Salmo trutta (river trout): 115158879
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Entry
115158879 CDS
T08542
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04145
Phagosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115158879
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115158879
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115158879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115158879
Enzymes [BR:
stru01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
115158879
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115158879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_30
AAA_16
Rad17
AAA_29
ABC_ATPase
Lectin_N
DUF3450
Motif
Other DBs
NCBI-GeneID:
115158879
NCBI-ProteinID:
XP_029564147
Ensembl:
ENSSTUG00000000280
LinkDB
All DBs
Position
2:complement(58755234..58766043)
Genome browser
AA seq
713 aa
AA seq
DB search
MARLKTYGLVLLYDLVLWGALWTGLVLLEFSSSGGLVGLWAFGALRWALHHSITLVLSDR
KPQQVLRRWVAVLCLLPPVFESGRMVMVPASTADDLGLVPGPSMVVLALVSSTVACLAWE
LGFPDDGGNQGKEKKKKQEARAQLMRVVRYCKPDALYLAAAFLFLSLAVICETFIPYYQG
KVIDTLRGQYQHNSFMYAIGGMGLVSLGSALCSGLRGGLFMCSLSRLNKRMRHMLFRNLV
QQDIPFFEENKPGSLASRLGNDVDKMGRSVALNSNVLVRSLVKTAGMLVLMLGLSWQLTL
LTMVEMPLLTLLQTKYNTYNQEFTKQLQDCQAQIKELASQAIGAVRTVRSFRAEEKELDR
YNQALERMYKVQEHKGIISAVHLLLRRMVTVGLKVAMLFLCRRLISAGQLSIGSVLAFVL
FQKDMVTNMKHLVYVFGDMLCTVGAAAKVFTFLDRKSDQKEAGELAPAKLQGKLAFHNVS
FYYPSRPNTPALKAVSLELHPGKMTALVGPSGGGKSSCVSLLARLYEPKEGQVLLDGQPL
HCYQHQYLHQKMALVSQEPVLFSGSIRHNIEYGLVGCTLEKVKEAAKSANVHDFICTLEQ
GYDTDVGECGGQLSSGQKQCIAIARALVREPQVLILDEATSGMDINTQHVVQGVLAGSVG
QTVLVVAHRLQTVEKADQIIFMEGGEVVEQGTHQELMASKGRYHRLKEELFED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttaaaaacatatgggctggtccttctctatgacctagtgctgtggggggca
ctgtggaccgggttagtgctacttgagttctccagtagtggaggactggtggggttatgg
gcctttggagccctaaggtgggcattgcaccactcaatcaccctggtgctttctgataga
aagccacagcaagtgctgaggagatgggtggcagtgctctgcctcttgcctcctgtgttt
gaaagtggacgtatggtcatggtgccggcatcgactgccgacgacctgggtctggtgcct
ggcccaagcatggtggtcttggccctggtatcctccactgtggcctgcctggcatgggag
ctgggcttccctgacgatggagggaaccaagggaaggagaagaagaagaaacaggaggcc
agggcacagttgatgagggtggtgcgatactgcaaaccagacgccctctacctggctgca
gccttcctcttcctcagcctggctgtcatctgtgagacgtttatcccttactaccagggg
aaggtcattgatacgctgaggggtcagtaccagcacaacagcttcatgtacgccattgga
ggcatgggactcgtctcactaggaagtgctctgtgctcaggcctgcgagggggcttgttc
atgtgtagcctgtccagactcaacaagaggatgagacacatgttgttccgcaacctggta
caacaggacatacccttctttgaggagaacaaaccaggaagccttgcctcccgcctcggc
aatgatgtggacaagatgggacgctctgtggctctgaacagtaatgtgctggttcgcagc
ctggtgaagacggctggtatgctggtcctgatgctgggcctgtcctggcagctcaccctg
ctcaccatggtggagatgcccctcctcaccctgctgcagaccaaatataacacatacaac
caggagttcactaagcagctgcaggactgccaggcccagatcaaggagctggcatcccag
gccattggggcggtgagaacggttcgcagcttcagagctgaggagaaggagctagatagg
tacaaccaagcactggagaggatgtacaaggtccaggagcacaagggcatcatcagtgcc
gtccaccttttactgagaaggatggtgacagtgggcctaaaggtggccatgctgttcctg
tgtcggaggctcatctcggctggccagctgagcattggcagtgtgctggctttcgtcctc
ttccagaaagacatggtgaccaatatgaagcatcttgtttatgtctttggagacatgctg
tgcactgtcggggcggcagccaaggtgttcacgtttctggacagaaagtcagatcagaaa
gaagcaggagagctggctcctgcaaagcttcaggggaaacttgctttccacaatgtcagc
ttctactatccctcacgcccaaatacacccgcactgaaggctgtgagtttggaactgcat
ccggggaagatgacagcgctggtggggccctctggtggcgggaagagctcctgcgtcagc
ctgctggcgaggttgtatgagcccaaggagggccaggtgctgctggatggacagcccctg
cactgctaccagcaccagtacctgcatcagaagatggccctggtgtcccaggaaccagtg
ctcttctctggatctatcagacacaacatagagtacggcctcgtgggatgcaccctggag
aaggtgaaagaggctgcgaagagcgccaacgtccacgactttatttgtacgctggaacag
ggctacgacacagacgtaggtgagtgtggagggcagctgtcttctggacagaagcagtgc
atcgccatcgccagagctctggttcgagagccacaggtcctaattctggacgaggcaacc
agcggcatggacatcaacacacagcatgtggtgcagggcgtcctggcaggctcagtgggc
cagacagtgttggtggtggcccaccggctgcagactgtggagaaggctgaccagatcatc
ttcatggagggcggggaggtggttgagcagggcacacaccaggagctcatggctagcaag
gggcgctaccatcggctcaaagaggaactctttgaggactga
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