Salmo trutta (river trout): 115158828
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Entry
115158828 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115158828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115158828
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115158828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
C1_2
Motif
Other DBs
NCBI-GeneID:
115158828
NCBI-ProteinID:
XP_029564039
Ensembl:
ENSSTUG00000028204
UniProt:
A0A674B075
LinkDB
All DBs
Position
22:complement(46158901..46242393)
Genome browser
AA seq
1586 aa
AA seq
DB search
MADSPLNNSWPSFSKLWMKRWSFKRGSECKPCSTLQPCVSVSEASSLSSSLSPASVVKDV
FFNSATEEKDGESDYENPSLDEDVDSSVEDLLSLSCSFIDSNYYKGHQGVHSVSAATETS
PPTLGFPSRYRDSPQHSSQLHPNPHPYSYPYQETENKSIPHHTIVVTQFNPNLLQSGSAM
DGYNSESVDPVDPVGVVNTMVNLNGPGGQGDMMDSDRESFPILIRSMSTSRRHSLGMPMS
PIDLGRRLSLDAIDSDGERDDSLLSPSHQQAFIYPGCPEQEVEESDGTDLSRSEAKETET
EECSRSGRTYSRAEILATDERVHVAHVSRVVETSKRAAGEELDPEEPNLHTAEGQTHIAR
QRTTRPEGKETGSSVTWYEFLSNENEEEEDRTEKVEKGTKVKRTLSSLRSRMTGSFNKDK
QGKNREKEQQKGKEREPKEKEKLHHSSSSGHNLVPGSFSSCATCSLCSKALQKKHGLQCL
NCAVNVHKSCRTLLAECNSSKNKKDSLHKTSTTASLNLALSDRDQSSSALDCPPGSPRIP
GMTLTPRGPSAQPASAAFNSSSSSHTAAASLNHSHNHSHNSRTGSLSGDMDEPDSLRFGV
KRLNEDAVSLAPSTTDSIVVEDAYYSAFRADLESDAQDLEVESWSLAVDQQYLKKYTKEM
VKRQDVIYELIQTEMHHVRTLKIMLRVYMRELKEHLQVDELFPRLESLLELHTDFLSRLK
ERRRDSMQPGSDRNYNIQRLADILTTQFSGERGDRMKENYGDFCSHHTEAVNYYKEQLHN
NRKFQSLIRKVNNLSVVRRLGVTECILLVTQRVTKYPVLVERIVQNTEVGTEEHEELTRS
LGLIKDCIVQVDALVNLHEKASRLRDIAHKMEPKSLGKIKDGRVFHREDLAQGRRRLLHE
GTANHKAASGRLKDVLAVLLSDVLLLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAHEE
KAMFLICASSNEPEMYEIHTASKEERNSWMTHIRQAVESCPHTEERLFSEQEEARAARFN
EFQERLSQKDTQIVTILTEKLQLFSDMCLVSGHGDMTFRSHLMLRGDASDLHQGETLLKG
TITDVESLQNLLLSGVREPASRLEEGSGSGALPRRADTFGGYDSRPIILNKKGIVKKKNH
SGGDIARDGTQKGCSDPQLTKIQASQTLEQPQADEEEEASPATWNPIWSNTFPEAEFFDR
VLMLSQRLYSLQAIVAKQDSHIELQRASLTERASFPGRHRGNVLLEQEKQRTLALQREEL
ATFHKLQSQHRQEQARWERERDRHQLQAEAMEGMLRQREEDCRRLEEKLAEEREDLERQR
ETYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVMPFTSSLNGDLLLGVGSSGSVGS
DLTLPQKVLVRHSPSVAPADYLERPEVLARGQSANATALPVKKEVPLHLCSTTNQQHKQV
GVQQQIPTKLAALSSKSSKSAKATHRTDSTASLDMKQMLPMKLSAREDGSLKAKRSISPN
QQLPHTLVHSQSMHLTVSLSPPDRGPENQPASLQKPPSQASNPLHIQPQAPNPLHTKSPN
PSPAQAPVHGPSLPPPCRISEDVIFF
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcccttaaacaactcctggccttctttctccaaactctggatgaaacgt
tggtccttcaagagaggatcagaatgtaagccatgttcaaccctgcagccctgtgtgagt
