Salmo trutta (river trout): 115158945
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Entry
115158945 CDS
T08542
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115158945 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115158945 (nwd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
NACHT
Beta-prop_WDR36-Utp21_1st
WHD_NWD1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
AAA_16
DUF4062
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
NPHP3_N
AAA_22
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_Aladin
NPHP3
Beta-prop_Vps41
Beta-prop_DCAF4
PROPPIN
AAA
AAA_25
Nucleoporin_N
ATPase_2
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Viral_helicase1
Beta-prop_WDR19_2nd
RuvB_N
AAA_11
AAA_30
nSTAND3
AAA_33
AAA_18
AAA_14
NTPase_1
AAA_28
RNA_helicase
cobW
AAA_17
Motif
Other DBs
NCBI-GeneID:
115158945
NCBI-ProteinID:
XP_029564244
LinkDB
All DBs
Position
22:11260030..11275150
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AA seq
1652 aa
AA seq
DB search
MASPRGALMEVLRGQSTEGLKLRSNVVRVFVSSTFTDMSSERNALLDKTYPELQAFCHSL
GLVFEVVDMRWGLQDAIAVDHMTTELCLLEIEACKKVSVGPSFIALLGNRYGHRPIPRVL
PGKQFEVLLSKLPQDQVGLLHQWFRKDNNAVPPVYVLQPITTLLPHYNDLQPERRPLQDD
SVISWRYTEARLLQLLRSAAVQAEEDGDITVEQKHQFFKSVAEHEIEEGLRMPDGDESEP
SAILFVRELPHLRKKDGPKRLAQYMDVTADGLLDTEAQDLLSGLKSRLFAASPGILNLHS
VELCKGAIEPSCKEHAQYLESLCEQLVSQTKARIARRVGAGSPVEAGTVRTNGATGGDAS
QRKGEEDRGWVLQELSHHMALSAGKCLGVFRGREGLLGKICLAMWEHTNTRHAPLVVHGP
PGVGKTTLLCKLAQEMRGLLDPRAVVVLRLLGTSAESSDLGRVLQSVCFQICSVFSLPPP
TPITAHTREDLVRFFHGLLAEVSERGDTLLLILDSLDQLSSATQGQKLHWLPKDIPPNVH
LVVSTTDTGSPVLANLRRTVEVPGNFFEVEPLSCDQGREIMNAYMREAQRSLTPEQCEVV
LCSFQLSGNPLHLKLLLDMARRWASYTTVTDLALSSSAQEVMSQLLQALEERHGKQLVGA
ALGYIVSARGSLSEAELRDILSLDNNVLAEVYQYWLPPNHSLIRLPPLLWVRLRHDLGEL
LVEGQANGVTVLGFHHKLLTETVRERYQRSEQQADRHRILAEYFLGSWSQGRFKAVLLPP
LKTTLDADRKVPPQPLWFAEGVANVKKLQELPYHLLHAGLWEELRQEVIGSSEWLYCKTL
TCGVASVIEDLTLCTELMDCPETQLIRDTFILLKPTLDFLDGQMDPSLFYTEVLARLHSF
AEMYPSLIGRLCCQCHDWLSCCPDPILVPKCTFLQPPGGALKTTLAGFQKGVTALDVCPE
RGLLLAGSEGGMVIAWDLNDLEVIQTLVGHTAKVLSVRVIDSGAHCLSLAADGTLRRWSL
LSGRQLYCTQEAVSINSLPSTTHIHVSEERALIFTHSGGQVKVWHLNTTELLFQVKDTGV
SIILGLLNGMVVSLSDGGLVTFSHPSAEDKTAQIHLENSSHSLTLTATLTLQKHGRLLIA
SKEGFLYQVSSTVQGRQSQWTLRQTVTELPVCATFLSASDDEGILLAGCERTLVLFHRES
DCVQSFLDLHHEDTVLCACVSSDSRVVVSGSEDQTIRVWSITTGNLLDFFLGMDAPVTTL
ALYEGTVVSASSSAYYLKLWHLPSPNDPQQRPKGCIPAGCPQVALTKDGDTVYYVRNVGQ
KEVITWNCHTGSSTDTMAVSAEVCCLELAQHKKLLFCGLTTGTVLIYPLAFPKETLCIPP
PENLPTVRCMAIGGQEKHMAVAYEDSVCLFEITTRDSFPSVEGPSARFALSLLHSPVSSM
ALLPDCRLLYGTACGEVTMYDFKSASTATLDSHRSRVNCVTTSNWGTHALVGSEDAVQRL
WGLTPLVLDHTMEYKGFLFEGVLCAAFSESDKHVFTGSQDRTIKVWDVASGSLLFVQYVY
