Salmo trutta (river trout): 115158750
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Entry
115158750 CDS
T08542
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115158750 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115158750 (prpf38a)
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115158750 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
115158750 (prpf38a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
115158750
NCBI-ProteinID:
XP_029563899
Ensembl:
ENSSTUG00000016919
LinkDB
All DBs
Position
22:41648936..41652403
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AA seq
309 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatatttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggactgactgccgaacttgtcgttgacaaagccatggcgctgaagtttgtcggaggagtc
tatggaggaaatatcaaacctacaccgtttctgtgtctcactctgaagatgctacagatc
cagccagaaaaagacatcattgtagaattcatcaagaatgaggatttcaagtatgtccgc
ttgctaggggcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactaccgaaaaatcaagagtcagaaccgaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacacgctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcggagttgttagacacacgc
atcagcgccttagaagaggacctggatgaagtggagaccagtgacgaggaagacgaagaa
gaggagaagccagagagagttcagaccccggagccccacagacggagttatcgggacaac
gaccgccctcgccgttcgccctctccacgctacagacgcagccgttcacccagacggagg
agcagatcacccaagagacgaagcccatcccccagacgagagcgccaccgcagcaaaagt
ccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtccccaggccat
cacagaagccacaggcatcgcagtcactccaaatccccagagaggagttcaaaaaagagc
cacaagaagagtcgaagagggaacgagtga
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