gtctcagaggcatcctccttgtcctcgtccctgtccccagcctccgtcgttaaagacgtc
ttcttcaacagcgccactgaggaaaaggatggtgaaagtgactatgagaacccaagcctg
gatgaggatgtagacagcagtgtggaggatctgctgagtttaagctgctccttcatagac
tcaaactattacaaaggccatcaaggggtacactctgtatcggctgccacagaaaccagc
cctcctaccctgggctttcccagtagatatagagacagtccccagcacagctcccagctc
catcccaatccacatccctattcatatccctatcaagagactgaaaacaaatccataccc
catcacactattgtggtcactcagttcaacccaaacctgttgcagtcaggcagtgccatg
gacggctataacagtgaatcggtggaccctgttgaccctgtgggtgtggtgaacactatg
gtgaatctgaatggaccaggaggacaaggagacatgatggattctgacagagagagcttc
cctatcctgatcaggtccatgtctacatcacgcagacacagcttgggcatgcccatgtct
cccatcgacttggggaggaggctgagcctggacgccatagacagcgatggagagagggat
gactctctcctaagcccctcccaccaacaggcctttatatacccaggatgccctgagcag
gaagtggaggagtcagatgggacagacctctccagatctgaagccaaggagacagaaacg
gaggagtgcagtcggtctggaaggacatactccagagcagagattctggccacagatgag
cgcgttcacgttgcacacgtgtctcgcgtggtggagacatctaagagggcagcaggagag
gagctggacccagaggaacccaacttgcacactgcagaaggacagactcatatagccagg
cagaggaccacaaggccagaggggaaggagacaggaagtagtgtcacctggtacgaattt
ctctccaacgaaaatgaggaagaggaggaccgaacagagaaagtagagaaggggaccaaa
gtgaagcgcaccctgagctcgcttaggagcagaatgactggctcattcaacaaagacaag
cagggtaagaaccgagagaaagagcagcagaaggggaaggagagggaacccaaagagaaa
gagaaactgcatcacagtagtagcagtgggcataatttggtgccaggctccttctccagc
tgtgccacctgctcactgtgcagtaaggccctgcagaaaaagcatggtctgcagtgcctg
aactgtgcagtgaacgttcacaagagttgtcggacgctactagctgagtgtaacagcagc
aagaacaagaaggattctctgcataagacctccacaacagcatcgctgaacctcgccctg
agtgatcgggaccagtcttcttcggcccttgattgccccccaggctctccgcgcatccca
ggcatgaccctcaccccgcggggacccagtgctcagcctgcctcagctgccttcaacagc
tcttcctccagccacactgctgcagccagcctcaaccacagccacaaccacagccacaac
agccgtaccggatccctctcaggggacatggatgaaccggacagcctgcgcttcggggtc
aagcgcttgaacgaggacgccgtctccctggccccttccaccactgactccatcgttgta
gaagatgcgtactactctgcatttcgagctgatctggagtctgatgcccaggacctggag
gtggagtcatggagtctggctgtggaccagcagtacctgaagaaatacaccaaggagatg
gtcaagagacaggacgttatctatgagctgattcagacagagatgcaccacgtgcggacc
ctgaagatcatgctgcgtgtgtacatgagggagctgaaggagcacctccaggtggacgag
ctgttcccgcgcctggagagcctgctggagctgcacacagacttcctgtcccgcctcaaa
gagcggcgccgagactccatgcagcccggcagcgacaggaactacaacatacaaagactc
gctgacatcctcaccacacagttttcaggtgagagaggggaccggatgaaggagaactat
ggtgatttctgcagccaccacaccgaggctgtcaactactacaaggagcaactacacaac
aacaggaagttccagagcctcatacggaaagtcaataatttgtccgttgtgagaagatta
ggagtgactgaatgtattctcctggtgacacaacgcgtcaccaagtaccctgtgctggtg