APVTKMLTYRNGFVAISQLGYVIKEGFRCPDDVCPEYNPLRNVNAQYRVTSRQKSADSPH
SVITEIPEYNPAQFNFMALMLKSKPSHSCQLL
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccaagaggagcactgatggaggtgctcagaggccagtcaactgaaggactg
aagctcaggtccaacgtggtccgagtctttgtcagctccacatttacagatatgagcagt
gaaaggaatgccttattggacaaaacctatcctgaacttcaagctttttgtcacagtctg
ggcttagtgtttgaggttgtggatatgagatggggtctccaggatgcaattgctgtggac
cacatgaccacagaactgtgtcttctggaaatcgaggcttgcaagaaagtatccgtagga
ccaagtttcattgctctgctgggaaaccggtatggccaccgccctatcccccgtgtcctc
ccaggaaaacaatttgaggtgctgctgtccaagctaccacaggaccaggtggggcttctc
caccaatggttcaggaaagacaacaacgccgttccgcccgtctacgttcttcagccaatc
acaactctgttgccccactacaatgaccttcagcctgagagaaggccgctgcaggatgac
agtgtcatttcctggcgctacacagaggctcgattattgcagctcctacgctctgcggca
gtgcaggctgaagaagacggggatataactgttgaacaaaaacaccaattcttcaaatct
gtggcggagcatgagatagaagagggtctgcgaatgccagatggggacgagagtgagccc
tccgccatcctctttgtgcgggagctacctcacttgcgtaagaaggacggcccgaagcgg
ctggcccagtacatggatgtgacggctgatggcctgctggataccgaggctcaggacctc
ctctcgggtctcaagtcgcgtctcttcgctgcctcgccgggcatcctcaacctgcacagt
gtggagttgtgcaagggagccatcgagcccagctgcaaggagcatgcccagtacctggag
agcctctgcgagcagctcgtgtcccagacgaaggcccgcattgccaggagggttggtgct
ggttcgccagtggaggctggtacagtgaggaccaatggggcaacaggaggagatgcaagt
cagaggaagggggaagaggacagaggctgggtgctccaggagcttagtcaccacatggct
ttgagtgccgggaagtgtttgggcgtgtttcgtggcagggaggggctccttgggaagatc
tgcctggccatgtgggagcacaccaacacccgccacgcgcccctggtggtgcatggacca
ccgggtgtgggcaagacaacgctgctctgcaagctggcacaggagatgcgtggcctcctg
gaccccagggctgtggtggtgctcaggttgctggggacgtcggcagagagctccgacctg
ggccgtgtcctccagagtgtctgtttccagatctgctctgtgttcagtttgccacctccc
accccgataacagcacacacgcgtgaggacctggtgaggtttttccatggccttctagct
gaggtgtcggagcgaggagacacacttcttctcatactagactccctggaccaattgtcc
tcggccacccagggccagaaactccactggctacccaaagacatcccccccaatgtccat
ttggtggtgtccaccacagatacaggctctccagttttggctaaccttcggagaacagtc
gaggttcctggaaatttctttgaagtagaacccctatcatgtgaccagggtagagagatc
atgaatgcctacatgagggaagcgcaacgaagcctgactccagaacagtgtgaagtggta
ctgtgtagctttcagctgagtggaaatcctctgcatctgaagctactgctggacatggcc
aggcgatgggcgtcctataccaccgtgactgacctggctctgagcagcagtgcacaggaa
gtgatgtcacagctactccaggcccttgaggagaggcatgggaagcaactggtcggcgca
gctttgggatatatcgtttctgcgaggggtagtctatcagaggcagagctgcgtgatatc
ttgtcccttgataacaatgtcctggctgaagtctaccagtactggcttccccccaaccac
tccctcatccgcctcccccctctactgtgggtgcgcctcaggcacgacttgggagaactc
ctcgtggagggacaggccaatggcgtcacggtgctcggcttccaccacaagctgttgact
gaaactgtgcgagagaggtaccagaggtcagagcagcaggctgacagacacaggatcctt
gctgagtacttcttgggtagctggagccaaggccgattcaaagctgtcctcctacctcca
ctgaagaccacattggacgctgaccgcaaggtgccccctcagcccctgtggttcgctgaa
ggagtggcaaatgtcaagaagctgcaggagctgccctaccacctcctccacgcaggcctc
