Salmo trutta (river trout): 115159117
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Entry
115159117 CDS
T08542
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115159117
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
115159117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
115159117
NCBI-ProteinID:
XP_029564406
Ensembl:
ENSSTUG00000004838
LinkDB
All DBs
Position
23:complement(4281325..4349568)
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AA seq
1441 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEEPFHIQPNSQRFYFAVLSETQLSIWFSRPSVLIVSYVESVK
AAAQFGFYQQAEWKPDDSMIAVAAANGYILMFDVVGGGEDKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKRPIDLEAPITSIKSLQEDLLVSTADGYLHILHWDGVSNGRKAISL
CTVPFSLDLQSARGGPSLDLEGLYVRDMEYCVTLDGFAVVLDDGRLGFISPVASRFTAEQ
LQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYMIDTTTGSMQLSHKLELTPKHFPD
VWNKTGAVTLIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPIK
ISSMCWGAEGYHLWVITSKEEAELVENMEEAPPPTQTKQAGILQFHFIKSALTVNPCTSN
QEQVLLHGEDRLYLTCGDPTQVPSSSSDGPHPHNLAHGLEGSPLHHRSAPSPNSISQGLS
TLLGHKHWHVVQIHCTYLESNWPIRFAAIDTAGQCIAVAGRRGFAHYSMSSRKWKLFGNI
TQEQNMTVTGGLAWWKDFVVVACYNFIDQQEELRLYLRSSNLDNAFASVAKLHSDTLLLN
VFRDLIVLFRADCSICLYSIERRHDGPNPSACVELLQEVSMSRYIPHPALVVSVTLTSVR
TETGIALKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVREKEDQKKLLPFCPPVVLAQC
VENVWTTCRSNKKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINI
YPLAVLFEDALVLGASNETVLYDGLQGPREGREPLEVMFPYCTVERTSQIYLHHILRQLL
VRNLGEQALLLAQSCAGLPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPL
FLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSR
QHATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMETPPPTPTTQEPSSTGGFEFFRNRSI
SLSQSADSIPAGKFNLQKTFSMPSGPSTKGSERWSKDSDCAENMYIDMMLWRHARHLLEQ
VRLKDLGCFSAQLGFELIGWLCRERTRVARVDDFVMALKCLHKDFLWPFPVIPACSISSP
FKNGHRKTVLSQRLLKSQSADSLLNSDMDTAPPQASARNSNHTWLDGLGALGPEPKEMNT
TSSHGGPQTQEAFLSPLTNKTEECSIGSATDLTETSSMVDGDWTMVDENFSTLSLTQSEL
EHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILREVTVIKQVVNFLDSPEV
PPETVKSIRSGLLGVDAWASTDCLGYKPFLNLIRPQLQKLIETAVEQVQPEAFQPGASNP
NSKLTEPQPGCPRAEDSRGPAPLGLALPLEPSGGLVTEDGGAPEEQEEQAADEGAYDCTL
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaactggctggccccggaggctactttgtccactgaaaagtgaagaggaa
ccgtttcatattcagcccaactcacagaggttttacttcgctgtgttgtcagagactcaa
ctaagcatctggtttagtcggcccagtgttctgatagtgagctacgtcgagtcagtgaag
gcagcagcccagtttggcttctatcagcaggccgaatggaagccggacgattccatgata
gcagtggcggctgccaatggctacatcctcatgtttgacgtggtgggaggaggagaggac
aagtatctttatgagccagtctatcccaaagggagtccacgtgtcaaggtcaccccaggt
tataaagaggagcagtgtgcccctgctctcagcctggagatgaagagacccatagatctg
gaggctcccatcaccagtattaagtctcttcaggaggacttgttggtgtctacagctgat
ggctacctccacatcctccactgggacggagtcagcaacggccggaaggctatcagtctc
tgcaccgtccccttctccctggaccttcagtcagcacgcggtggtccgtccctggatctg
gaggggctgtacgtcagagacatggagtactgtgtgactctggatggctttgctgtggtg
cttgacgacgggaggctgggattcatcagtcctgtagccagcaggtttactgcggaacag
ctgcagggcgtctgggcagcagatgtaacagacggcacgtgtgtggcggtcaacaataag
tacaggctgatggcgttcggttgtgccagtggctcagtattggtgtacatgattgacacc
actacaggatccatgcagctctcccacaagctggagctcaccccaaaacacttccccgac
gtgtggaacaagacgggcgcggtgacgctgatccgctggtcccccgactacagcgttgcc
atggtgacctgggagtgcggcgggctgtctttgtggagcgtgttcggagcgcacctcatc
tgtacgctcggggaggactttgcgtatcggtcagacggcactaaaaaggatcctataaag
atcagctctatgtgctggggagcagaaggctaccacctgtgggtcatcaccagtaaagag