gaacgcattgtgcagaatacagaagtgggtacggaggaacacgaggagttgaccaggtct
ctgggtctgattaaagactgcatcgtgcaggtggatgccctggtcaacctgcatgagaag
gcctcgcgcctccgagacatcgcccacaagatggagcccaagtccctcggcaagatcaaa
gatggccgtgtgttccacagagaggacctggctcagggtcgacgcaggctactgcacgag
gggacggccaaccacaaggccgcctccggcagactcaaagatgttctggctgtgctgctg
tcagacgtgctattgttactccaagagaaggaccagagatatgtcttctccacagtggac
aacaagccctcagtgatctccctccagaagttgatagtgagggaggtggcccacgaggag
aaggccatgttcctgatctgcgcctcctccaatgagccggagatgtacgagatacacacc
gcctccaaggaggagcgcaactcctggatgacacacatccggcaggccgtggagagttgt
ccacacactgaggagagactcttcagtgagcaggaggaggctcgagctgccagattcaac
gagttccaagagcgtctgagccagaaggacacccagatcgtgacgatcctgacagagaag
ctgcagctgttttcagacatgtgtctggtgtctggtcatggggatatgaccttccgctcc
cacctaatgctgcgaggtgacgcctcagacctccaccagggggagacactgctcaagggg
accatcactgatgtggagagtcttcagaacctattgctgtctggtgtgagagagccagct
tcacgtctagaggagggttcagggtccggggctctgcccaggagagcagacaccttcggg
ggctatgacagcaggccaatcatcctcaacaagaaaggcattgtgaagaagaagaaccac
agtggaggggatatagccagagacgggacccagaaaggctgctctgacccccagcttacg
aagatccaggctagtcagaccctggagcagccacaggctgatgaggaggaggaggcctct
ccagccacctggaaccccatctggtccaacaccttccctgaggctgagttctttgaccgg
gtgctgatgctgtctcagagactctacagcctgcaggccatcgtcgccaagcaggacagc
cacatcgagctgcaacgggcctcactcaccgagcgcgcctccttccctggccgtcaccgc
ggcaacgttctcctggagcaggagaaacagaggacgctggccctgcagagggaggagctg
gccaccttccacaagctgcagtcacagcaccgtcaggagcaggctcgctgggagagggag
cgggaccgccaccagctgcaggccgaggccatggaggggatgctgaggcagagggaggag
gactgcaggaggctggaggagaagctggcggaagagagggaggacctggagagacagaga
gagacgtaccaacaggatctggagagactgagggagtcgacccgcacagtggagaaggag
aaggaacgcctcgagcagcagaggaagatcaagaggaagaccattgaggtgatgcccttc
actagcagtctaaatggggatctcctgctgggcgtgggcagtagcggcagcgtcggatca
gacctcaccctcccccagaaggtcctggttcgtcacagcccttctgtggcgcccgcagac
tacctggagcgtcctgaggttctggctcggggacagagtgccaacgccacggcgctgccg
gtgaagaaggaggtgcctctccacctgtgcagcaccaccaaccagcagcacaagcaggtg
ggcgtacagcagcagatccccaccaagctggcagccctgagctcaaaaagttcgaagagt
gccaaggccacccaccgcaccgacagcacagcctctctggatatgaagcaaatgctgcct
atgaagttgtcagccagagaggacggctctctgaaagccaagcgctccatcagccctaac
cagcagcttcctcacaccctagtccactcccagtccatgcacttgacagtttcattgagc
cctccagacagggggccagagaaccagcccgccagcctacagaagccccccagccaggcc
tccaaccccctgcacatccagccccaggctcctaaccccctacacaccaagagccctaac
ccctctccagcacaggcccctgtccacggccccagcctgccccctccatgcaggatctct
gaggatgtaatcttcttctga
DBGET
integrated database retrieval system