tgggaggagctgcgccaggaggtcattggcagtagtgagtggctgtactgtaagactctg
acctgtggcgtggccagtgtcattgaggacctgaccctctgcaccgagctcatggactgc
cccgagactcaactgatccgagacactttcattctcctcaagcccaccctggactttcta
gatggacagatggacccctccctcttctacacagaggtcttggccaggctccactccttc
gctgagatgtacccttcactgataggacgactctgctgccagtgtcacgactggctctca
tgctgtcccgaccccatcctggtccccaagtgcaccttcctccagcctccagggggagcg
ctaaagacaacgcttgctggtttccagaaaggggtcacagctctggatgtttgcccagag
agagggctcctgctggcaggctcagagggtgggatggtgattgcctgggacctcaatgat
ctagaggtcatccaaaccttagtgggacacacagctaaggtgctatcagtgagagtgatt
gacagcggtgctcactgtctctcattggctgctgacggcactctgaggaggtggagcctg
ctgagtggcaggcagctgtactgtacccaggaggcggtgtccattaactccttaccttcc
accacacacatccatgtgtccgaggagagggcgcttatcttcacccactctggaggccaa
gtgaaagtatggcatcttaacaccacagaactactcttccaagtcaaagataccggtgtc
tccattattcttgggttattgaacggaatggtcgtctccctctcagacggaggacttgtc
acattttcccacccgtccgccgaggacaagacagcgcagatacatttggaaaactcttca
catagtttgaccctgacggcaacccttacactgcaaaaacatggccgactacttatagca
tcaaaggagggcttcctctatcaggtttccagcactgtacagggcagacagtcacagtgg
actctgagacagacagtcacagagcttccagtctgtgcaaccttcctctctgcctcagat
gacgaagggatacttttggcaggctgtgagaggacactggtccttttccatagagagtca
gactgtgtccagagcttcctggatctgcaccatgaggacacggtgttgtgtgcctgtgtg
tcgagcgacagcagagtggtcgtctcaggctctgaggaccagacaatacgggtgtggtct
ataaccacgggaaacctccttgactttttccttggcatggatgcgcctgtcaccactctg
gctctgtatgagggcactgtcgtctcagcctcctcctcagcctactacctgaagctgtgg
catctgccctcacccaacgaccctcagcagagacccaaaggctgcattccagccggatgc
cctcaggttgccctcactaaagatggcgacacggtgtactatgttagaaatgtaggccag
aaagaagtgattacatggaattgtcacacaggctcttccactgacaccatggccgtctct
gctgaggtgtgctgcctagagctggcccagcacaagaaactcctcttctgtggcctcacg
actggcacggtcctcatctaccccctagccttccccaaagagaccctgtgcatcccacct
cctgagaacctgcccacggtgcgctgcatggccatcggcggccaggagaagcacatggcc
gtggcctacgaggactcagtgtgtctgttcgagatcacgaccagggacagtttccccagc
gtggaggggccctccgcgaggtttgccctctccctgctccactcacccgtctcctccatg
gccctgcttccagactgtaggctgctgtacgggacagcctgcggggaggtcaccatgtac
gacttcaagtccgcctcaaccgccaccctggatagccaccgcagcagggtcaactgcgtg
acgaccagcaactgggggacgcacgccctagtgggctcagaggacgccgtgcagaggctg
tgggggctgacccccctggtgctggatcacaccatggagtacaaggggttcttgtttgaa
ggggttctctgtgcagcgttctctgagagtgacaagcacgtcttcactggatcacaggat
agaactattaaagtctgggatgttgctagtgggagtctgttattcgtccagtacgtctac
gctcctgtcaccaaaatgttgacctacaggaatggcttcgtggcaatctcccagctgggc
tacgtcatcaaggaaggattccgctgtccggatgacgtctgtccggaatacaacccactc
cggaacgtcaacgcacagtacagggtcacgtcccggcagaagagtgcagacagccctcac
agcgtcatcacagagatccctgagtacaatcctgctcagtttaacttcatggccctgatg
ctcaagagcaaaccctctcactcatgccagctgttgtaa
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