gaagcggagcttgtagagaacatggaggaggctccacctcctacccagaccaagcaggcg
ggaatactgcagttccacttcatcaaaagcgccctcaccgttaatccctgcacgagtaac
caggagcaggttttactacatggggaagaccgtctgtacctgacgtgtggtgaccccacc
caagtcccatccagcagctcagatggccctcacccccataacctcgcccatggcctggag
ggcagcccccttcaccaccgctccgccccctcacccaactccatctctcagggactcagc
actttactgggacacaagcactggcacgtggtccagattcactgcacatacctagagagc
aattggcctatacggtttgcagccatagacacagcgggccagtgcatagcggtggcaggg
agacgtggatttgcacattactccatgtcctccaggaaatggaagctgtttgggaacatc
actcaggagcagaacatgaccgtgaccggggggctggcctggtggaaggactttgttgtt
gttgcgtgttacaatttcatcgaccagcaagaagagctgcgtctgtacctccggtcgtcc
aacctggacaatgccttcgcctccgtcgccaagctgcactcggacactctgctgctcaat
gtgttcagagacctgatcgtcctgttcagagcagactgctccatctgcctctacagcatc
gagaggagacacgacgggcccaacccgtcagcctgtgttgagctgcttcaggaggtgtcc
atgtcccgctacatcccccatcctgccctggtggtgtccgtcaccctcacctcggtacgc
acagagaccggcatcgcgctcaaagccccacagcaggcctgtatggcagagagcatcatg
ctgaacctggctggccaactcatcatgctacagagagaccgttctggaccacaggtacga
gagaaggaagaccagaagaaactgctgccgttctgtcctcccgtggttctggctcagtgt
gtagagaacgtgtggacgacctgtcgcagcaacaagaagaagcgccacctgctggaggct
ctgtggctgtcctgtggcgaggccggaatgaaggtgtggctgcccctgttcccgcgggac
caccgtaagccccactcgttcctgtcccggcgcatcatgctccccttccacatcaacatc
taccccctggccgtgctgtttgaagacgccctggtgctgggggcatctaatgagaccgtg
ctctacgacggcctgcagggtcccagagagggccgggagcctcttgaggtgatgttccct
tactgcacggtggagaggacctcccagatctacctccaccacatcctgcgtcagctacta
gtgcggaacctgggagagcaggccctgctcctggcccagtcctgcgcagggctcccctac
ttcccccacgtcatggagctcatggtccacgtggtgctggaggaggaggccacatcccgg
gagcccatccccgacccgctgctgcccaccgtggccaagttcatcaccgagttccccctg
ttcctccagaccatcgtgcactgcgccaggaagacggagtacgccctgtggaactacctg
tttgctgccgtgggcaaccccaaggatctgtttgaggaatgtctgatggctcaggacctg
gatacagcagcatcctatctcatcatactgcagaacatggaggttccagcggtgagcagg
cagcacgctacactgctcttcaacacggctctggagcagggcaagtgggacctctgtcgt
cacatgatccgattcctcaaggccattggctctggggagatggagaccccgcctccaaca
ccaaccactcaggaacccagttccacgggaggcttcgagttcttcaggaaccgcagcatc
agtctgtcccagtcagcggacagcatccccgctgggaagtttaacctacagaagaccttc
agcatgccctctgggccctccactaaagggtccgagcgctggagtaaggacagtgactgt
gctgagaacatgtacatagacatgatgttatggcgtcacgcccggcacctcctggagcag
gtccgcctcaaagacctgggctgcttctccgcccagctgggcttcgagctgattggctgg
ctgtgccgggagcgcactcgggtggcgcgggtcgatgactttgtcatggcgctgaagtgt
ctccacaaggacttcctgtggccgtttcctgtcatcccagcatgctcgatcagctcgccc
ttcaagaacggacaccgcaagacggtgctgagccagcggctgctaaagtcccagtcagca
gacagcctgttgaacagcgacatggacacagcgcccccgcaggcctcagcacgcaacagc
aaccacacctggctggacggtctaggggcactggggccggagcctaaagagatgaacaca
acctcttcccacggggggccacagacacaggaggccttcctctctccactcactaacaaa
acggaggagtgcagtatcggttcggccacagacctgacagagaccagcagcatggtggat
ggagactggaccatggtggatgagaacttctccactctgagtctgacccagtctgagctg
gaacacatctccatggagctggctaacaaggggcctcacaagtcccaggtccagctacgc
tacctgctgcatgtgttcatggaggcgggctgtctggagtggtgtgttgtgattggtctg
atcctgagagaggtcacggtcatcaagcaggtggtcaacttcctggacagcccagaggtt
cctcctgagaccgtcaaaagtatccgctccggcctgctgggagtcgatgcgtgggcctcc
acagactgcctgggctataaacccttcctgaacctgatccggccccagctgcagaagcta
atagagactgctgtggagcaggtccagcctgaagccttccaaccaggggcttccaacccc
aactccaagctgactgagccccagcccggatgccccagggcagaggacagtagagggcct
gctcccttgggcctggccctgcccttggagccctctggagggttagtgacagaggacgga
ggagctccagaggagcaggaggagcaggcggcagacgagggggcatatgactgcacccta
tcctga
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integrated database retrieval system
