ccagacagagtgggcagacaggagctggagatcgtcattggcgacgagcacatttccttc
acaacttccaagattggttccttgattgacgtcaaccagtcaaaggacccagaaggcctc
cgcgtgttctactacctggttcaggatttgaaatgtctcgtcttcagtctcattggatta
cacttcaagatcaagcccatctaa
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